2

Remote Nonprofit Controller Jobs (NOW HIRING)

Be Seen First

Overview We're hiring a Financial Controller to take ownership of our firm's internal operations ... from a non-profit, governmental, or public accounting background. We're looking for someone ...

*Revised* Controller

Elko, NV · On-site +1

$86K - $125K/yr

Two years in higher education, government, or nonprofit accounting is highly desirable. * Master ... Work Environment This position is eligible for remote work within the State of Nevada. The ...

Showing results 21-40

Remote Nonprofit Controller information

See salary details

$55K

$119.5K

$175.5K

How much do remote nonprofit controller jobs pay per year?

As of Aug 23, 2026, the average yearly pay for remote nonprofit controller in the United States is $119,497.00, according to ZipRecruiter salary data. Most workers in this role earn between $97,000.00 and $138,500.00 per year, depending on experience, location, and employer.

What is a remote nonprofit controller?

A Remote Nonprofit Controller is a financial professional who manages the accounting and financial reporting functions for a nonprofit organization while working remotely. They are responsible for overseeing budgets, preparing financial statements, ensuring compliance with regulations, and supporting the executive team in financial decision-making. Their work helps maintain transparency and accountability in the organization's use of funds, even though they do not work on-site. Remote Nonprofit Controllers often use cloud-based accounting systems and digital communication tools to collaborate with team members.

What are the key skills and qualifications needed to thrive as a remote nonprofit controller?

To thrive as a Remote Nonprofit Controller, you need expertise in nonprofit accounting, financial reporting, and a bachelor's degree in accounting or finance, often accompanied by a CPA or similar certification. Familiarity with accounting software like QuickBooks, fund accounting systems, and nonprofit grant management tools is typical. Strong organizational skills, attention to detail, and effective communication are crucial soft skills for collaborating remotely and managing multiple funding sources. These competencies ensure accurate financial oversight, regulatory compliance, and mission-driven stewardship of nonprofit resources.

How does a remote nonprofit controller effectively collaborate with program staff and executive leadership to ensure accurate financial reporting?

As a Remote Nonprofit Controller, you will frequently collaborate with program managers and executive leadership through regular virtual meetings and cloud-based financial systems. You’ll be responsible for translating program activities into accurate financial data, clarifying budget variances, and providing guidance on fiscal compliance. Effective communication skills and proficiency with collaborative financial software are essential, as you’ll often need to explain complex financial concepts to non-financial colleagues and support strategic decision-making across the organization.

What is the difference between Remote Nonprofit Controller vs Remote Nonprofit Accountant?

AspectRemote Nonprofit ControllerRemote Nonprofit Accountant
CredentialsCPA or equivalent, accounting degreeAccounting degree, CPA preferred but not required
Work EnvironmentOversees financial strategy, manages accounting teamHandles day-to-day bookkeeping, prepares financial reports
Employer & Industry UsageNonprofit organizations, often in leadership rolesNonprofits, supporting financial record-keeping
Search & Comparison IntentUnderstanding strategic financial managementFocus on accounting tasks and compliance

The Remote Nonprofit Controller typically holds a CPA and manages financial strategy and oversight, while the Remote Nonprofit Accountant focuses on daily bookkeeping and reporting. Both roles are essential in nonprofit finance but differ in scope and responsibilities.

More about Remote Nonprofit Controller jobs

What cities are hiring for Remote Nonprofit Controller jobs?

Cities with the most Remote Nonprofit Controller job openings:

What are the most commonly searched types of Nonprofit Controller jobs?

The most popular types of Nonprofit Controller jobs are:

What states have the most Remote Nonprofit Controller jobs?

States with the most job openings for Remote Nonprofit Controller jobs include:

Infographic showing various Remote Nonprofit Controller job openings in the United States as of August 2026, with employment types broken down into 1% Internship, 3% As Needed, 75% Full Time, 20% Part Time, and 1% Contract. Highlights an 92% Physical, 3% Hybrid, and 5% Remote job distribution, with an average salary of $119,497 per year, or $57.5 per hour.

Assistant Controller, Outsourced Accounting, Nonprofit Industry Clients

Wipfli Advisory LLC

Naperville, IL • Remote

$77K - $104K/yr

Full-time

Medical, Dental, Vision, Life, Retirement

Posted 27 days ago


Job description

Overview

At Wipfli, people count.

