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Payroll Systems Analyst Jobs in Rochester, NY (NOW HIRING)

Augmentis

Staff Accountant

Pittsford, NY

$65K - $80K/yr

... between payroll systems and the general ledger. Process Improvement * Proactively identify ... Strong analytical and problem-solving skills, with a high degree of accuracy and attention to ...

Augmentis

Staff Accountant

Rochester, NY

$65K - $80K/yr

... between payroll systems and the general ledger. Process Improvement * Proactively identify ... Strong analytical and problem-solving skills, with a high degree of accuracy and attention to ...

Augmentis

Staff Accountant

Rochester, NY

$65K - $80K/yr

... between payroll systems and the general ledger. Process Improvement * Proactively identify ... Strong analytical and problem-solving skills, with a high degree of accuracy and attention to ...

Augmentis

Staff Accountant

Rochester, NY

$65K - $80K/yr

... between payroll systems and the general ledger. Process Improvement * Proactively identify ... Strong analytical and problem-solving skills, with a high degree of accuracy and attention to ...

Augmentis

Staff Accountant

Pittsford, NY

$65K - $80K/yr

... between payroll systems and the general ledger. Process Improvement * Proactively identify ... Strong analytical and problem-solving skills, with a high degree of accuracy and attention to ...

Augmentis

Staff Accountant

Victor, NY

$65K - $80K/yr

... between payroll systems and the general ledger. Process Improvement * Proactively identify ... Strong analytical and problem-solving skills, with a high degree of accuracy and attention to ...

Mindex

Reports Developer (Power BI) - Remote

Rochester, NY · Remote

$70K - $120K/yr

Analyze existing Informer reports to understand business logic, data sources, and intended use ... Experience with HRP (HR/Payroll) systems or HR data models. * Experience integrating AI tools into ...

Paychex

HubSpot Systems Administrator

Rochester, NY · On-site +1

$127K - $199K/yr

Paychex is reimagining how businesses manage their workforce by bringing payroll, HR, benefits, and ... Requirements Analysis - Preferred * Simulations - Preferred * MATLAB - Preferred Compensation In ...

Paychex

Systems Engineer II

Webster, NY · On-site

Paychex is reimagining how businesses manage their workforce by bringing payroll, HR, benefits, and ... Is proactive and reactive for problem alerting, analysis, resolution, and follow up to ensure ...

Paychex

Revenue Operations Analyst

Rochester, NY · On-site +1

$62K - $97K/yr

Paychex is reimagining how businesses manage their workforce by bringing payroll, HR, benefits, and ... Analyst will work to integrate business objectives and system functionality. This role is ...

Paychex

Revenue Operations Analyst

Rochester, NY · On-site

$62K - $97K/yr

Paychex is reimagining how businesses manage their workforce by bringing payroll, HR, benefits, and ... Analyst will work to integrate business objectives and system functionality. This role is ...

Paychex

Revenue Operations Analyst

Rochester, NY · On-site

$62K - $97K/yr

Paychex is reimagining how businesses manage their workforce by bringing payroll, HR, benefits, and ... Analyst will work to integrate business objectives and system functionality. This role is ...

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Showing results 21-40

All JobsPayroll Systems Analyst JobsPayroll Systems Analyst Jobs in Rochester, NY

Payroll Systems Analyst information

See Rochester, NY salary details

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How much do payroll systems analyst jobs pay per hour?

As of Aug 18, 2026, the average hourly pay for payroll systems analyst in Rochester, NY is $33.59, according to ZipRecruiter salary data. Most workers in this role earn between $26.35 and $37.26 per hour, depending on experience, location, and employer.

What does a payroll systems analyst do?

A Payroll Systems Analyst is responsible for managing, analyzing, and improving payroll software and systems within an organization. They ensure payroll processes are accurate, efficient, and compliant with regulations by configuring system settings, troubleshooting issues, and collaborating with HR and finance teams. Their role often includes testing new system features, providing user support, and implementing updates to keep payroll operations running smoothly.

How does a payroll systems analyst typically interact with HR and Finance teams during payroll cycles?

A Payroll Systems Analyst plays a key collaborative role, working closely with both HR and Finance teams to ensure accurate and timely payroll processing. They gather and validate employee data from HR, troubleshoot discrepancies, and configure payroll system settings based on policy changes. Throughout the payroll cycle, they coordinate with Finance to reconcile payroll records, address compliance issues, and support audits. Strong communication and problem-solving skills are essential, as the analyst often serves as a bridge between technical system requirements and departmental needs.

