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Clinical Applications Manager Jobs (NOW HIRING)

Upward Health

Manager, Clinical Applications Solutions

$66K - $91K/yr

We are seeking a Manager, Clinical Applications Solutions to lead the design, development, and optimization of end-to-end clinical workflows within our various Clinical Applications, with particular ...

InnovAge

Director, Clinical Applications

Denver, CO · On-site +1

$159K - $215K/yr

Responsibilities The Director, Clinical Applications will plan, direct, and oversee all aspects of ... Balance demand management for multiple complex simultaneous projects, operational enhancements ...

InnovAge

Director, Clinical Applications

Denver, CO · On-site

Responsibilities The Director, Clinical Applications will plan, direct, and oversee all aspects of ... Balance demand management for multiple complex simultaneous projects, operational enhancements ...

RWJBarnabas Health

Applications Manager

Oceanport, NJ · On-site

$144K - $209K/yr

Information Technology and Systems / Clinical Informatics Status: Full-Time Shift: Day Facility ... Applications Manager Location: System Business Office Department Name: IT&S Behavioral Health Req ...

InnovAge

Director, Clinical Applications

Denver, CO

$159K - $270K/yr

Responsibilities The Director, Clinical Applications will plan, direct, and oversee all aspects of ... Balance demand management for multiple complex simultaneous projects, operational enhancements ...

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Clinical Applications Manager information

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$54K

$113.6K

$153K

How much do clinical applications manager jobs pay per year?

As of Jul 20, 2026, the average yearly pay for clinical applications manager in the United States is $113,560.00, according to ZipRecruiter salary data. Most workers in this role earn between $101,000.00 and $126,500.00 per year, depending on experience, location, and employer.

What does a clinical application manager do?

A clinical application manager oversees the implementation, maintenance, and optimization of clinical software systems used in healthcare settings. They collaborate with medical staff to ensure systems meet clinical needs, troubleshoot technical issues, and may coordinate training and updates, often requiring knowledge of healthcare workflows and IT tools.

What is a Clinical Applications Manager?

A Clinical Applications Manager oversees the implementation, management, and optimization of clinical software applications within healthcare organizations. They work closely with clinical staff, IT teams, and vendors to ensure that clinical information systems such as electronic health records (EHR) operate efficiently and meet the needs of healthcare providers. Their responsibilities often include training staff, troubleshooting issues, and ensuring compliance with healthcare regulations. This role requires a combination of technical knowledge, leadership skills, and an understanding of clinical workflows.

What are the key skills and qualifications needed to thrive as a Clinical Applications Manager, and why are they important?

To thrive as a Clinical Applications Manager, you need in-depth knowledge of clinical workflows, healthcare IT systems, and a relevant degree such as in health informatics or information technology. Familiarity with electronic health records (EHR), clinical decision support systems, and certifications like Epic or Cerner are typically required. Strong leadership, problem-solving abilities, and effective communication are vital soft skills for managing teams and interfacing with both technical and clinical stakeholders. These skills ensure the effective implementation, optimization, and support of clinical applications, directly impacting patient care and operational efficiency.

What is the difference between Clinical Applications Manager vs Clinical Systems Specialist?

AspectClinical Applications ManagerClinical Systems Specialist
CredentialsTypically requires a bachelor's degree in healthcare, IT, or related field; certifications like Epic or Cerner are commonOften holds similar degrees and certifications, focusing on specific clinical systems expertise
Work EnvironmentManages clinical software implementation, training, and support within healthcare facilitiesProvides technical support, troubleshooting, and system optimization for clinical software
Employer & Industry UsageUsed by hospitals, clinics, and healthcare organizations for system managementEmployed in similar settings, often working alongside Clinical Applications Managers

The Clinical Applications Manager and Clinical Systems Specialist roles overlap in healthcare IT, with the manager focusing on overseeing system deployment and staff training, while the specialist provides technical support and system troubleshooting. Both roles require clinical IT knowledge and certifications, but the manager has broader responsibilities in project management and team coordination.

Is being a MOA a good entry level job?

A Medical Office Assistant (MOA) role is often considered an entry-level position in healthcare, requiring basic administrative and clinical skills. It provides experience in patient interaction, medical records, and office management, which can serve as a foundation for advanced healthcare careers. However, it may require certification or training and typically offers limited responsibilities compared to more specialized roles.

What are some common challenges faced by Clinical Applications Managers when implementing new healthcare software systems?

Clinical Applications Managers often encounter challenges such as ensuring seamless integration with existing hospital systems, managing user adoption among clinical staff, and meeting regulatory compliance requirements. They must coordinate closely with IT, clinical teams, and vendors to address technical issues and workflow disruptions. Successful managers proactively communicate changes, provide thorough training, and gather feedback to optimize system performance and user satisfaction.

How much do clinical application specialists make in the US?

Clinical application specialists in the US typically earn between $70,000 and $110,000 annually, depending on experience, location, and certifications. They often work in healthcare or medical device companies, providing technical support and training for clinical software and equipment.

How much does an app manager make?

