Bioinformatics Scientist
Alameda, CA · On-site
Bioinformatics Scientist | South San Francisco, CA (Remote Flex) I'm working on a retained search ... Production experience with Nextflow or Snakemake, including cloud deployments * Strong Python ...
Bioinformatics Scientist
Alameda, CA · On-site
Bioinformatics Scientist | South San Francisco, CA (Remote Flex) I'm working on a retained search ... Production experience with Nextflow or Snakemake, including cloud deployments * Strong Python ...
... Nextflow, Snakemake, or similar workflow managers • Docker experience • Familiarity with LLMs or AI/ML tools • Experience across multiple biomedical domains • Startup or biotech/pharma ...
... Nextflow, Snakemake, or similar workflow managers • Docker experience • Familiarity with LLMs or AI/ML tools • Experience across multiple biomedical domains • Startup or biotech/pharma ...
Senior Bioinformatics Engineer II
Cambridge, MA · On-site
$146 - $234/hr
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
Senior Bioinformatics Engineer II
Cambridge, MA · On-site
$146 - $234/hr
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
Bioinformatics Engineer, Pipelines
San Francisco, CA · On-site
$150K - $200K/yr
You will architect Nextflow and nf-core style pipelines, implement modality-specific validation and ... Design and maintain production grade bioinformatics pipelines for a wide range of data modalities ...
Quick apply
Bioinformatics Engineer, Pipelines
San Francisco, CA · On-site
$150K - $200K/yr
You will architect Nextflow and nf-core style pipelines, implement modality-specific validation and ... Design and maintain production grade bioinformatics pipelines for a wide range of data modalities ...
$146 - $234/hr
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
$146 - $234/hr
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Winter Park, FL · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Quick apply
Bioinformatics Scientist
Winter Park, FL · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Bioinformatics Scientist
Winter Park, FL · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Winter Park, FL · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
NextFlow, Luigi, Snakemake, NextFlow preferred), version control systems (Git preferred), Cloud ... Experience with bioinformatics software and an understanding of neoantigen therapies * Proven ...
Bioinformatics Scientist
Ann Arbor, MI · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Ann Arbor, MI · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Build and maintain NGS analysis pipelines (e.g., Nextflow) to support quality control and ... Design and implement novel bioinformatics algorithms for sequence analysis and synthetic biology ...
Build and maintain NGS analysis pipelines (e.g., Nextflow) to support quality control and ... Design and implement novel bioinformatics algorithms for sequence analysis and synthetic biology ...
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Quick apply
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Bioinformatics Scientist
$150K - $180K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$150K - $180K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Quick apply
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
NGS Pipeline Development & Data Science Build and maintain NGS analysis pipelines (e.g., Nextflow ... Design and implement novel bioinformatics algorithms for sequence analysis and synthetic biology ...
NGS Pipeline Development & Data Science Build and maintain NGS analysis pipelines (e.g., Nextflow ... Design and implement novel bioinformatics algorithms for sequence analysis and synthetic biology ...
Nextflow Bioinformatics information
See salary details
$67.2K is the 25th percentile. Wages below this are outliers.
$59.5K - $67.7K
27% of jobs
$67.7K - $75.9K
15% of jobs
$75.9K - $84K
6% of jobs
The median wage is $85.2K / yr.
$84K - $92.2K
15% of jobs
$92.2K - $100.4K
9% of jobs
$100.4K - $108.6K
2% of jobs
$114.7K is the 75th percentile. Wages above this are outliers.
$108.6K - $116.8K
2% of jobs
$116.8K - $125K
2% of jobs
$125K - $133.1K
10% of jobs
$133.1K - $141.3K
11% of jobs
$141.3K - $149.5K
2% of jobs
$59.5K
$94.5K
$149.5K
How much do nextflow bioinformatics jobs pay per year?
As of Aug 23, 2026, the average yearly pay for nextflow bioinformatics in the United States is $94,474.00, according to ZipRecruiter salary data. Most workers in this role earn between $67,500.00 and $129,500.00 per year, depending on experience, location, and employer.
What is a Nextflow bioinformatician?
A Nextflow Bioinformatician is a specialist who uses the Nextflow workflow management system to design, implement, and maintain computational pipelines for analyzing biological data. They typically work with large-scale sequencing datasets, automating processes such as data preprocessing, alignment, variant calling, and more. Their expertise lies in combining programming skills with bioinformatics knowledge to streamline and reproduce complex analyses, often in high-performance or cloud computing environments. This role is critical for ensuring reliable, scalable, and reproducible results in genomics and other life science research.
