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Clinical Applications Manager Jobs (NOW HIRING)

Concentra

Manager, Clinical Applications

Addison, TX · On-site

The Manager, Clinical Applications - Development and Engineering, plays a vital role in Concentra's IT organization by ensuring that all software systems are reliable and efficient. This position is ...

Concentra

Manager, Clinical Applications

Addison, TX · On-site

The Manager, Clinical Applications - Development and Engineering, plays a vital role in Concentra's IT organization by ensuring that all software systems are reliable and efficient. This position is ...

NorthShore

Manager, Clinical Applications

Warrenville, IL · On-site

$58.50 - $90.68/hr

Manager, Clinical Applications * Location: Skokie, IL or Warrenville, IL or Arlington Heights, IL * Full Time * Hours: Monday-Friday, 8:00am - 5:00pm * Hybrid Position * Local travel to other ...

Endeavor Health

Manager, Clinical Applications

Skokie, IL · On-site

$58.50 - $90.68/hr

Manager, Clinical Applications * Location: Skokie, IL or Warrenville, IL or Arlington Heights, IL * Full Time * Hours: Monday-Friday, 8:00am - 5:00pm * Hybrid Position * Local travel to other ...

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$113.6K

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How much do clinical applications manager jobs pay per year?

As of Jul 20, 2026, the average yearly pay for clinical applications manager in the United States is $113,560.00, according to ZipRecruiter salary data. Most workers in this role earn between $101,000.00 and $126,500.00 per year, depending on experience, location, and employer.

What does a clinical application manager do?

A clinical application manager oversees the implementation, maintenance, and optimization of clinical software systems used in healthcare settings. They collaborate with medical staff to ensure systems meet clinical needs, troubleshoot technical issues, and may coordinate training and updates, often requiring knowledge of healthcare workflows and IT tools.

What is a Clinical Applications Manager?

A Clinical Applications Manager oversees the implementation, management, and optimization of clinical software applications within healthcare organizations. They work closely with clinical staff, IT teams, and vendors to ensure that clinical information systems such as electronic health records (EHR) operate efficiently and meet the needs of healthcare providers. Their responsibilities often include training staff, troubleshooting issues, and ensuring compliance with healthcare regulations. This role requires a combination of technical knowledge, leadership skills, and an understanding of clinical workflows.

What are the key skills and qualifications needed to thrive as a Clinical Applications Manager, and why are they important?

To thrive as a Clinical Applications Manager, you need in-depth knowledge of clinical workflows, healthcare IT systems, and a relevant degree such as in health informatics or information technology. Familiarity with electronic health records (EHR), clinical decision support systems, and certifications like Epic or Cerner are typically required. Strong leadership, problem-solving abilities, and effective communication are vital soft skills for managing teams and interfacing with both technical and clinical stakeholders. These skills ensure the effective implementation, optimization, and support of clinical applications, directly impacting patient care and operational efficiency.

What is the difference between Clinical Applications Manager vs Clinical Systems Specialist?

AspectClinical Applications ManagerClinical Systems Specialist
CredentialsTypically requires a bachelor's degree in healthcare, IT, or related field; certifications like Epic or Cerner are commonOften holds similar degrees and certifications, focusing on specific clinical systems expertise
Work EnvironmentManages clinical software implementation, training, and support within healthcare facilitiesProvides technical support, troubleshooting, and system optimization for clinical software
Employer & Industry UsageUsed by hospitals, clinics, and healthcare organizations for system managementEmployed in similar settings, often working alongside Clinical Applications Managers

The Clinical Applications Manager and Clinical Systems Specialist roles overlap in healthcare IT, with the manager focusing on overseeing system deployment and staff training, while the specialist provides technical support and system troubleshooting. Both roles require clinical IT knowledge and certifications, but the manager has broader responsibilities in project management and team coordination.

Is being a MOA a good entry level job?

A Medical Office Assistant (MOA) role is often considered an entry-level position in healthcare, requiring basic administrative and clinical skills. It provides experience in patient interaction, medical records, and office management, which can serve as a foundation for advanced healthcare careers. However, it may require certification or training and typically offers limited responsibilities compared to more specialized roles.