A Clinical Applications Manager typically earns between $80,000 and $130,000 annually, depending on experience, location, and the complexity of the clinical systems managed. Salaries may also include benefits such as bonuses, healthcare, and professional development opportunities, especially in healthcare or hospital settings where technical expertise and certifications are valued.
More about Clinical Applications Manager jobs
What cities are hiring for Clinical Applications Manager jobs? Cities with the most Clinical Applications Manager job openings:
What are the most commonly searched types of Clinical Applications jobs? The most popular types of Clinical Applications jobs are:
What states have the most Clinical Applications Manager jobs? States with the most job openings for Clinical Applications Manager jobs include:
What job categories do people searching Clinical Applications Manager jobs look for? The top searched job categories for Clinical Applications Manager jobs are:
Clinical Applications Manager jobs near you
Infographic showing various Clinical Applications Manager job openings in the United States as of July 2026, with employment types broken down into 1% As Needed, 77% Full Time, 18% Part Time, 1% Temporary, and 3% Contract. Highlights an 89% Physical, 2% Hybrid, and 9% Remote job distribution, with an average salary of $113,560 per year, or $54.6 per hour.
Clinical Applications Specialist

Clinical Applications Specialist

The Jackson Clinic

Jackson, TN • On-site

Full-time

Posted 19 days ago

The Jackson Clinic rating

6.7

Company rating: 6.7 out of 10

Based on 6 frontline employees who took The Breakroom Quiz

Job description

Clinical Applications Specialist
Location: Jackson, TN 38305
General Statement of Duties
Responsible for the support, maintenance, optimization, and day-to-day functionality of clinical software applications within the organization. Works closely with clinical staff and IT teams to ensure systems are operating efficiently and effectively to support patient care. Acts as a primary resource for troubleshooting, training, and workflow optimization related to Electronic Health Record (EHR) systems and other clinical applications. Assists with implementation, upgrades, and integration of healthcare technologies while ensuring alignment with organizational goals and regulatory requirements.
Customer Service Expectations
To promote, support, and actively participate in providing a high level of customer service demonstrated by following the four key principles to excellent customer satisfaction:
  1. Exceptional Customer Service - Make serving patients your number one priority.
  2. Positive Attitude - Display professionalism, empathy, and respect in all interactions.
  3. Consistency - Deliver a high level of service consistently to build trust and reliability.
  4. Team Collaboration - Work effectively with clinical and administrative teams.
Supervision
Supervision Received: Reports to IT Director
Supervision Exercised: None
Typical Physical Demands
  • Work requires sitting for extended periods.
  • Full range of motion including lifting, bending, reaching, and standing.
  • Manual dexterity sufficient to operate standard office equipment.
  • Vision correctable to 20/20 and normal hearing required.
  • Some travel between clinic locations may be necessary.
  • On-call availability required.
Typical Working Conditions
Work is performed in office and clinical environments. Position may involve high-volume support requests and require flexibility for after-hours system updates, upgrades, and go-live support. Position may require responding to urgent issues in a fast-paced healthcare setting.
Essential Duties
  1. Serve as a primary point of contact for clinical users regarding EHR systems, clinical applications, and healthcare technology solutions.
  2. Provide day-to-day support, troubleshooting, and issue resolution for clinical systems (e.g., Allscripts and other healthcare applications).
  3. Collaborate with clinical staff to analyze workflows, identify inefficiencies, and recommend system improvements.
  4. Assist with implementation, configuration, testing, and upgrades of clinical applications.
  5. Provide end-user training and develop training materials to improve system adoption and efficiency.
  6. Support system integrations and data exchange between applications using HL7 interfaces or similar technologies.
  7. Assist in maintaining system data integrity, user access, and application security.
  8. Develop and maintain reports, dashboards, and queries to support clinical and operational decision-making.
  9. Participate in system testing, validation, and change management processes.
  10. Document procedures, workflows, and troubleshooting steps for internal knowledge sharing.
  11. Assist with regulatory compliance efforts, including HIPAA and data security standards.
  12. Work with vendors and internal IT teams to resolve application issues and implement enhancements.
  13. Stay current with healthcare technology trends, EHR updates, and best practices.
  14. Participate in after-hours support as needed for system upgrades or critical issues.
  15. Other duties as assigned.
Performance Requirements: Knowledge, Skills, & Abilities
  • Strong knowledge of Electronic Health Record (EHR) systems (e.g., Allscripts or similar platforms)
  • Understanding of clinical workflows in an outpatient healthcare setting
  • Working knowledge of healthcare data exchange standards (HL7, interfaces, integrations)
  • Experience with reporting tools and data analysis
  • Familiarity with user access/security management within clinical systems
  • Understanding of HIPAA and healthcare compliance requirements
  • Strong troubleshooting and problem-solving skills
  • Excellent communication and end-user training abilities
  • Ability to work effectively with clinical, technical, and administrative staff
  • Strong organizational skills with attention to detail
  • Ability to manage multiple priorities in a fast-paced environment
  • Basic understanding of IT infrastructure concepts (networking, servers, databases) preferred
Requirements
Education
Associate or Bachelor's degree in Health Informatics, Computer Science, Nursing, or related field preferred.
Experience
2-4 years of experience in clinical applications support, healthcare IT, or clinical informatics, preferably in an outpatient multi-specialty environment.
Certification/License
Valid Tennessee driver's license
Alternative to Minimum Qualifications
Equivalent combination of education and experience may be considered.

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