What are the key skills and qualifications needed to thrive as a payroll systems analyst, and why are they important?

To thrive as a Payroll Systems Analyst, you need expertise in payroll processing, data analysis, and a solid understanding of HR and finance principles, typically supported by a bachelor’s degree in business, finance, or information systems. Familiarity with payroll software (such as ADP, SAP, or Workday), Excel, and relevant certifications like FPC or CPP are highly valued. Strong problem-solving skills, attention to detail, and effective communication abilities help ensure accurate payroll operations and successful collaboration across departments. These skills are crucial for maintaining compliance, preventing payroll errors, and optimizing system performance within organizations.

What is the difference between Payroll Systems Analyst vs Payroll Specialist?

AspectPayroll Systems AnalystPayroll Specialist
Primary FocusAnalyzing and optimizing payroll software and systemsProcessing payroll and ensuring accurate employee payments
Required SkillsTechnical skills, system troubleshooting, data analysisPayroll processing, compliance, attention to detail
CertificationsPayroll certifications, HRIS system trainingPayroll certification, tax compliance training
Work EnvironmentIT departments, HR teams, payroll software vendorsHR departments, accounting teams, payroll departments

While Payroll Systems Analysts focus on managing and improving payroll software systems, Payroll Specialists handle the day-to-day payroll processing and employee payments. Both roles require payroll knowledge, but the analyst role emphasizes technical system expertise, whereas the specialist role emphasizes payroll administration and compliance.

What are the most commonly searched types of Payroll Systems Analyst jobs in Rochester, NY?

The most popular types of Payroll Systems Analyst jobs in Rochester, NY are:

What are popular job titles related to Payroll Systems Analyst jobs in Rochester, NY?

For Payroll Systems Analyst jobs in Rochester, NY, the most frequently searched job titles are:

What job categories do people searching Payroll Systems Analyst jobs in Rochester, NY look for?

The top searched job categories for Payroll Systems Analyst jobs in Rochester, NY are:

What cities near Rochester, NY are hiring for Payroll Systems Analyst jobs?

Cities near Rochester, NY with the most Payroll Systems Analyst job openings:

Payroll Systems Analyst jobs near you
Infographic showing various Payroll Systems Analyst job openings in Rochester, NY as of August 2026, with employment types broken down into 85% Full Time, 9% Part Time, 5% Contract, and 1% Nights. Highlights an 89% Physical, 3% Hybrid, and 8% Remote job distribution, with an average salary of $69,859 per year, or $33.6 per hour.

Staff Accountant

Augmentis

Pittsford, NY

$65K - $80K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 5 days ago

Job description

Our client, a leading manufacturer of aero engines and industrial gas turbine components, is a globally recognized public company with a remarkable 75-year history of growth and innovation. Renowned in the aerospace industry, it offers an exceptional company culture that fosters development and provides diverse opportunities. Forbes has honored it as one of the World's Best Employers, highlighting its commitment to excellence and inclusivity.

Company Description & Perks:

  • Publicly traded company on a path of continuous growth, recognized by Forbes as a top global employer
  • This position is eligible for a $1,000 sign-on bonus
  • Exceptional insurance coverage and 401(k) matching program (9%), effective upon hire
  • Employer contribution to your Retirement Savings Plan account each pay period
  • Vibrant company culture and collaborative team environment
  • Access to excellent training programs for professional development
  • Free fitness center membership
  • Be at the forefront of innovation, applying machine learning to aerospace manufacturing
  • Collaborate with a supportive, cutting-edge team dedicated to solving challenging real-world problems

Our client is seeking a detail-oriented and motivated Staff Accountant. This is a hands-on role embedded within a collaborative accounting and finance team, offering meaningful day-to-day ownership of core general accounting functions.

The Staff Accountant will be responsible for the execution of general ledger activities, month-end close, and financial reporting, while also serving as a key backup resource to the Senior Financial Analyst on inventory accounting, standard cost analysis, and forecasting activities. This position is ideally suited for a manufacturing-focused accountant eager to deepen their technical skill set and grow in a structured, process-driven environment.

