ZipRecruiter

Log In

1

Biotech Software Engineer Jobs in Indiana (NOW HIRING)

Danaher

Electrical Engineer

Indianapolis, IN · On-site

... biotechnology? At Beckman Coulter Life Sciences, one of Danaher's 15+ operating companies, our work ... Experienced in using electronic circuit simulation/modeling software. * Experience in product ...

Danaher

Electrical Engineer

Indianapolis, IN · On-site

... biotechnology? At Beckman Coulter Life Sciences, one of Danaher's 15+ operating companies, our work ... Experienced in using electronic circuit simulation/modeling software. * Experience in product ...

Visium Resources, Inc.

Be Seen First

Project Manager - Senior CQV Pharmaceutical

Indianapolis, IN · On-site

Kneat or other software) is a major asset but not required. * Capital Improvements experience is a ... Key Responsibilities: * Lead all CQV project activities for pharmaceutical and biotech ...

EKF DIAGNOSTICS INC

Bioprocess Engineer

South Bend, IN · On-site

$75K - $95K/yr

... Biotechnology, Biology, Chemistry). * At least 2 years of hands-on experience in industrial ... software to monitor, control, and optimize fermentation and DSP sequences. * Industrial plant ...

EKF DIAGNOSTICS INC

Bioprocess Engineer

South Bend, IN

$75K - $95K/yr

... Biotechnology, Biology, Chemistry). * At least 2 years of hands-on experience in industrial ... software to monitor, control, and optimize fermentation and DSP sequences. * Industrial plant ...

EKF Diagnostics Inc

Bioprocess Engineer

South Bend, IN · On-site

... Biotechnology, Biology, Chemistry). * At least 2 years of hands-on experience in industrial ... software to monitor, control, and optimize fermentation and DSP sequences. * Industrial plant ...

next page

Showing results 1-20

People also search for

All JobsBiotech Software Engineer JobsBiotech Software Engineer Jobs in Indiana

Biotech Software Engineer information

See Indiana salary details

$60.4K

$140.4K

$195.5K

How much do biotech software engineer jobs pay per year?

As of Jun 1, 2026, the average yearly pay for biotech software engineer in Indiana is $140,378.00, according to ZipRecruiter salary data. Most workers in this role earn between $114,200.00 and $164,600.00 per year, depending on experience, location, and employer.

What is a Biotech Software Engineer job?

A Biotech Software Engineer develops software solutions for the biotechnology industry, enabling research, data analysis, and automation in fields like genomics, bioinformatics, and drug discovery. They work with scientists to design algorithms, manage biological data, and create applications that support experiments and workflows. This role requires expertise in programming, cloud computing, and biological sciences to bridge the gap between technology and life sciences.

What are the key skills and qualifications needed to thrive in the Biotech Software Engineer position, and why are they important?

To thrive as a Biotech Software Engineer, you need a solid background in computer science or software engineering, coupled with an understanding of biology, genetics, or related life sciences. Familiarity with programming languages such as Python or Java, experience using bioinformatics tools (like BLAST or Bioconductor), and, in some settings, knowledge of regulatory standards are highly valuable. Strong problem-solving abilities, effective communication, and the ability to work well in interdisciplinary teams distinguish top performers in this field. These skills are crucial for building reliable software solutions that support scientific discovery and innovation in biotechnology organizations.

What are some typical projects or daily tasks for a Biotech Software Engineer?

As a Biotech Software Engineer, you'll often develop and maintain software tools for analyzing biological data, automate laboratory workflows, or create user-friendly interfaces for scientific researchers. Your daily tasks might include writing code, troubleshooting algorithms, reviewing scientific data, and collaborating closely with biologists, data scientists, and laboratory technicians. Depending on the company, you may be involved in developing cloud-based platforms, integrating new laboratory hardware, or ensuring software compliance with industry regulations. This dynamic and collaborative environment means your work directly impacts ongoing research and helps accelerate scientific discoveries in the biotech sector.
More about Biotech Software Engineer jobs
What are popular job titles related to Biotech Software Engineer jobs in Indiana? For Biotech Software Engineer jobs in Indiana, the most frequently searched job titles are:
What job categories do people searching Biotech Software Engineer jobs in Indiana look for? The top searched job categories for Biotech Software Engineer jobs in Indiana are:
Biotech Software Engineer jobs near you
Infographic showing various Biotech Software Engineer job openings in Indiana as of May 2026, with employment types broken down into 89% Full Time, 9% Part Time, and 2% Contract. Highlights an 100% Physical job distribution, with an average salary of $140,378 per year, or $67.5 per hour.

