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Nextflow Bioinformatics Jobs in Illinois (NOW HIRING)

We are seeking a highly motivated and capable Bioinformatics Scientist to join our Liquid Biopsy ... tools (Nextflow, Snakemake) * Proven scientific reputation as demonstrated by scientific ...

Nextflow Bioinformatics information

What is a Nextflow bioinformatician?

A Nextflow Bioinformatician is a specialist who uses the Nextflow workflow management system to design, implement, and maintain computational pipelines for analyzing biological data. They typically work with large-scale sequencing datasets, automating processes such as data preprocessing, alignment, variant calling, and more. Their expertise lies in combining programming skills with bioinformatics knowledge to streamline and reproduce complex analyses, often in high-performance or cloud computing environments. This role is critical for ensuring reliable, scalable, and reproducible results in genomics and other life science research.

What skills and qualifications are needed to thrive as a Nextflow bioinformatics specialist?

To thrive as a Nextflow Bioinformatics specialist, you need a strong background in bioinformatics, scripting languages (such as Python or Bash), and experience with workflow management systems, often supported by a relevant degree in bioinformatics, biology, or computer science. Proficiency with Nextflow, containerization platforms (like Docker or Singularity), and high-performance computing environments is typically required. Problem-solving ability, strong attention to detail, and effective collaboration are critical soft skills in this role. These competencies are essential for developing reproducible, scalable analysis pipelines that drive accurate biological insights in research or clinical settings.

What are common challenges when developing and maintaining Nextflow pipelines in a bioinformatics team?

One common challenge in developing and maintaining Nextflow pipelines is ensuring reproducibility and compatibility across different computing environments, such as local clusters and cloud platforms. Collaborating with team members often involves integrating diverse tools and datasets, which can introduce version conflicts or software dependency issues. Additionally, keeping pipelines up-to-date with rapidly evolving bioinformatics methods requires strong communication and regular code reviews within the team. Effective documentation and modular pipeline design can help address these challenges and streamline collaborative workflows.

What is the difference between Nextflow Bioinformatics vs Bioinformatics Analyst?

AspectNextflow BioinformaticsBioinformatics Analyst
CredentialsTypically requires a degree in bioinformatics, computer science, or related fields; familiarity with scripting and workflow management toolsUsually holds a degree in bioinformatics, biology, or related disciplines; strong analytical and programming skills
Work EnvironmentResearch labs, biotech companies, or academic institutions; focuses on developing and executing computational workflowsData analysis in research or clinical settings; interprets biological data and reports findings
Industry UsageUsed in genomics, transcriptomics, and large-scale data processing projectsApplied in research, healthcare, and diagnostics to analyze biological datasets

While both roles require bioinformatics knowledge, Nextflow Bioinformatics specializes in managing and automating computational workflows using tools like Nextflow, whereas Bioinformatics Analysts focus on analyzing biological data and interpreting results. The roles often overlap but differ in technical focus and responsibilities.

What cities in Illinois are hiring for Nextflow Bioinformatics jobs?

Cities in Illinois with the most Nextflow Bioinformatics job openings:

Infographic showing various Nextflow Bioinformatics job openings in Illinois as of August 2026, with employment types broken down into 57% Full Time, 42% Part Time, and 1% Contract. Highlights an 41% Physical, 2% Hybrid, and 57% Remote job distribution.

Bioinformatics Scientist

Discover International

Mundelein, IL • On-site

Other

Posted 8 days ago


Job description

Bioinformatics Scientist | South San Francisco, CA (Remote Flex)


I'm working on a retained search for a high-growth DNA sequencing company that's quietly become one of the most-used platforms in modern biotech — Nobel laureates, top-tier startups, and DIY biohackers all run their science through this platform daily.


They're building something genuinely different: a team that moves at software speed inside a biology world. If you've ever been frustrated by how slow biotech moves, this is for you.


The Role

This isn't a "maintain the pipeline" job. You'll be architecting production-grade bioinformatics workflows that process thousands of samples per day, developing novel algorithms that turn raw sequencing data into fast, intuitive insights, and translating that science directly into user-facing experiences. You'll also mentor teammates and help set the technical direction of the function.


What They're Looking For

  • PhD in Bioinformatics, CS, Statistics, Physics or similar — with 3+ years building production pipelines
  • Deep domain expertise in at least one of: microbial genomics (assembly/metagenomics), variant calling/large-scale genomics, or bulk/single-cell RNA-seq
  • Production experience with Nextflow or Snakemake, including cloud deployments
  • Strong Python (numpy, pandas, biopython, Jupyter) and solid Linux/Git fundamentals
  • Bonus: a track record of publishing or developing novel bioinformatics algorithms


Why It's Worth a Conversation

✅ Mission-driven accelerating life-saving research globally

✅ Small, elite team real ownership and impact from day one

✅ Fast-moving culture that rewards intellectual curiosity


Contact Sam Shinner at Discover International to apply



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About Discover International

Sourced by ZipRecruiter

In the ever changing and complex work environment Life Science Organisations face today, a flexible workforce is key to agility and performance. Working in partnership we review your requirements, challenges and goals, and design a tailored Discover Consulting solution that delivers the results you need. Discover Consulting provides a tailored, trusted, end-to-end consultancy service and the best independent contractors in the market.

Industry

Recruiting and staffing services

Company size

51 - 200 Employees

Headquarters location

Miami, FL, US

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