Key Responsibilities

General Ledger & Month-End Close

  • Prepare and post journal entries to ensure the accuracy and completeness of the general ledger monthly.
  • Perform balance sheet account reconciliations, identifying and resolving reconciling items in a timely manner.
  • Support the monthly close process, coordinating with cross-functional stakeholders to meet established close deadlines.
  • Assist with balance sheet reviews and internal/external audit requests, providing supporting documentation and analysis as needed.

Financial Reporting & Analysis

  • Prepare and distribute daily, weekly, and monthly financial reports to management and relevant business partners.
  • Perform PAE (Pre-Authorized Expenditure) and GASE (General and Specific Expense) variance analysis, communicating findings and trends to the finance team.
  • Support the Senior Financial Analyst with inventory-related reporting, standard cost revisions, and periodic forecasting activities.
Accounts Receivable & Credit Management
  • Monitor and actively manage the accounts receivable aging, proactively following up on past-due balances to support healthy cash flow.
  • Process credit memos and Return Merchandise Authorization (RMA) transactions accurately and in accordance with established policies.
Inventory & Manufacturing Accounting
  • Coordinate and maintain the revert/scrap scheduling and tracking process, including preparation and issuance of related invoices.
  • Assist with standard cost system updates and reconciliation of inventory-related accounts to the general ledger.
Payroll Reconciliation
  • Complete weekly and bi-monthly payroll reconciliations, ensuring data integrity between payroll systems and the general ledger.
Process Improvement
  • Proactively identify opportunities to streamline, automate, or otherwise improve accounting processes and internal controls.
  • Partner with IT and operations teams to evaluate and implement system enhancements supporting the accounting function.

Qualifications

Basic Qualifications

  • Bachelor's degree in Business Administration with a concentration in Accounting or Finance required.
  • Minimum of 2-3 years of accounting experience in a manufacturing environment.
  • Working knowledge of U.S. GAAP and its application within a manufacturing or cost accounting context.
  • Proficiency in Microsoft Office Suite, with strong Excel skills (pivot tables, VLOOKUP, data analysis).
Preferred Qualifications
  • 2-3 years of direct exposure to standard cost accounting systems within manufacturing or aerospace.
  • Experience with ERP systems, particularly QAD, Oracle, or Hyperion; Visual Manufacturing Software experience is a plus.
  • Familiarity with aerospace industry accounting standards and practices.

Core Competencies

  • Strong analytical and problem-solving skills, with a high degree of accuracy and attention to detail.
  • Excellent written and verbal communication skills; ability to present financial information clearly to non-financial stakeholders.
  • Self-motivated, with the ability to operate both as an independent contributor and as a collaborative team member.
  • Adaptable and intellectually curious, with a demonstrated desire for continuous learning and professional development.
  • Ownership mindset, taking personal accountability for deliverables, deadlines, and the accuracy of work product.

Compensation & Benefits

Our client offers a competitive total rewards package designed to attract and retain top talent:

  • $1,000 Sign-On Bonus for qualified candidates
  • 5% Annual Target Performance Bonus
  • Comprehensive Benefits effective Day 1 of employment:
  • Medical, Prescription Drug, Dental, and Vision coverage
  • 401(k) Retirement Savings Plan:
    • 6% company match, plus an additional 3% company contribution regardless of employee participation, for a maximum total company contribution of 9% annually
  • Paid Time Off (PTO) plus 11 paid company holidays per year
  • Employee Life Insurance
  • Employee Assistance Program (EAP)
  • Paid Parental Leave, up to 3 weeks at 100% pay for the birth or adoption of a child
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About Augmentis
Augmentis is a specialized recruiting firm focused on accounting, finance, procurement, and engineering talent across the U.S. We partner with growthoriented companies to match highimpact professionals with meaningful roles.

To learn more about Augmentis, visit our website: www.augment-is.com

Representation/employer clarification:

Augmentis is conducting this search on behalf of our client. The selected candidate will be employed directly by our client, not by Augmentis.

EEO + disclaimer

Our client and Augmentis are Equal Opportunity Employers. All qualified applicants will receive consideration without regard to race, color, religion, sex, national origin, age, disability, veteran status, or any other protected characteristic. This job posting does not constitute a contract or guarantee of employment, and role details are subject to change based on our clients' needs. By applying, you acknowledge that your information may be shared with our client for recruitment and hiring.