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Internship Bioinformatics Software Engineer Jobs

Axle

Bioinformatics Scientist

Bethesda, MD

With experts in biomedical science, software engineering, and program management, we focus on ... What bioinformatics areas are you familiar with? (e.g., single cell, bulk genomics, transcriptomics ...

Axle

Bioinformatics Scientist

Bethesda, MD

With experts in biomedical science, software engineering, and program management, we focus on ... What bioinformatics areas are you familiar with? (e.g., single cell, bulk genomics, transcriptomics ...

BCC-NIH

Software Developer (C++, Python)

Bethesda, MD · On-site

Overview Black Canyon Consulting (BCC) is searching for a Software Developer in Bioinformatics and Big Data to support our work at the National Institutes of Health. This opportunity is full time and ...

BCC-NIH

Software Developer (C++, Python)

Bethesda, MD · On-site +1

Overview Black Canyon Consulting (BCC) is searching for a Software Developer in Bioinformatics and Big Data to support our work at the National Institutes of Health. This opportunity is full time and ...

Axle

Bioinformatics Engineer

Rockville, MD

With experts in biomedical science, software engineering, and program management, we focus on ... Axle is seeking a Bioinformatics Engineer to join our vibrant team at the National Institutes of ...

Axle

Bioinformatics Engineer

Rockville, MD

With experts in biomedical science, software engineering, and program management, we focus on ... Axle is seeking a Bioinformatics Engineer to join our vibrant team at the National Institutes of ...

Axle

Bioinformatics Engineer

Rockville, MD · On-site

With experts in biomedical science, software engineering, and program management, we focus on ... Axle is seeking a Bioinformatics Engineer to join our vibrant team at the National Institutes of ...

Baylor Genetics

Sr HPC Engineer

Houston, TX · On-site

$96K - $132K/yr

MS with extensive industry experience may be considered. • 8+ years' experience in bioinformatics software engineering, computational genomics, or related field. • 4+ years' experience leading or ...

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Internship Bioinformatics Software Engineer information

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How much do internship bioinformatics software engineer jobs pay per hour?

As of Jul 22, 2026, the average hourly pay for internship bioinformatics software engineer in the United States is $25.42, according to ZipRecruiter salary data. Most workers in this role earn between $20.67 and $28.85 per hour, depending on experience, location, and employer.

What is the difference between Internship Bioinformatics Software Engineer vs Bioinformatics Data Analyst?

AspectInternship Bioinformatics Software Engineer
Required CredentialsEnrolled in or recent graduate of Computer Science, Bioinformatics, or related fields
Work EnvironmentResearch labs, biotech companies, or academic institutions
Employer & Industry UsageUsed in biotech, pharmaceutical, and research organizations for software development
Common Search & ComparisonCompared for entry-level software development roles in bioinformatics

While both roles involve working with biological data, an Internship Bioinformatics Software Engineer focuses on developing software tools and algorithms, often requiring programming skills and software development knowledge. A Bioinformatics Data Analyst primarily analyzes biological data, using statistical and data visualization tools. The internship provides hands-on experience in coding and software creation, whereas a data analyst role emphasizes data interpretation and reporting.

What does an Internship Bioinformatics Software Engineer do?

An Internship Bioinformatics Software Engineer assists in developing and maintaining software tools used to analyze biological data, such as DNA sequences or protein structures. They often work under the supervision of senior engineers and scientists to write code, troubleshoot issues, and implement algorithms for biological research. Interns may also help process large datasets, visualize results, and collaborate with interdisciplinary teams. This role provides hands-on experience in both software development and the application of computational methods to biological problems.

What types of projects do Internship Bioinformatics Software Engineers typically work on, and how do these projects contribute to their professional development?

Internship Bioinformatics Software Engineers often work on projects involving the development and optimization of software tools for analyzing large biological datasets, such as genomic sequences or protein structures. These projects frequently require collaboration with biologists and data scientists, offering valuable exposure to interdisciplinary teamwork. Interns may be tasked with writing code, testing algorithms, or visualizing data, all of which build practical skills in both software engineering and bioinformatics. This hands-on experience not only enhances technical proficiency but also helps interns better understand real-world applications in life sciences, setting a strong foundation for future career growth.

What are the key skills and qualifications needed to thrive as an Internship Bioinformatics Software Engineer, and why are they important?

