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Clinical Systems Analyst Jobs in California (NOW HIRING)

The Southwest Healthcare team is seeking an on-site Full-Time Clinical Systems Analyst who is a registered RN in the State of California. This position will be onsite at our Palmdale Regional Medical ...

Systems Design Analyst II

Irvine, CA · On-site

$100 - $130/hr

Establishes and maintains methodology used by the team to design and develop clinical trial systems, benchmarking against industry standards. Ensures that systems are specified to optimize ...

Responsibilities: * Analyze, design, maintain, and implement various systems within the ... We deliver agile, scalable talent solutions across IT, engineering, life sciences, clinical, and ...

Analyze business and clinical requirements and translate them into application and system solutions ... Participate in application implementations, upgrades, enhancements, testing, optimization, and ...

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Clinical Systems Analyst information

See California salary details

$54.3K

$92.6K

$131.3K

How much do clinical systems analyst jobs pay per year?

As of Sep 5, 2026, the average yearly pay for clinical systems analyst in California is $92,591.00, according to ZipRecruiter salary data. Most workers in this role earn between $75,500.00 and $107,100.00 per year, depending on experience, location, and employer.

What is a clinical systems analyst?

A clinical systems analyst oversees the computer information systems at a hospital or other medical facility. As a clinical systems analyst, your job duties include the development of software applications to support hospital requirements, troubleshooting computer system issues, and testing changes to the facility's computer software. The qualifications to have a career as a clinical systems analyst include a bachelor’s degree in computer science and experience working in a medical setting.

What are the key skills and qualifications needed to thrive as a clinical systems analyst, and why are they important?

To thrive as a Clinical Systems Analyst, you need a solid background in healthcare IT, data analysis, and systems integration, often supported by a degree in health informatics or a related field. Familiarity with electronic health record (EHR) systems such as Epic or Cerner, as well as certifications like CPHIMS or experience with HL7 standards, is valuable. Strong problem-solving, communication, and project management skills help bridge the gap between clinical staff and IT teams. These skills ensure efficient implementation and optimization of clinical systems, ultimately improving patient care and organizational workflow.

How does a clinical systems analyst typically collaborate with healthcare providers to improve electronic health record (EHR) systems?

Clinical Systems Analysts work closely with physicians, nurses, and other healthcare staff to understand their workflow needs and address challenges with EHR systems. They gather user feedback, translate clinical requirements into technical specifications, and often participate in system customization, testing, and training sessions. Regular collaboration ensures that the EHR supports clinical processes efficiently, improves patient care, and complies with healthcare regulations. This role frequently involves cross-functional teamwork, including IT departments and clinical leadership, to drive continuous system improvements.

How much does a clinical systems analyst make?

The average salary for a clinical systems analyst is around $80,000 to $100,000 annually, depending on experience, certifications, and the healthcare setting. Salaries can vary based on location, with higher wages typically found in metropolitan areas and institutions requiring specialized knowledge of electronic health records (EHR) systems and healthcare IT tools.

What are popular job titles related to Clinical Systems Analyst jobs in California?

For Clinical Systems Analyst jobs in California, the most frequently searched job titles are:

What job categories do people searching Clinical Systems Analyst jobs in California look for?

The top searched job categories for Clinical Systems Analyst jobs in California are:

What cities in California are hiring for Clinical Systems Analyst jobs?

Cities in California with the most Clinical Systems Analyst job openings:

What are popular job titles related to Clinical Systems Analyst jobs in CA?

For Clinical Systems Analyst jobs in CA, the most frequently searched job titles are:

Infographic showing various Clinical Systems Analyst job openings in California as of August 2026, with employment types broken down into 1% As Needed, 84% Full Time, 11% Part Time, 3% Contract, and 1% Nights. Highlights an 89% Physical, 3% Hybrid, and 8% Remote job distribution, with an average salary of $92,591 per year, or $44.5 per hour.

Senior Epic Clinical Systems Analyst (Full Time, Day)

NorthBay Health

Fairfield, CA • On-site

$62.35 - $81.65/hr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 8 days ago


Key responsibilities

  • Support, configure, optimize, and maintain Epic clinical applications to ensure efficient clinical workflows.

  • Work closely with clinicians, IT services, and operational leaders to gather requirements, analyze needs, and design solutions within the Epic electronic health record system.

  • Provide guidance, mentorship, and oversight to junior Epic analysts and support build activities with Physician Builders.