What are some common challenges faced by Clinical Applications Managers when implementing new healthcare software systems?

Clinical Applications Managers often encounter challenges such as ensuring seamless integration with existing hospital systems, managing user adoption among clinical staff, and meeting regulatory compliance requirements. They must coordinate closely with IT, clinical teams, and vendors to address technical issues and workflow disruptions. Successful managers proactively communicate changes, provide thorough training, and gather feedback to optimize system performance and user satisfaction.

How much do clinical application specialists make in the US?

Clinical application specialists in the US typically earn between $70,000 and $110,000 annually, depending on experience, location, and certifications. They often work in healthcare or medical device companies, providing technical support and training for clinical software and equipment.

How much does an app manager make?

A Clinical Applications Manager typically earns between $80,000 and $130,000 annually, depending on experience, location, and the complexity of the clinical systems managed. Salaries may also include benefits such as bonuses, healthcare, and professional development opportunities, especially in healthcare or hospital settings where technical expertise and certifications are valued.
More about Clinical Applications Manager jobs
What cities are hiring for Clinical Applications Manager jobs? Cities with the most Clinical Applications Manager job openings:
What are the most commonly searched types of Clinical Applications jobs? The most popular types of Clinical Applications jobs are:
What states have the most Clinical Applications Manager jobs? States with the most job openings for Clinical Applications Manager jobs include:
What job categories do people searching Clinical Applications Manager jobs look for? The top searched job categories for Clinical Applications Manager jobs are:
Clinical Applications Manager jobs near you
Infographic showing various Clinical Applications Manager job openings in the United States as of July 2026, with employment types broken down into 1% As Needed, 77% Full Time, 18% Part Time, 1% Temporary, and 3% Contract. Highlights an 89% Physical, 2% Hybrid, and 9% Remote job distribution, with an average salary of $113,560 per year, or $54.6 per hour.
Epic Clinical Applications Manager

