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Biotech Software Engineer Jobs in California (NOW HIRING)

Benchling

Software Engineer, Agents

San Francisco, CA · On-site

$173K - $234K/yr

We are rebuilding biotech for the AI era. When a breakthrough is delayed, the world waits. Getting ... QUALIFICATIONS * 2+ years of professional software engineering experience , building and ...

Danaher

Systems Software Engineer

San Diego, CA · On-site

$84K - $120K/yr

... biotechnology? AtLeica Biosystems, one ofDanaher's15+ operating companies, our work saves lives-and ... The Software Systems Engineer for Leica Biosystems is responsible for system-level software ...

Danaher

Systems Software Engineer

Vista, CA · On-site

$84K - $120K/yr

... biotechnology? AtLeica Biosystems, one ofDanaher's15+ operating companies, our work saves lives-and ... The Software Systems Engineer for Leica Biosystems is responsible for system-level software ...

Danaher

Systems Software Engineer

Carlsbad, CA

$84K - $120K/yr

... biotechnology? AtLeica Biosystems, one ofDanaher's15+ operating companies, our work saves lives-and ... The Software Systems Engineer for Leica Biosystems is responsible for system-level software ...

ImmunityBio

Software Engineer, AI

Culver City, CA

IBRX) is a commercial-stage biotechnology company developing cell and immunotherapy products that ... The Software Engineer - AI will contribute to AI agent development and collaborate with cross ...

Amgen

Principal Software Engineer

Thousand Oaks, CA

$141K - $190K/yr

Since 1980, we've helped pioneer the world of biotech in our fight against the world's toughest ... Principal Software Engineer What you will do Let's do this. Let's change the world. In this vital ...

Danaher

Systems Software Engineer

Vista, CA · On-site

$84K - $120K/yr

... and biotechnology? At Leica Biosystems, one of Danaher's 15+ operating companies, our work saves ... The Software Systems Engineer for Leica Biosystems is responsible for system-level software ...

3 Key Consulting

$60 - $80/hr

Automation Senior Software Engineer, Biotech, DSC, SCADA HMI, PLC - (JP14368) Location: Thousand Oaks, CA. Employment Type: Contract Business Unit: Advanced Technology and Automation Duration: 3 ...

Neomorph, Inc.

Principal Software Engineer

San Diego, CA · On-site

$143K - $192K/yr

Overview The Principal Software Engineer is a senior individual contributor responsible for ... Experience in biotech, data-intensive, or scientific environments * Familiarity with scientific ...

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All JobsBiotech Software Engineer JobsBiotech Software Engineer Jobs in California

Biotech Software Engineer information

See California salary details

$62.7K

$145.6K

$202.8K

How much do biotech software engineer jobs pay per year?

As of Jun 12, 2026, the average yearly pay for biotech software engineer in California is $145,592.00, according to ZipRecruiter salary data. Most workers in this role earn between $118,400.00 and $170,700.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive in the Biotech Software Engineer position, and why are they important?

To thrive as a Biotech Software Engineer, you need a solid background in computer science or software engineering, coupled with an understanding of biology, genetics, or related life sciences. Familiarity with programming languages such as Python or Java, experience using bioinformatics tools (like BLAST or Bioconductor), and, in some settings, knowledge of regulatory standards are highly valuable. Strong problem-solving abilities, effective communication, and the ability to work well in interdisciplinary teams distinguish top performers in this field. These skills are crucial for building reliable software solutions that support scientific discovery and innovation in biotechnology organizations.

What are some typical projects or daily tasks for a Biotech Software Engineer?

As a Biotech Software Engineer, you'll often develop and maintain software tools for analyzing biological data, automate laboratory workflows, or create user-friendly interfaces for scientific researchers. Your daily tasks might include writing code, troubleshooting algorithms, reviewing scientific data, and collaborating closely with biologists, data scientists, and laboratory technicians. Depending on the company, you may be involved in developing cloud-based platforms, integrating new laboratory hardware, or ensuring software compliance with industry regulations. This dynamic and collaborative environment means your work directly impacts ongoing research and helps accelerate scientific discoveries in the biotech sector.

What is a Biotech Software Engineer job?