At Wipfli, our people are core to everything we do-the catalyst behind our ability to create exceptional impact and extraordinary results.

We believe in flexibility. We focus on relationships. We encourage each individual to follow their own path.

People truly matter and they feel it. For those looking to make a difference and find a professional home, Wipfli offers a career-defining opportunity.

Do you want to take your accounting career to the next level and make a real difference?  Wipfli's client advisory services team is growing, and we are looking for a Senior Accountant to help our nonprofit clients thrive. You'll get to assist with meaningful work, build deep client relationships, and grow with a team that is all about support, impact, and innovation. 

This role supports a 100% remote work arrangement.

Responsibilities

WHAT YOU'LL DO

  • Manage day-to-day financial reporting accuracy for assigned clients.
  • Assist with complex general ledgers, identifying missing transactions and trends to ensure overall accuracy.
  • Guide the review and approval of account classifications.
  • Review balance sheets for accuracy and facilitate follow-up.
  • Coordinate project tasks to ensure efficient client workflow.
  • Prepare and/or review the initial draft of monthly reporting packages, including KPIs/metrics.
  • Prepare and finalize month-end close.
  • Maintain and update the client procedure manual to ensure appropriate process documentation.
  • Prepare and/or review work papers and schedules to ensure completeness and accuracy.
  • Participate in cross-collaboration with other teams/service lines, as applicable.
  • Assist in estimating and managing work assignments of accountants to meet client needs and budget constraints.
  • Assist in the development of best practices.
Knowledge, Skills and Abilities

WHAT WE SEEK

  • Bachelor's degree in accounting or finance required.
  • CPA certification preferred.
  • Experience in public accounting e.g. outsourced accounting or audit preferred.
  • Minimum of 5 years of accounting experience, with a focus on financial reporting and general ledger management.
  • Experience with nonprofit federal grant processing and reporting required.
  • Strong understanding of accounting principles and month-end close processes.
  • Excellent analytical and problem-solving skills.
  • Proficient in accounting software and Microsoft Office Suite.
  • Strong communication and interpersonal skills.
  • Ability to project manage multiple tasks and meet deadlines.

Estella Anderson, from our recruiting team, will be guiding you through this process. Visit her LinkedIn page to connect! 

 #LI-REMOTE

#LI-EA1

Additional Details

Additional Details:

Wipfli is an equal opportunity/affirmative action employer. All candidates will receive consideration for employment without regards to race, creed, color, religion, national origin, sex, age, marital status, sexual orientation, gender identify, veteran status, disability, or any other characteristics protected by federal, state, or local laws.

Wipfli is committed to providing reasonable accommodations for people with disabilities. If you require a reasonable accommodation to complete an application, interview, or participate in our recruiting process, please send us an email at hr@wipfli.com

Wipfli values fair, transparent, and competitive compensation, considering each candidate's unique skills and experiences. The estimated base pay range for this role is $77,000 to $104,000 with offers typically not made at the maximum, allowing for future salary increases. The actual salary at the time of offer depends on business related factors like location, skills, experience, training/education, licensure, certifications, business needs, current associate pay, and relevant employment laws.

Individuals may be eligible for an annual discretionary bonus, subject to participation rules and based on a variety of factors including, but not limited to, individual and Firm performance.

Wipfli cares about our associates and offers a variety of benefits to support their well-being. Highlights include 8 health plan options (both HMO & PPO plans), dental and vision coverage, opportunity to enroll in HSA with potential Firm contribution and an Employee Assistance Program. Other benefits include firm-sponsored basic life and short and long-term disability coverage, a 401(k) savings plan & profit share as well as Firm matching contribution, well-being incentive, education & certification assistance, flexible time off, family care leave, parental leave, family formation benefits, cell phone reimbursement, and travel rewards. Voluntary benefit offerings include critical illness & accident insurance, hospital indemnity insurance, legal, long-term care, pet insurance, ID theft protection, and supplemental life/AD&D. Eligibility for all benefits programs is dependent on annual hours expectation, position status/level and location.

Employment Type: FULL_TIME