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Clinical Application Manager Jobs (NOW HIRING)

The CAS also plays a key role in clinical application management, supporting issue resolution, and system optimization to ensure stable, efficient, and standardized use of clinical systems. Clinical ...

Clinical Application Specialist Job Type: Full-time (Monday-Friday, 8:00 AM - 5:00 PM) Position ... Manages user access, security roles, and audit-related requests. * Participates in education and ...

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Clinical Application Manager information

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$39.5K

$121.5K

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How much do clinical application manager jobs pay per year?

As of May 31, 2026, the average yearly pay for clinical application manager in the United States is $121,466.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,500.00 and $142,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Clinical Application Manager, and why are they important?

To thrive as a Clinical Application Manager, you need a solid background in healthcare IT, clinical workflows, and project management, often supported by a degree in health informatics or related fields. Familiarity with electronic health record (EHR) systems, clinical software, and certifications like PMP or Epic certification are typically required. Strong leadership, communication, and problem-solving skills help manage teams and facilitate collaboration between clinical staff and IT professionals. These skills and qualifications are essential to ensure smooth implementation, optimization, and support of clinical applications that enhance patient care and operational efficiency.

How does a Clinical Application Manager typically collaborate with clinical staff and IT teams to ensure successful implementation of new healthcare software?

A Clinical Application Manager plays a central role in bridging the gap between clinical staff and IT teams during the rollout of new healthcare applications. They gather feedback from clinicians to ensure the software meets practical workflow needs, while also working closely with IT to address technical requirements and troubleshoot issues. Regular meetings, training sessions, and hands-on support are common methods used to facilitate smooth adoption and ongoing optimization. This collaboration is crucial for minimizing disruptions to patient care and maximizing the value of the technology investment.

What does a Clinical Application Manager do?

A Clinical Application Manager oversees the implementation, maintenance, and optimization of clinical software systems within healthcare organizations. They work closely with clinical staff, IT teams, and vendors to ensure that applications such as electronic health records (EHRs) and other clinical tools support patient care effectively and comply with regulations. Their responsibilities also include training staff, troubleshooting issues, and managing upgrades or new deployments to ensure seamless clinical operations.

What is the difference between Clinical Application Manager vs Clinical Systems Specialist?

AspectClinical Application ManagerClinical Systems Specialist
CredentialsHealthcare IT certifications, clinical backgroundIT certifications, clinical knowledge
Work EnvironmentHealthcare facilities, hospitals, clinicsHealthcare IT departments, vendor sites
Employer & IndustryHospitals, healthcare providersHealthcare IT vendors, hospitals
Primary FocusOverseeing clinical application implementation and supportSupporting and troubleshooting clinical systems

The Clinical Application Manager primarily manages the implementation, support, and optimization of clinical software in healthcare settings, ensuring clinical workflows are supported effectively. In contrast, the Clinical Systems Specialist focuses on technical support, troubleshooting, and system maintenance. Both roles require clinical and technical knowledge but differ in their scope of responsibilities and focus areas.

More about Clinical Application Manager jobs
What cities are hiring for Clinical Application Manager jobs? Cities with the most Clinical Application Manager job openings:
What are the most commonly searched types of Clinical Application jobs? The most popular types of Clinical Application jobs are:
What states have the most Clinical Application Manager jobs? States with the most job openings for Clinical Application Manager jobs include:
Infographic showing various Clinical Application Manager job openings in the United States as of May 2026, with employment types broken down into 2% As Needed, 84% Full Time, 10% Part Time, 1% Temporary, and 3% Contract. Highlights an 96% Physical, and 4% Remote job distribution, with an average salary of $121,466 per year, or $58.4 per hour.
Clinical Application Specialist