Automation Engineer (multiple openings)

Simtra BioPharma Solutions

Bloomington, IN • On-site

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 12 days ago

Job description

Simtra BioPharma Solutions (Simtra) is a world-class Contract Development Manufacturing Organization, partnering with pharmaceutical and biotech companies to bring their sterile injectable products to market. With facilities in Bloomington, Indiana, US and Halle/Westfalen, Germany, we offer a wide range of delivery systems including pre-filled syringes, liquid/lyophilized vials, diluents for reconstitution, powder-filled vials and sterile crystallization.
Our product types include biologics and small molecules, cytotoxics, highly potent compounds, diluents for reconstitution and vaccines - which are all directly injected into patients worldwide. As such, there is a strong emphasis on quality and continuous improvement at Simtra. We hold ourselves to the highest quality and regulatory standards.
While our primary focus is cGMP manufacturing, we offer many support services including formulation and development, lyophilization optimization, global regulatory support and secondary packaging. Our teams are driven to help clients scale, innovate and bring life-changing medicines to patients worldwide.
Why join Team Simtra?Because we:
Make it HAPPEN - We bring a growth mindset to every opportunity, developing new skillsets and exceeding our expectations and those of our customers.
Make it TOGETHER - We work as one, respecting each voice and tapping into our unique strengths across teams-so we can solve problems in new ways.
Make it RIGHT - We hold ourselves to a high standard of excellence, fulfilling our commitments to the customer, their patients, and our team members.
Make it COUNT - We take pride in our day-to-day work, knowing the impact we make - taking on challenges big and small to improve patient health.
This role:
We are looking for Automation Engineers (level depends on experience) that are responsible for leading the identification, implementation, optimization, and maintenance of process automation and controls systems in pharmaceutical processing, packaging, and facilities. These engineers ensure efficient, quality, functional, and compliant process automation systems and supports engineering systems, capital projects, technical services, and plant support, as applicable. These positions are 100% onsite at the Bloomington, Indiana facility and reports directly to the Sr. Manager, Automation Engineering.
The responsibilities:
  • Lead various aspects of support needed in the design, development, and implementation of the site process automation and controls systems
  • Develop, modify, and troubleshoot PLC & HMI programs
  • Specify and configure ins
  • Identify and drive improvement opportunities for equipment, instrument, and process optimization, efficiency, and cost reduction through automation technologies and lead initiatives to implement projects
  • Lead the deployment of the full system lifecycle for process automation and control systems including the design, assessment, selection, commissioning, validation, and implementation of systems
  • Troubleshoot automation and controls systems issues, conduct root causes analysis, and implement corrective actions to minimize downtime and ensure continuous operations
  • Conduct risk assessments of automation and controls systems
  • Ensure automation and controls systems meet regulatory requirements by conducting and assisting with validation activities

Required qualifications:
  • Level I: BS in Engineering (Computer, Electrical, Computer Science, Systems Engineering and Design, or related field) or 6+ years of relevant experience
  • Level II: BS in Engineering (Computer, Electrical, Computer Science, Systems Engineering and Design, or related field) or 10+ years of relevant experience
  • Level III/Sr: BS in Engineering (Computer, Electrical, Computer Science, Systems Engineering and Design, or related field) and 6+ years of relevant experience
  • Level IV/Principal: BS in Engineering (Computer, Electrical, Computer Science, Systems Engineering and Design, or related field) and 10+ years of relevant experience
  • Level V/Sr. Principal: BS in Engineering (Computer, Electrical, Computer Science, Systems Engineering and Design, or related field) and 15+ years of relevant experience
  • Work experience in process automation and controls systems (including programming PLCs, SCADA, and HMI systems) in pharmaceutical and/or manufacturing environments
  • Experience in reading and interpreting electrical schematics and Process & Instrumentation Diagrams (P&IDs)
  • Experience in Ignition SCADA/HMI
  • Knowledge of coding in Rockwell and Siemens (PLCs and HMIs)
  • Knowledge of automation and controls hardware and software systems
  • Ability to prioritize projects and workload
  • Excellent verbal communication and technical writing skills

Physical/safety requirements:
  • Duties may require overtime work, including nights and weekends
  • Position requires sitting for long hours, but may also involve walking or standing for long periods of time
  • Variable travel of 0-10% could be expected
  • Must be able to lift, push, pull, and carry up to 50 lbs
  • Must be able to lift 20 lbs overhead
  • Must be able to wear personal protective equipment (PPE), as required

In return, you'll be eligible for [1]:
  • Day One Benefits
    • Medical & Dental Coverage
    • Flexible Spending Accounts
    • Life and AD&D Insurance
    • Supplemental Life Insurance
      • Spouse Life Insurance
      • Child Life Insurance
    • 401(k) Retirement Savings Plan with Company Match
    • Time Off Program
      • Paid Holidays
      • Paid Time Off
      • Paid Parental Leave and more
    • Adoption Reimbursement Program
    • Education Assistance Program
    • Employee Assistance Program
    • Community and Volunteer Service Program
  • Additional Benefits
    • Short and Long-Term Disability Insurance
    • Voluntary Insurance Benefits
      • Vision Coverage
      • Accident
      • Critical Illness
      • Hospital Indemnity Insurance
      • Identity Theft Protection
      • Legal and more
    • Onsite Campus Amenities
      • Workout Facility
      • Cafeteria
      • Credit Union

[1] Current benefit offerings are in effect through 12/31/26
Disclaimer
This job description is intended to provide the minimum knowledge, skills and abilities necessary to perform the job. It may not be inclusive of all the duties and responsibilities of the job. Simtra reserves the right to make modifications based on business requirements.
Equal Employment Opportunity
Simtra is proud to be an equal opportunity employer. Simtra evaluates qualified applicants without regard to race, color, religion, gender, national origin, age, sexual orientation, gender identity or expression, protected veteran status, disability/handicap status or any other legally protected characteristic.
Data Privacy
To learn more about Simtra's approach to data privacy, please review the Simtra Recruitment Platform Global Privacy Policy: https://simtra.com/privacy-policy/

Apply