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Remote Nonprofit Controller Jobs (NOW HIRING)

CDP

Controller

Washington, DC · On-site +1

$108K - $121K/yr

Flexible (remote); Must be located and eligible to work in the U.S. now and in the future. Must be ... In 2020, CDP was a featured nonprofit for the14thAnnual CNN Heroes: An All-Star Tribute. * CDP has ...

CDP

Controller

Washington, DC · On-site +1

$108K - $121K/yr

Flexible (remote); Must be located and eligible to work in the U.S. now and in the future. Must be ... In 2020, CDP was a featured nonprofit for the14thAnnual CNN Heroes: An All-Star Tribute. * CDP has ...

e2E

Controller - Consulting

Kansas City, MO · On-site +1

Controller 519 Southwest Blvd, Kansas City, MO 64108, USA This position is based in the Kansas City ... remote or hybrid work arrangements. e2E helps startups, small businesses, and nonprofits ...

e2E, LLC

Controller - Consulting

Kansas City, MO · On-site +1

$95K - $110K/yr

Controller 519 Southwest Blvd, Kansas City, MO 64108, USA This position is based in the Kansas City ... remote or hybrid work arrangements. e2E helps startups, small businesses, and nonprofits ...

Acara Solutions

Controller

Buffalo, NY · On-site +1

$80K - $90K/yr

Overview Our client is a nonprofit organization with a strong foundation and a longstanding ... This position requires regular in-office work and is not eligible for fully remote arrangement.

SPRCHRGR

Senior Controller

Los Angeles, CA · Remote

$50 - $60/hr

... nonprofits located all across the US. We specialize in cutting-edge technology and partner with ... Experience in a remote environment is a plus * Clear and concise communication - both written and ...

LIMRA AND LOMA

Assistant Controller

Windsor, CT · On-site +1

Full Remote or Hybrid to Windsor, Connecticut What You'll Do: * Manage oversight of the daily ... Preferred experience in both for-profit and non-profit environments, with a solid understanding of ...

All In One Accounting, Inc

CFO - Nonprofit

$60 - $90/hr

You'll work alongside Controllers and Accountants to ensure comprehensive financial leadership that ... We strive to meet team members where they're at - so our roles vary between onsite and fully remote.

International Justice Mission

... remote for non-local candidates. It reports to the Senior Vice President, Accounting and is only ... At least fifteen years' experience as an accounting or audit manager, including nonprofit and ...

Maventri

Senior Bookkeeper (Remote)

Ashburn, VA · Remote

$25 - $30/hr

Support Controller review process Nonprofit & Government Contractor Accounting * Maintain proper ... Hourly rate commensurate with experience * Part-time, remote position Ideal Candidate This role is ...

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All JobsRemote Nonprofit Controller Jobs

Remote Nonprofit Controller information

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$55K

$119.5K

$175.5K

How much do remote nonprofit controller jobs pay per year?

As of Jun 23, 2026, the average yearly pay for remote nonprofit controller in the United States is $119,497.00, according to ZipRecruiter salary data. Most workers in this role earn between $97,000.00 and $138,500.00 per year, depending on experience, location, and employer.

What is the difference between Remote Nonprofit Controller vs Remote Nonprofit Accountant?

AspectRemote Nonprofit ControllerRemote Nonprofit Accountant
CredentialsCPA or equivalent, accounting degreeAccounting degree, CPA preferred but not required
Work EnvironmentOversees financial strategy, manages accounting teamHandles day-to-day bookkeeping, prepares financial reports
Employer & Industry UsageNonprofit organizations, often in leadership rolesNonprofits, supporting financial record-keeping
Search & Comparison IntentUnderstanding strategic financial managementFocus on accounting tasks and compliance

The Remote Nonprofit Controller typically holds a CPA and manages financial strategy and oversight, while the Remote Nonprofit Accountant focuses on daily bookkeeping and reporting. Both roles are essential in nonprofit finance but differ in scope and responsibilities.

What is a Remote Nonprofit Controller?

A Remote Nonprofit Controller is a financial professional who manages the accounting and financial reporting functions for a nonprofit organization while working remotely. They are responsible for overseeing budgets, preparing financial statements, ensuring compliance with regulations, and supporting the executive team in financial decision-making. Their work helps maintain transparency and accountability in the organization's use of funds, even though they do not work on-site. Remote Nonprofit Controllers often use cloud-based accounting systems and digital communication tools to collaborate with team members.

How does a Remote Nonprofit Controller effectively collaborate with program staff and executive leadership to ensure accurate financial reporting?