Clinical Application Specialist

Acacia Network

Bronx, NY • On-site

$79K - $81K/yr

Full-time

Medical, Dental, Vision, PTO

Posted 20 days ago


Acacia Network rating

4.7

Company rating: 4.7 out of 10

Based on 12 frontline employees who took The Breakroom Quiz


Job description

MISSION STATEMENT

Are you ready to give back to the community while pursuing your passion? For over 50 years, Acacia Network and its affiliates have been committed to improving the quality-of-life and wellbeing of underserved communities in New York City and beyond. We are one of the leading human services organizations in New York City and the largest Hispanic-led nonprofit in the State, serving over 150,000 individuals every year. Our programs serve individuals at every age and developmental level, from the very young through our daycare programs to mature adults through our older adults centers. Our extensive array of community-based services are fully integrated, bilingual and culturally competent.

POSITION OVERVIEW

Under the direction of the Director of Clinical Applications (DCA), the Clinical Application Specialist (CAS) supports Primary Care (La Casa de Salud, a Federally Qualified Health Center) and Acacia Network Behavioral Health programs by delivering and maintaining effective end-user training for clinical information systems.

The CAS also plays a key role in clinical application management, supporting issue resolution, and system optimization to ensure stable, efficient, and standardized use of clinical systems. Clinical applications include the EMR/EHR platforms (NextGen and AWARDS), as well as other EHR-integrated and standalone clinical applications for day-to-day use. The CAS partners with clinical, operational, quality improvement, and IT teams to enhance adoption, incorporate user feedback, provide user training and drive continuous improvement.

KEY ESSENTIAL FUNCTIONS

Training and adoption

  • Design and deliver role-based training for clinical, administrative, and technical staff on clinical applications and workflows (e.g., EMR/EHR, patient engagement tools, referrals, practice management systems).
  • Assess end-user learning needs and tailor training approaches to support effective adoption and reinforce standardized workflows and best practices.
  • Develop, maintain, and update training materials to reflect system changes, upgrades, and optimization initiatives.
  • Evaluate training effectiveness and recommend enhancements to improve user competency and system utilization.
  • Create clear training resources, job aids, and workflow documentation to support ongoing learning.

Application Management and Support

  • Provide frontline support by troubleshooting clinical application issues, coordinating resolution, and escalating to IT or vendors as needed.
  • Assist with application configuration, maintenance, and testing of system updates or enhancements prior to release.
  • Document recurring issues, training gaps, and enhancement opportunities; share insights with the DCA and relevant stakeholders.
  • Support change management processes, including adherence to documentation, governance, and release protocols.

Collaboration & Continuous Improvement

  • Collaborate across departments to align workflows, training, and system functionality with operational needs.
  • Participate in improvement initiatives, workgroups, and meetings to support system optimization and user experience.
  • Incorporate end-user feedback into training strategies and application improvements.
  • Prepare and present information to diverse audiences, including clinical and non-clinical staff.

Additional Responsibilities

  • Maintain current knowledge of clinical applications and healthcare workflows.
  • Perform other duties as assigned by the DCA.

REQUIREMENTS

  • Bachelor's degree in health information management, health informatics, data science, health administration, healthcare management, engineering or related field, preferred.
  • Two (2) year's experience working with EMR/EHR applications (NextGen preferred)
  • One (1) year experience in Community Health Centers (preferred)
  • Knowledge of Ambulatory and Outpatient operational workflows
  • Communicate clearly and effectively with end users of varying technical skill levels
  • Intermediate understanding of the information technology landscape
  • Strong interpersonal communication skills - able to maintain effective relationships across a variety of organizational levels
  • Follow established change control, documentation, and governance processes
  • A compassionate and trauma-informed care approach to patients is essential
  • Ability to travel between clinic and outreach locations across New York State as needed

WHY JOIN US?

Acacia Network provides a comprehensive and competitive benefits package to our employees. In addition to a competitive salary, our benefits include medical, dental, and vision coverage. We also offer generous paid time off, including vacation days and paid holidays, to support a healthy work-life balance. We prioritize the well-being of our employees both professionally and personally.

As an Equal Opportunity Employer, we encourage individuals from all backgrounds to apply.


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