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Biotech Software Engineer Jobs (NOW HIRING)

Benchling

Software Engineer, Agents

San Francisco, CA · On-site

Benchling is the AI platform for biotech R&D, helping scientists automate and accelerate breakthroughs in scientific work. The role of Software Engineer, Agents involves building AI agents that ...

Benchling

Software Engineer, Agents

San Francisco, CA · On-site

Benchling is an AI platform for biotech R&D, focused on transforming scientific workflows through AI. The Software Engineer, Agents will build end-to-end AI systems that automate scientific tasks ...

The Ceres Group

Software Engineer

Burlington, MA

Software Engineer Developer Burlington, MA Biotechnology JO-2101-1308 As a software engineer, you will be part of a dynamic team that provides support directly to customers using our security-focused ...

GenScript/ProBio

Sr. Software Engineer

Redmond, WA · On-site

$150K - $170K/yr

HK) is a global biotechnology group. Founded in 2002, GenScript has an established global presence ... Act as SME for software architecture: document APIs, mentor junior engineers, and align technical ...

GenScript/ProBio

Sr. Software Engineer

Redmond, WA · On-site

$150K - $170K/yr

HK) is a global biotechnology group. Founded in 2002, GenScript has an established global presence ... Act as SME for software architecture: document APIs, mentor junior engineers, and align technical ...

Mango

Software Engineer

Los Angeles, CA

$120K - $130K/yr

We are seeking a Software Engineer to work on unique and challenging problems across a broad ... Description Overview Join our growing startup in a role that blends cutting edge biotech with the ...

Medpace

Software Engineer

Cincinnati, OH · On-site

The Software Engineer will contribute to the development and support of internal systems, working ... biotechnology Founded in 1992, the company is headquartered in Cincinnati, USA, with a team of 5001 ...

Medpace

Software Engineer

Denver, CO · On-site

The Software Engineer will contribute to software development teams, build applications in an Agile ... biotechnology Founded in 1992, the company is headquartered in Cincinnati, USA, with a team of 5001 ...

Lilly

Senior Software Engineer, TuneLab

San Francisco, CA · On-site

$144K - $190K/yr

The job now is to turn them into something a biotech startup can actually use: a coherent workflow ... We're looking for a Senior Software Engineer to be one of the early engineers on this team. You'll ...

Chestnut (YC X25)

Software Engineer

San Francisco, CA · On-site

$300K/yr

Experience working with sensitive data (finance, biotech, etc.). * ? Desire to found your own ... Software Engineer jobs in San Francisco, CA . We're unlocking community knowledge in a new way.

Benchling

Software Engineer, Agents

San Francisco, CA · On-site

$165K - $223K/yr

Software Engineer, Agents Biotechnology is rewriting life as we know it, from the medicines we take to the crops we grow and the materials we wear. Moving at the new speed of science requires better ...

Spire

Senior Backend Software Engineer

Boulder, CO · Hybrid

$127K - $167K/yr

About the Role Spire is looking for a Senior Software Engineer to help design, build, and improve ... Experience working in aerospace, scientific computing, biotech, telecommunications, robotics, or ...

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Biotech Software Engineer information

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$63.5K

$147.5K

$205.5K

How much do biotech software engineer jobs pay per year?

As of Jun 18, 2026, the average yearly pay for biotech software engineer in the United States is $147,524.00, according to ZipRecruiter salary data. Most workers in this role earn between $120,000.00 and $173,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive in the Biotech Software Engineer position, and why are they important?

To thrive as a Biotech Software Engineer, you need a solid background in computer science or software engineering, coupled with an understanding of biology, genetics, or related life sciences. Familiarity with programming languages such as Python or Java, experience using bioinformatics tools (like BLAST or Bioconductor), and, in some settings, knowledge of regulatory standards are highly valuable. Strong problem-solving abilities, effective communication, and the ability to work well in interdisciplinary teams distinguish top performers in this field. These skills are crucial for building reliable software solutions that support scientific discovery and innovation in biotechnology organizations.

What are some typical projects or daily tasks for a Biotech Software Engineer?