A Biotech Software Engineer develops software solutions for the biotechnology industry, enabling research, data analysis, and automation in fields like genomics, bioinformatics, and drug discovery. They work with scientists to design algorithms, manage biological data, and create applications that support experiments and workflows. This role requires expertise in programming, cloud computing, and biological sciences to bridge the gap between technology and life sciences.

What are the most commonly searched types of Biotech Software Engineer jobs in California? The most popular types of Biotech Software Engineer jobs in California are:
What are popular job titles related to Biotech Software Engineer jobs in California? For Biotech Software Engineer jobs in California, the most frequently searched job titles are:
What job categories do people searching Biotech Software Engineer jobs in California look for? The top searched job categories for Biotech Software Engineer jobs in California are:
What cities in California are hiring for Biotech Software Engineer jobs? Cities in California with the most Biotech Software Engineer job openings:
Biotech Software Engineer jobs near you
Senior .NET Software Engineer - Biotech Instrumentation (JP11059rTO)

Senior .NET Software Engineer - Biotech Instrumentation (JP11059rTO)

3 Key Consulting

Thousand Oaks, CA

$129K - $171K/yr

Other

Posted 4 days ago

Job description

Job Title:Senior .NET Software Engineer BiotechInstrumentation(JP11059rTO)
Location:Thousand Oaks, CA., OR South San Francisco
Business Unit:Research & Automation Technologies (R&AT) - Center for Research Acceleration through Digital Innovation
Employment Type: Contract to Hire
Duration:3 years with likely conversion to FTE
Posting Date: 12/26/2022
3 Key Consulting is hiring Senior Software Engineerfor a consulting engagement with our direct client, a leading global biopharmaceutical company.
Job Description:
Manager is looking for onsite support, either to the Thousand Oaks or South San Francisco locations. This is a developer role and not a typical software engineer. they will be writing software for automation used in robotics for lab equipment.
Qualifications:
  • Manager needs individual with min Bachelors and 4 YOE or Masters with 2 YOE.
  • Looking for expertise with Microsoft development technologies (Visual Studio, .NET framework, C#, WPF), and Python.
  • Experience with cloud-based technologies, in particular AWS.
  • Experience with database technologies (SQL Server, Oracle, NoSQL).
  • Experience with DevOps (GitLab, TeamCity).
  • The Research & Automation Technologies (R&AT) group within client's Center for Research Acceleration through Digital Innovation (CRADI) is seeking a highly creative candidate for a Senior Software Engineer position.
  • This person will be responsible for the development and delivery of full-stack solutions that accelerate the discovery and development of Client's life-saving therapeutics. These solutions will require integration with multiple systems across our informatic ecosystem, using a variety of existing and emerging technologies, including source code repository and automated build system managements, AWS infrastructure management, device driver development, and data integration.
  • This Senior Software Engineer will play a key role in developing solutions that enable the evolution of our Research labs into highly automated, highly integrated next-generation facilities.
  • Our goal is to develop transformative, automated systems that fundamentally change the way science is executed in our Research labs. To effectively communicate and collaborate with a diverse group of stakeholders, an understanding of biology, chemistry and drug discovery is essential.

Why is the Position Open?
Staff Augmentation
Top Must-Have Skill Sets:
  • Expertise with Microsoft development technologies (Visual Studio, .NET framework, C#, WPF), and Python.
  • Experience with cloud-based technologies, in particular AWS.
  • Experience with database technologies (SQL Server, Oracle, NoSQL).
  • Experience with DevOps (GitLab, TeamCity).

Day to Day Responsibilities:
  • Development of device drivers to facilitate lab instrument integration with controlling software
  • Development of software to control small-scale lab instrument integrations
  • Development of lab-specific informatic systems to manage individual labs' data and integrate it with Research Informatic Systems
  • Development of lab automation control software scripts that control the execution of scientific protocols by lab automation

Employee Value Proposition:
This is not a maintenance role. There is no one project. Every project is new and creative because the tools do not exist commercially. Excellent opportunity to see product in use in real time.
Interview process:
Phone interview with 3-4 team members
We invite qualified candidates to sendyour resume torecruiting@3keyconsulting.com. Ifyou decide that you're not interested in pursuing this position, please feel free to take a look at the other positions on our websitewww.3keyconsulting.com/careers. You are welcome to also sharethis opportunity withanyone you think might be interested in applying for this role.

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