Epic Clinical Applications Manager

Shepherd Center

Atlanta, GA • On-site

Full-time

Re-posted 21 days ago

Shepherd Center rating

8.9

Company rating: 8.9 out of 10

Based on 8 frontline employees who took The Breakroom Quiz

16th of 1,020 rated hospitals

Job description

About Shepherd Center
With five decades of experience, Shepherd Center provides world-class clinical care, research, and family support for people experiencing the most complex conditions, including spinal cord and brain injuries, multi-trauma, traumatic amputations, stroke, multiple sclerosis, and pain. An elite center ranked by U.S. News as one of the nation's top hospitals for rehabilitation, Shepherd Center is also recognized as both Spinal Cord Injury and Traumatic Brain Injury Model Systems. Shepherd is the only rehabilitation facility in the nation with an intensive care unit on-site, allowing us to care for the most complex patients and begin the rehabilitation process sooner. Shepherd Center treats thousands of patients annually with unmatched expertise and unwavering compassion to help them begin again.
Shepherd Center's culture is one of hope, humor, and hard work. You will enjoy career growth, strong relationships with co-workers, strong support from leadership, and fun activities that have kept over 12% of staff members working at Shepherd for more than 20 years.
The Information Systems Epic Application Manager manages and coordinates the daily activities of an IS Clinical/Ancillary Analyst team responsible for the design, build, testing, validation, maintenance, and ongoing support of Epic applications.
This role requires both strong people leadership and hands-on Epic build expertise. The IS Epic Application Manager develops and maintains deep knowledge of clinical and ancillary workflows, as well as system functionality, to effectively support operational needs.
The manager serves as a translator between technical and operational teams - communicating complex concepts in a way that is meaningful to analysts, department leaders, and end users. This role leads workflow design and system build in alignment with both clinical and ancillary requirements.
The IS Epic Application Manager represents the Information Systems team and is responsible for establishing and maintaining strong working relationships with Shepherd Center staff, our Community Connect partner (Piedmont Healthcare), Epic representatives, and all users who interact with Epic applications.
  • Effectively lead and manage an Epic Clinical/Ancillary Applications team, fostering a positive and respectful work environment with clear expectations and accountability.
  • Establish regular goals and touchpoints; provide ongoing coaching, feedback, recognition, and performance management to support staff development and optimize performance.
  • Perform management and administrative responsibilities including timekeeping, staffing plans, and on-call scheduling.
  • Lead cross-functional projects in alignment with hospital policies, regulatory requirements, and standards of practice.
  • Prioritize work and manage team resources effectively; maintain accurate project tracking and provide timely status updates.
  • Facilitate regular meetings with team members and stakeholders to review deliverables, risks, issues, and upcoming milestones.
  • Partner with stakeholders to identify, develop, and evaluate training and education needs across roles (staff, providers, super users, and students).
  • Monitor system performance and proactively escalate risks or issues as appropriate.
  • Gather and analyze workflows, technical requirements, and functional specifications for Epic applications and modules.
  • Lead the design, build, validation, and maintenance of Epic configurations.
  • Troubleshoot and resolve complex technical issues across integrated systems.
  • Test, monitor, and support interfaces in collaboration with IT teams and third-party vendors.
  • Apply knowledge of HL7, Epic Bridges, and Cloverleaf to assess integration issues and impacts.
  • Maintain system tables, files, and configurations in accordance with established standards.
  • Implement approved system changes following change control processes.
  • Provide expertise during workflow design sessions, validation, integrated testing, and ongoing optimization efforts.
  • Perform application and integrated testing; document results and ensure timely resolution of issues.
  • Maintain current knowledge of clinical/ancillary operations, regulatory requirements, and industry best practices.
  • Partner with interdisciplinary teams to ensure systems support compliance and operational effectiveness.
  • Oversee Nova Notes and support Epic upgrade activities (IRDs, SUs, RAs), including build, testing, and deployment.
  • Review and prioritize system requests; assign work based on team capacity and organizational priorities.
  • Support Epic security design and maintenance as appropriate.
  • Proactively manage issue escalation, communication, and resolution.
  • Develop and maintain system documentation and knowledge base materials.
  • Collaborate with Principal Trainers to support role-based training and education programs.
  • Provide support to training efforts during peak demand periods.
  • Ensure clear and timely communication with peers and IT leadership regarding project status, risks, and resource needs.
  • Stay current with healthcare technology trends and Epic advancements.
  • Collaborate across clinical, financial, and ancillary departments to maximize the value of information systems.
  • Serve as a mentor and point of contact for super users across the organization.
  • Participate in Tier 2 on-call support rotation as needed.
  • Maintain required licensure and certifications.
  • Demonstrate strong written and verbal communication skills, with the ability to translate technical concepts for diverse audiences.
  • Exhibit strong ownership, critical thinking, and problem-solving skills.
  • Thrive in a fast-paced, deadline-driven environment with competing priorities.
  • Demonstrate attention to detail, organization, and accountability in all aspects of work.
  • Deliver exceptional customer service aligned with Shepherd Center's mission and pillars of excellence.
  • Perform other related duties as assigned.

REQUIRED MINIMUM EDUCATION
Bachelor's degree in Nursing, Allied Health, Information Technology, Computer Science, or a related field required.
Evidence of progressive leadership experience required.
REQUIRED MINIMUM CERTIFICATION
Active Epic certification in one or more clinical and/or ancillary applications (e.g., Beaker, Willow, Radiant).
REQUIRED MINIMUM EXPERIENCE
Minimum of three (3) years of progressive experience in clinical, financial, integration, analytics, or other healthcare operations.
REQUIRED MINIMUM SKILLS
  • Proven experience as an IT Systems Analyst or equivalent role
  • Experience in a hospital or rehabilitation setting preferred

PREFERRED QUALIFICATIONS
  • Prior experience managing or leading a clinical and/or ancillary applications team
  • Operational or IT experience supporting clinical or ancillary areas such as Lab, Pharmacy, or Radiology/Imaging, and/or integration/interface work
  • Experience with ServiceNow platform
  • Proficiency with Microsoft Office tools (Word, Excel, PowerPoint, Project, Visio)

The above statements are intended to describe the general nature and level of work performed by people assigned to this classification. They are not intended to be an exhaustive list of all job duties performed by the personnel so classified.

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