To thrive as an Internship Bioinformatics Software Engineer, you need a foundational understanding of programming (often in Python, R, or Java), basic knowledge of molecular biology or genomics, and current pursuit of a degree in bioinformatics, computer science, or a related field. Familiarity with bioinformatics tools (such as BLAST, Bioconductor, or Galaxy), version control systems like Git, and experience analyzing biological datasets are typically expected. Strong problem-solving abilities, attention to detail, and effective communication skills help interns collaborate and learn in multidisciplinary teams. These skills and qualities ensure interns can contribute to meaningful research, adapt quickly to new technologies, and facilitate teamwork in complex scientific environments.
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Internship Bioinformatics Software Engineer jobs near you
Infographic showing various Internship Bioinformatics Software Engineer job openings in the United States as of July 2026, with employment types broken down into 5% As Needed, 66% Full Time, 10% Part Time, 1% Temporary, 1% Contract, and 17% Nights. Highlights an 80% Physical, 3% Hybrid, and 17% Remote job distribution, with an average salary of $52,867 per year, or $25.4 per hour.
Bioinformatics Software Engineer II, Pathology and Lab Medicine

Bioinformatics Software Engineer II, Pathology and Lab Medicine

Memorial Sloan

Manhattan, NY • On-site

$100K - $161K/yr

Other

Posted 15 days ago

Memorial Sloan Kettering Cancer Center rating

8.5

Company rating: 8.5 out of 10

Based on 133 frontline employees who took The Breakroom Quiz

15th of 888 rated healthcare providers

Job description

Job details

About Us:

The people of Memorial Sloan Kettering Cancer Center (MSK) are united by a singular mission: ending cancer for life. Our specialized care teams provide personalized, compassionate, expert care to patients of all ages. Informed by basic research done at our Sloan Kettering Institute, scientists across MSK collaborate to conduct innovative translational and clinical research that is driving a revolution in our understanding of cancer as a disease and improving the ability to prevent, diagnose, and treat it. MSK is dedicated to training the next generation of scientists and clinicians, who go on to pursueour missionat MSK and around the globe.

Exciting Opportunity at MSK! Our Pathology and Laboratory Medicine Department is looking for aBioinformatics Software Engineerto join a dynamic team supporting stateoftheart molecular diagnostics and cancer genomics programs. You will play a key role in developing software tools, web applications, and data workflows that empower our clinicians and researchers to interpret complex genomic information and advance precision oncology.

Role Overview

* Build web applications and APIs that enable genomic data visualization and clinical reporting

* Collaborate closely with bioinformaticians, laboratory scientists, researchers, and clinicians to translate workflow needs into robust software solutions

* Develop,optimize, andmaintaincomputational workflows for NGS data processing

* Improve performance, scalability, and reliability of existing pipelines and tools

* Ensure data quality, reproducibility, and proper documentation across all projects

Key Qualifications

* BS in Bioinformatics, Computer Science, or related field + 5 years of experienceORMS in Bioinformatics, Computer Science, or related field + 2 years of experience

* Strong programming skills in Python

* Experience in web development (e.g., Flask, Django, React)

* Experience with relational databases (PostgreSQL, MySQL) and/or NoSQL (MongoDB)

* Hands-on experience with containerization (Docker, Kubernetes)

* Familiarity with version control (Git/GitHub) and CI/CD workflows

* Understanding of NGS data analysis workflows

* Strong debugging, analytical, and problem-solving skills

Preferred:

* Experience with cloud computing (AWS, GCP, or Azure)

* Knowledge of cancer genomics, variant calling, and annotation

Core Skills

* Ability to translate scientific and clinical needs into maintainable, welldesigned software

*Strong communicationskills and comfort collaborating with multidisciplinary teams

* Ability to work in fastpaced research and clinical environments

* Commitment to reproducible, traceable, and welldocumented work

Additional Information

*Schedule: hybrid, at least 2 days a week in office, mustresidein the NYC metro area

* Location:Joy Building, 321 E 61stStreet, NYC

*Reporting to: Manager, Bioinformatics Pathology and Laboratory Medicine

Helpful Links:

  • Compensation Philosophy

  • Benefits

Pay Range: $100,600.00 - $161,000.00 FSLA Status: Exempt

Closing:

At MSK, we believe in fair, competitive pay that reflects your job, experience, and skills.

MSK is an equal opportunity and affirmative action employer committed to diversity and inclusion in all aspects of recruiting and employment. All qualified individuals are encouraged to apply and will receive consideration without regard to race, color, gender, gender identity or expression, sexual orientation, national origin, age, religion, creed, disability, veteran status or any other factor which cannot lawfully be used as a basis for an employment decision.

Federal law requires employers to provide reasonable accommodation to qualified individuals with disabilities. Please tell us if you require a reasonable accommodation to apply for a job or to perform your job. Examples of reasonable accommodation include making a change to the application process or work procedures, providing documents in an alternate format, using a sign language interpreter, or using specialized equipment.

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