As a Biotech Software Engineer, you'll often develop and maintain software tools for analyzing biological data, automate laboratory workflows, or create user-friendly interfaces for scientific researchers. Your daily tasks might include writing code, troubleshooting algorithms, reviewing scientific data, and collaborating closely with biologists, data scientists, and laboratory technicians. Depending on the company, you may be involved in developing cloud-based platforms, integrating new laboratory hardware, or ensuring software compliance with industry regulations. This dynamic and collaborative environment means your work directly impacts ongoing research and helps accelerate scientific discoveries in the biotech sector.

What is a Biotech Software Engineer job?

A Biotech Software Engineer develops software solutions for the biotechnology industry, enabling research, data analysis, and automation in fields like genomics, bioinformatics, and drug discovery. They work with scientists to design algorithms, manage biological data, and create applications that support experiments and workflows. This role requires expertise in programming, cloud computing, and biological sciences to bridge the gap between technology and life sciences.

More about Biotech Software Engineer jobs
What cities are hiring for Biotech Software Engineer jobs? Cities with the most Biotech Software Engineer job openings:
What are the most commonly searched types of Biotech Software Engineer jobs? The most popular types of Biotech Software Engineer jobs are:
What states have the most Biotech Software Engineer jobs? States with the most job openings for Biotech Software Engineer jobs include:
What job categories do people searching Biotech Software Engineer jobs look for? The top searched job categories for Biotech Software Engineer jobs are:
Biotech Software Engineer jobs near you
Infographic showing various Biotech Software Engineer job openings in the United States as of June 2026, with employment types broken down into 33% Full Time, 17% Part Time, and 50% Contract. Highlights an 87% Physical, 5% Hybrid, and 8% Remote job distribution, with an average salary of $147,524 per year, or $70.9 per hour.
Senior Software Engineer - Biotech Instrumentation

Senior Software Engineer - Biotech Instrumentation

3 Key Consulting

Newbury Park, CA

$129K - $171K/yr

Other

Posted 12 days ago

Job description

Senior Software Engineer - Biotech Instrumentation

Location: Thousand Oaks, CA, OR South San Francisco

Business Unit: Research & Automation Technologies - Center for Research Acceleration through Digital Innovation

Employment Type: Contract to Hire

Duration: 3 years with likely conversion to FTE

Job Description

Manager is looking for onsite support, either to the Thousand Oaks or South San Francisco locations. This is a developer role and not a typical software engineer. They will be writing software for automation used in robotics for lab equipment.

Qualifications
  • Manager needs individual with min Bachelors and 4 YOE or Masters with 2 YOE.
  • Looking for expertise with Microsoft development technologies (Visual Studio,.NET framework, C#, WPF), and Python.
  • Experience with cloud-based technologies, in particular AWS.
  • Experience with database technologies (SQL Server, Oracle, NoSQL).
  • Experience with DevOps (GitLab, TeamCity).
Why is the Position Open?

Staff Augmentation

Top Must-Have Skill Sets
  • Expertise with Microsoft development technologies (Visual Studio,.NET framework, C#, WPF), and Python.
  • Experience with cloud-based technologies, in particular AWS.
  • Experience with database technologies (SQL Server, Oracle, NoSQL).
  • Experience with DevOps (GitLab, TeamCity).
Day to Day Responsibilities
  • Development of device drivers to facilitate lab instrument integration with controlling software
  • Development of software to control small-scale lab instrument integrations
  • Development of lab-specific informatic systems to manage individual labs' data and integrate it with Research Informatic Systems
  • Development of lab automation control software scripts that control the execution of scientific protocols by lab automation
Employee Value Proposition

This is not a maintenance role. There is no one project. Every project is new and creative because the tools do not exist commercially. Excellent opportunity to see product in use in real time.

Interview Process

Phone interview with 3-4 team members

We invite qualified candidates to send your resume to recruiting@3keyconsulting.com. If you decide that you're not interested in pursuing this position, please feel free to take a look at the other positions on our website www.3keyconsulting.com/careers. You are welcome to also share this opportunity with anyone you think might be interested in applying for this role.

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