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Clinical Application Manager Jobs (NOW HIRING)

Provides leadership, Epic knowledge, and day-to-day guidance to all Application Analysts. Works ... clinical experience in a health system. * 2 years Management or supervisor experience. * An ...

Director of Clinical Application

Bronx, NY · On-site

$114K - $116K/yr

Lead and execute clinical application optimization strategies for Primary Care (La Casa de Salud ... Optimization & System Management * Serve as the subject matter expert for the EHR (NextGen and ...

As a Clinical Applications Specialist (CAS) supporting the GE Healthcare imaging applications team ... Established project management skills. #LI-AD2 We will not sponsor individuals for employment visas ...

Clinical Specialist Manager

Saint Paul, MN · On-site

$95K - $120K/yr

Rhythm Express is seeking a mission‑driven Clinical Specialist Manager to lead a national team ... This position is ideal for experienced cardiac monitoring or clinical application leaders who love ...

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Clinical Application Manager information

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$39.5K

$121.5K

$202K

How much do clinical application manager jobs pay per year?

As of Jun 25, 2026, the average yearly pay for clinical application manager in the United States is $121,466.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,500.00 and $142,000.00 per year, depending on experience, location, and employer.

What is the difference between Clinical Application Manager vs Clinical Systems Specialist?

AspectClinical Application ManagerClinical Systems Specialist
CredentialsHealthcare IT certifications, clinical backgroundIT certifications, clinical knowledge
Work EnvironmentHealthcare facilities, hospitals, clinicsHealthcare IT departments, vendor sites
Employer & IndustryHospitals, healthcare providersHealthcare IT vendors, hospitals
Primary FocusOverseeing clinical application implementation and supportSupporting and troubleshooting clinical systems

The Clinical Application Manager primarily manages the implementation, support, and optimization of clinical software in healthcare settings, ensuring clinical workflows are supported effectively. In contrast, the Clinical Systems Specialist focuses on technical support, troubleshooting, and system maintenance. Both roles require clinical and technical knowledge but differ in their scope of responsibilities and focus areas.

What does a Clinical Application Manager do?

A Clinical Application Manager oversees the implementation, maintenance, and optimization of clinical software systems within healthcare organizations. They work closely with clinical staff, IT teams, and vendors to ensure that applications such as electronic health records (EHRs) and other clinical tools support patient care effectively and comply with regulations. Their responsibilities also include training staff, troubleshooting issues, and managing upgrades or new deployments to ensure seamless clinical operations.

What are the key skills and qualifications needed to thrive as a Clinical Application Manager, and why are they important?

To thrive as a Clinical Application Manager, you need a solid background in healthcare IT, clinical workflows, and project management, often supported by a degree in health informatics or related fields. Familiarity with electronic health record (EHR) systems, clinical software, and certifications like PMP or Epic certification are typically required. Strong leadership, communication, and problem-solving skills help manage teams and facilitate collaboration between clinical staff and IT professionals. These skills and qualifications are essential to ensure smooth implementation, optimization, and support of clinical applications that enhance patient care and operational efficiency.

How does a Clinical Application Manager typically collaborate with clinical staff and IT teams to ensure successful implementation of new healthcare software?

A Clinical Application Manager plays a central role in bridging the gap between clinical staff and IT teams during the rollout of new healthcare applications. They gather feedback from clinicians to ensure the software meets practical workflow needs, while also working closely with IT to address technical requirements and troubleshoot issues. Regular meetings, training sessions, and hands-on support are common methods used to facilitate smooth adoption and ongoing optimization. This collaboration is crucial for minimizing disruptions to patient care and maximizing the value of the technology investment.
More about Clinical Application Manager jobs
What cities are hiring for Clinical Application Manager jobs? Cities with the most Clinical Application Manager job openings:
What are the most commonly searched types of Clinical Application jobs? The most popular types of Clinical Application jobs are:
What states have the most Clinical Application Manager jobs? States with the most job openings for Clinical Application Manager jobs include:
Infographic showing various Clinical Application Manager job openings in the United States as of June 2026, with employment types broken down into 1% As Needed, 83% Full Time, 15% Part Time, and 1% Contract. Highlights an 95% Physical, 1% Hybrid, and 4% Remote job distribution, with an average salary of $121,466 per year, or $58.4 per hour.