What skills and qualifications are needed to thrive as a Nextflow bioinformatics specialist?
To thrive as a Nextflow Bioinformatics specialist, you need a strong background in bioinformatics, scripting languages (such as Python or Bash), and experience with workflow management systems, often supported by a relevant degree in bioinformatics, biology, or computer science. Proficiency with Nextflow, containerization platforms (like Docker or Singularity), and high-performance computing environments is typically required. Problem-solving ability, strong attention to detail, and effective collaboration are critical soft skills in this role. These competencies are essential for developing reproducible, scalable analysis pipelines that drive accurate biological insights in research or clinical settings.
What are common challenges when developing and maintaining Nextflow pipelines in a bioinformatics team?
One common challenge in developing and maintaining Nextflow pipelines is ensuring reproducibility and compatibility across different computing environments, such as local clusters and cloud platforms. Collaborating with team members often involves integrating diverse tools and datasets, which can introduce version conflicts or software dependency issues. Additionally, keeping pipelines up-to-date with rapidly evolving bioinformatics methods requires strong communication and regular code reviews within the team. Effective documentation and modular pipeline design can help address these challenges and streamline collaborative workflows.
What is the difference between Nextflow Bioinformatics vs Bioinformatics Analyst?
| Aspect | Nextflow Bioinformatics | Bioinformatics Analyst |
|---|---|---|
| Credentials | Typically requires a degree in bioinformatics, computer science, or related fields; familiarity with scripting and workflow management tools | Usually holds a degree in bioinformatics, biology, or related disciplines; strong analytical and programming skills |
| Work Environment | Research labs, biotech companies, or academic institutions; focuses on developing and executing computational workflows | Data analysis in research or clinical settings; interprets biological data and reports findings |
| Industry Usage | Used in genomics, transcriptomics, and large-scale data processing projects | Applied in research, healthcare, and diagnostics to analyze biological datasets |
While both roles require bioinformatics knowledge, Nextflow Bioinformatics specializes in managing and automating computational workflows using tools like Nextflow, whereas Bioinformatics Analysts focus on analyzing biological data and interpreting results. The roles often overlap but differ in technical focus and responsibilities.
More about Nextflow Bioinformatics jobs
What cities are hiring for Nextflow Bioinformatics jobs?
Cities with the most Nextflow Bioinformatics job openings:
What states have the most Nextflow Bioinformatics jobs?
States with the most job openings for Nextflow Bioinformatics jobs include:
What job categories do people searching Nextflow Bioinformatics jobs look for?
The top searched job categories for Nextflow Bioinformatics jobs are:
Job description
Bioinformatics Scientist | South San Francisco, CA (Remote Flex)
I'm working on a retained search for a high-growth DNA sequencing company that's quietly become one of the most-used platforms in modern biotech — Nobel laureates, top-tier startups, and DIY biohackers all run their science through this platform daily.
They're building something genuinely different: a team that moves at software speed inside a biology world. If you've ever been frustrated by how slow biotech moves, this is for you.
The Role
This isn't a "maintain the pipeline" job. You'll be architecting production-grade bioinformatics workflows that process thousands of samples per day, developing novel algorithms that turn raw sequencing data into fast, intuitive insights, and translating that science directly into user-facing experiences. You'll also mentor teammates and help set the technical direction of the function.
What They're Looking For
- PhD in Bioinformatics, CS, Statistics, Physics or similar — with 3+ years building production pipelines
- Deep domain expertise in at least one of: microbial genomics (assembly/metagenomics), variant calling/large-scale genomics, or bulk/single-cell RNA-seq
- Production experience with Nextflow or Snakemake, including cloud deployments
- Strong Python (numpy, pandas, biopython, Jupyter) and solid Linux/Git fundamentals
- Bonus: a track record of publishing or developing novel bioinformatics algorithms
Why It's Worth a Conversation
✅ Mission-driven accelerating life-saving research globally
✅ Small, elite team real ownership and impact from day one
✅ Fast-moving culture that rewards intellectual curiosity
Contact Sam Shinner at Discover International to apply
About Discover International
Sourced by ZipRecruiter
In the ever changing and complex work environment Life Science Organisations face today, a flexible workforce is key to agility and performance. Working in partnership we review your requirements, challenges and goals, and design a tailored Discover Consulting solution that delivers the results you need. Discover Consulting provides a tailored, trusted, end-to-end consultancy service and the best independent contractors in the market.
Industry
Recruiting and staffing services
Company size
51 - 200 Employees
Headquarters location
Miami, FL, US