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How much do director automation jobs pay per year?

As of Sep 2, 2026, the average yearly pay for director automation in the United States is $116,607.00, according to ZipRecruiter salary data. Most workers in this role earn between $91,500.00 and $139,000.00 per year, depending on experience, location, and employer.

What does a director of automation do?

A Director of Automation oversees the strategy, implementation, and management of automation solutions within an organization. Their responsibilities typically include identifying processes that can be automated, leading teams to design and deploy automation technologies, and ensuring projects align with business goals. They work closely with departments such as IT, operations, and business units to drive efficiency, reduce costs, and improve productivity. This role often requires staying up to date on the latest automation tools and best practices, as well as strong leadership and project management skills.

What are the key skills and qualifications needed to thrive as a director of automation, and why are they important?

To thrive as a Director of Automation, you need deep expertise in automation technologies, process optimization, and a relevant degree in engineering or computer science. Familiarity with tools like PLCs, SCADA systems, robotics platforms, and certifications such as PMP or Six Sigma are commonly required. Leadership, strategic thinking, and strong communication are crucial soft skills for managing teams and driving cross-departmental initiatives. These skills ensure efficient project delivery, innovation, and alignment with organizational goals in rapidly evolving technical environments.

What are some common challenges faced by a director of automation, and how can they be addressed?

Directors of Automation often face challenges such as integrating new technologies with legacy systems, managing cross-functional teams, and ensuring that automation initiatives align with business goals. Overcoming these challenges requires strong project management skills, clear communication with stakeholders, and ongoing training for team members. Building collaborative relationships with IT, engineering, and operations teams also helps in smoothly deploying automation solutions and measuring their impact.
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Director Automation jobs near you
Infographic showing various Director Automation job openings in the United States as of August 2026, with employment types broken down into 95% Full Time, and 5% Contract. Highlights an 79% In-person, and 21% Remote job distribution, with an average salary of $116,607 per year, or $56.1 per hour.

Director, Automation and Screening

Protagonist Therapeutics Inc.

Newark, CA • On-site

$200K - $230K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 4 days ago

Job description

Director, Automation & Screening
About Us
Protagonist Therapeutics is a discovery-through-late-stage development biopharmaceutical company with a proprietary technology platform that enables de novo discovery of peptide therapeutics. Two novel peptides derived from Protagonist's proprietary discovery platform are at or near commercialization. ICOTYDE™ (icotrokinra), licensed to Johnson & Johnson company Janssen Biotech, Inc., is the first and only targeted oral peptide that precisely blocks the Interleukin-23 receptor. ICOTYDE was launched in the U.S. in March 2026, is approved for the treatment of moderate-to-severe plaque psoriasis in adults and pediatric patients 12 years of age or older and is in Phase 3 development for psoriatic arthritis, ulcerative colitis and Crohn's disease. ICOTYDE was jointly discovered by Protagonist and Johnson & Johnson scientists, with Protagonist having primary responsibility for the development of ICOTYDE through Phase 1, and Johnson & Johnson assuming responsibility for further development and commercialization. Protagonist also discovered and led development through Phase 3 of rusfertide, a first-in-class hepcidin mimetic peptide licensed to Takeda Pharmaceuticals. An NDA for rusfertide for the treatment of polycythemia vera is under priority review with the FDA. The Company also has a number of clinical and preclinical programs addressing clinically and commercially validated targets, including an oral IL-17 antagonist peptide, obesity dual and triple agonists, an oral hepcidin functional mimetic, and the recently announced IL-4 and amylin programs.
More information on Protagonist, its pipeline drug candidates, and clinical studies can be found on the Company's website at https://www.protagonist-inc.com.
Position Summary
We are seeking a highly motivated and experienced individual to lead our new Screening and Automation team within the Biology and Translational Science unit. This is a leadership role where you will be responsible for building and managing a team dedicated to developing and implementing automated screening and functional assays. This role will report to the VP of Biology and Translational Sciences and work closely with the biology, chemistry, and pharmacology teams to drive pipeline growth. The Director of Screening and Automation will play a critical role in our drug discovery efforts by scaling screening, target engagement assays, and driving the adoption of new automation technologies.
We are committed to a thriving in-office culture. This role requires being on-site at our office in Newark, CA 4 days a week.
Responsibilities
  • Recruit, manage, and mentor a team of scientists and technicians
  • Foster a collaborative and innovative team environment
  • Develop and execute a comprehensive strategy for laboratory automation to support our drug discovery pipeline
  • Identify and implement new automation technologies and workflows to increase efficiency and capacity
  • Oversee the design, development, and execution of screening campaigns
  • Ensure the quality and reliability of screening data
  • Lead the adaptation and scaling of cell-based and biochemical assays for automated platforms, including target engagement assays
  • Work closely with other teams in Discovery to support their automation needs and ensure seamless project execution
  • Be responsible for the maintenance and performance of all screening and automation equipment
  • Develop and maintain standard operating procedures (SOPs) and ensure compliance with all relevant regulations

Required Skills & Qualifications
  • A Ph.d. in a relevant field such as biology, biochemistry, or engineering is required
  • A minimum of 10 years of experience in the pharmaceutical or biotechnology industry, with at least 5 years in a leadership role
  • Extensive hands-on experience with laboratory automation, including liquid handlers, robotic systems, and high-throughput screening instrumentation
  • Proficiency in developing and optimizing a variety of cell-based and biochemical assays
  • Experience with data analysis and visualization software
  • Proven ability to lead and develop a team of scientists
  • Excellent communication and interpersonal skills, with the ability to collaborate effectively across different teams and disciplines
  • Experience with acoustic liquid handling, high-content imaging, and other advanced screening technologies is highly desirable
  • Familiarity with Laboratory Information Management Systems (LIMS) and large-scale data management
  • Experience managing relationships with external vendors and contract research organizations (CROs)
  • A demonstrated track record of implementing novel automation platforms and workflows that have significantly impacted drug discovery programs

Pay Range
The base pay range for this position at commencement of employment is expected to be between $200,000 and $230,000/year; however, base pay offered may vary depending on multiple individualized factors, including market location, job-related knowledge, skills, and experience.
Benefits
A top priority for Protagonist Therapeutics, Inc. is to provide a robust and comprehensive health and wellness program for our employees and their families. We offer a variety of high-quality coverage and benefit options.
  • Health Care benefits. Protagonist covers 100% of the premium cost for medical, dental, and vision coverage for all full-time employees and their dependents.
  • Flexible Spending Accounts - Healthcare FSA, Dependent Care FSA, Commuter Benefits
  • 401(k) Plan
  • Flexible Vacation Policy
  • Life Insurance (Basic, Voluntary & AD&D)
  • Short Term & Long Term Disability
  • Company paid lunch and snacks

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