As a Remote Nonprofit Controller, you will frequently collaborate with program managers and executive leadership through regular virtual meetings and cloud-based financial systems. You’ll be responsible for translating program activities into accurate financial data, clarifying budget variances, and providing guidance on fiscal compliance. Effective communication skills and proficiency with collaborative financial software are essential, as you’ll often need to explain complex financial concepts to non-financial colleagues and support strategic decision-making across the organization.

What are the key skills and qualifications needed to thrive as a Remote Nonprofit Controller, and why are they important?

To thrive as a Remote Nonprofit Controller, you need expertise in nonprofit accounting, financial reporting, and a bachelor's degree in accounting or finance, often accompanied by a CPA or similar certification. Familiarity with accounting software like QuickBooks, fund accounting systems, and nonprofit grant management tools is typical. Strong organizational skills, attention to detail, and effective communication are crucial soft skills for collaborating remotely and managing multiple funding sources. These competencies ensure accurate financial oversight, regulatory compliance, and mission-driven stewardship of nonprofit resources.
More about Remote Nonprofit Controller jobs
What cities are hiring for Remote Nonprofit Controller jobs? Cities with the most Remote Nonprofit Controller job openings:
What are the most commonly searched types of Nonprofit Controller jobs? The most popular types of Nonprofit Controller jobs are:
What states have the most Remote Nonprofit Controller jobs? States with the most job openings for Remote Nonprofit Controller jobs include:
What job categories do people searching Remote Nonprofit Controller jobs look for? The top searched job categories for Remote Nonprofit Controller jobs are:
Remote Nonprofit Controller jobs near you
Infographic showing various Remote Nonprofit Controller job openings in the United States as of June 2026, with employment types broken down into 85% Full Time, and 15% Part Time. Highlights an 100% Remote job distribution, with an average salary of $119,497 per year, or $57.5 per hour.
PT Remote Controller (Credit Union Industry)

PT Remote Controller (Credit Union Industry)

Charles River CFO

Boston, MA • Remote

Part-time

Posted yesterday

Job description

Salary:

Charles River CFO, Inc. (CRCFO) is seeking an experienced Fractional and/or Interim Controller to join our growing team supporting clients in the credit union industry.


This is a part-time, REMOTE position (030 hours per week). The role may be structured as ongoing fractional support or as an interim engagement, depending on client needs and candidate availability.


We are looking for a seasoned financial professional with 10+ years of experience as a Controller, ideally within a credit union or banking environment, who can provide strategic leadership and hands-on financial oversight to our clients.


About the Role:
Working as an embedded member of our clients organization, you will serve as the primary accounting leaderthe go-to Controller for both staff and executive leadership. You will oversee all accounting and financial reporting functions, ensuring compliance with GAAP and NCUA regulations while supporting the credit unions operational and strategic objectives.


Key Responsibilities:

  • Lead all accounting operations in support of executive management
  • Ensure compliance with GAAP, NCUA, and other regulatory reporting requirements
  • Coordinate annual financial audits and quarterly reviews with external auditors
  • Implement and maintain effective accounting and internal control frameworks
  • Manage internal control audits and risk assessments
  • Analyze and report monthly, quarterly, and annual financial results
  • Prepare materials and presentations for management and board meetings
  • Oversee treasury management, liquidity, and cash flow forecasting
  • Assist with budgeting, financial planning, and performance analysis


Qualifications:

  • Bachelors degree in Accounting, Finance, or related field (required)
  • CPA strongly preferred
  • Minimum of 10 years of progressive experience in senior finance or controller roles
  • Prior credit union or banking experience required
  • Strong knowledge of ERP systems and experience with conversions or implementations
  • Excellent analytical, communication, and leadership skills
  • Client-service focus with the ability to build trusted partnerships


About Charles River CFO, Inc.
Since 2003, Charles River CFO, Inc. has been a trusted provider of Fractional, Interim, and Outsourced Financial Leadership services. We partner with clients across industriesincluding life sciences, banking, high technology, manufacturing, professional services, and nonprofit organizationsto deliver strategic financial management and operational support. Our team helps organizations achieve financial clarity, strengthen controls, and prepare for critical growth events such as mergers, acquisitions, and system implementations.


Equal Opportunity Statement:
Charles River CFO, Inc. is proud to be an Equal Opportunity Employer. We value diversity and are committed to creating an inclusive workplace for all employees. All qualified applicants are encouraged to apply. www.crcfo.com