Clinical Application Coordinator

Sycuan

El Cajon, CA • On-site

Full-time

Posted 2 days ago


Job description

The ancestors of the Sycuan Band of the Kumeyaay Nation existed many centuries ago as a community of people...a Tribe living together, farming, hunting and fishing to survive.
Much has changed since that time. Today the Sycuan Tribe governs its Reservation, owns and operates a Casino and a Golf Resort, and owns a number of other business ventures in the San Diego Region.
One attribute that remains unchanged, however, is Sycuan's sense of community. Sycuan is more than just a business. Sycuan is a community of people working together toward a common goal. Whether you work in our state-of-the-art Casino, our beautiful Resort, or become a staff member in our Tribal Government division, you will be part of the Sycuan family.
Clinical Applications Coordinator
Job Purpose
Supports the implementation, configuration, and daily use of clinical application systems, including EHR and EDR platforms, under the guidance of the HIT Manager. Works closely with clinical and administrative teams to ensure effective system functionality, accurate clinical documentation, and efficient workflows. Provides user onboarding, training, and ongoing support for application features, templates, and reporting tools. Develops and maintains custom templates and reports to meet clinical and operational needs. Assists in evaluating and improving clinical workflows and information flow processes to enhance system utilization and user adoption. Collaborates with cross-functional departments-including Administration, Business Office, Behavioral Health, Dental, Medical, HIM, and Pharmacy-to support consistent, effective use of clinical applications across the organization.
Job Duties and Responsibilities
(Note: Duties and responsibilities may be added, deleted, or changed at the sole discretion of Sycuan Management at any time)
Training & Onboarding
  • Design and deliver role-specific EHR training for clinical and clinical support staff, including onboarding for new EHR/EDR/PM users.
  • Develop and maintain training materials, including manuals, videos, tip sheets, and standardized reporting guides.
  • Adapt training approaches to varying levels of computer literacy and EHR experience.

EHR Support, Optimization & Gap Analysis
  • Evaluate EHR functionality and system performance to identify deficiencies, gaps, and opportunities for improvement.
  • Conduct gap analysis for new software implementations and system upgrades to assess workflow impact and user needs.
  • Monitor clinical efficiency and system utilization to recommend enhancements.
  • Incorporate user feedback and data to support ongoing system optimization.

Workflow & Quality Improvement
  • Analyze clinical workflows to identify inefficiencies and improvement opportunities.
  • Participate in quality assurance and improvement initiatives related to clinical documentation and EHR use.

Project Support & Collaboration
  • Provide application support for projects and system initiatives under the direction of the HIT Manager and IT teams.
  • Collaborate with clinical, administrative, and technical stakeholders to support implementation and optimization efforts.
  • Foster an environment that encourages reporting of system issues and improvement suggestions.

Reporting & Super User Responsibilities
  • Prepare and submit monthly reports to the HIT Manager and Executive Director.
  • Perform Super User responsibilities and other assigned application support duties.

Job Specifications
Education and Experience
Essential:
  • High school diploma or GED
  • Minimum 3 years of professional CAC experience
  • Associates in Information Technology or Health Information Technology
  • Experience with NextGen E.H.R, EDR, and PM software
  • Working knowledge of HIPAA compliance within a clinical environment

Desirable:
  • LVN or higher nursing / clinical background
  • NextGen Certified Professional a plus
  • Experience in a Tribal or Community Health Clinic

Skills and Knowledge
  • Operates with high autonomy and discretion
  • Telephone and remote troubleshooting
  • Quality focus
  • Flexible and able to work in a unique environment
  • Able to work with varying levels of staff
  • Able to follow written and verbal instructions to complete tasks
  • Have a positive attitude and a desire to help people

Supervisory/Managerial Accountability
Direct: None
Indirect: None
If you enjoy being part of a community dedicated to creating a memorable guest experience, we invite you to explore career opportunities with Sycuan and join our winning team!