NorthBay Health rating

7.5

Company rating: 7.5 out of 10

Based on 14 frontline employees who took The Breakroom Quiz


Job description


At NorthBay Health, the Sr. Epic Clinical Systems analyst is responsible for the support, configuration, optimization, and maintenance of Epic clinical applications to ensure efficient and effective clinical workflows, with a focus on safety, compliance, privacy and security, and adherence to best practices. This role works closely with clinicians, IT services, and operational leaders to gather requirements, analyze needs, design solutions, and support ongoing enhancements within the Epic electronic health record system. The analyst is a champion for change and standardization, promoting new features and functionality as they become available with a goal of reducing unnecessary manual efforts and supporting a friction-less experience for clinicians, medical staff, and patients. The Sr. Epic Clinical Systems Analyst will provide guidance, mentorship, and oversight to junior Epic analysts and may be assigned to partner with Physician Builders to support their build activities.
Qualifications
Education:
  • Bachelor's degree in Healthcare, Information Technology, or a related field or equivalent (8 years) in experience in healthcare IT field.

Licensure/Certification:
  • Current Epic certification in two or more clinical applications (e.g., EpicCare Inpatient, Ambulatory, Orders, ClinDoc, Stork, Optime, Radiant, Willow, Beacon) or advanced Epic certification is required and must be obtained within Twelve (12) months of hire if not already certified at the time of employment.
  • Clinical licensing or certification preferred such as RN, Pharmacy Tech, et al.

Experience:
  • Minimum 5 - 8 years' experience with Epic or other EHR administration.
  • Knowledge of related systems, understanding of HL7, interoperability concepts and healthcare IT concepts.

Skills:
  • Strong problem-solving skills with attention to detail and analytical thinking.
  • Ability to work independently and manage tasks in a fast-paced environment.
  • Requires excellent communication and collaboration skills.
  • Demonstrated leadership skills, including the ability to mentor team members, lead small projects or initiatives, coordinate cross-functional efforts, and promote collaboration within and across teams

Hours of Work:
  • Normally works eight-hour day.
  • Hours will vary according to work demands and project requirements; may require on-call support and occasional evening/weekend hours to support system upgrades or go-lives.

About Us
Interpersonal Skills and Values
Demonstrates NorthBay Health's True North Values: Nurture Care, Own It, Respect Relationships, Build Trust, and Hardwire Excellence. These values guide behavior, accountability, teamwork, and commitment to high-quality patient care.
Why NorthBay Health
NorthBay Health is an independent, nonprofit health system serving the Napa, Solano, and Yolo County regions. We are expanding access to care across our communities through two acute-care hospitals, including a Level II Trauma Center and a Level III NICU maternity unit, along with a cancer center, urgent care locations, and a growing network of primary and specialty care clinics.
We provide advanced services in cardiovascular care, neuroscience, orthopedics, surgery, and outpatient specialties. NorthBay Health is nationally recognized for quality care, including Magnet with Distinction designation for nursing and multiple U.S. News and World Report high performing recognitions.
We are committed to being the trusted healthcare partner of choice and offer an environment where employees can grow, contribute meaningfully, and support the health of our communities.
NorthBay Health Benefits Options
NorthBay Health offers a comprehensive benefits package based on established eligibility requirements. Benefits may include medical, dental, and vision insurance, life, disability, and long-term care coverage, paid time off including vacation, sick leave, holidays, and bereavement, a 403(b) retirement plan with employer match, education reimbursement for eligible roles, professional development and training programs, Employee Assistance Program, wellness programs, recognition programs, shift differentials, and market-based compensation review and increases subject to approval and organizational performance.
Compensation Structure
NorthBay Health uses a structured compensation framework. Staff-level positions use a step-based system (Steps 1-5) based on years of directly related experience, with Step 5 representing 20 or more years of experience in the role. Manager level and above positions are paid a fixed annual base salary and are eligible for a variable incentive compensation plan. Physician compensation is structured based on specialty and role requirements.
Remote Work Disclosure
NorthBay Health is primarily an onsite organization due to the nature of healthcare. Some roles may allow hybrid or remote work based on business needs.
Remote work is not supported in Washington, Ohio, Wyoming, North Dakota, Puerto Rico, the U.S. Virgin Islands, or outside of the United States.
Notice to Recruitment Agencies
NorthBay Health utilizes a managed service provider (MSP) for agency partnerships and is not currently engaging external recruiting firms outside of established agreements. We do not accept unsolicited resumes or third-party candidate submissions. Please do not contact NorthBay Health employees, leaders, physicians, or hiring managers regarding recruitment or job postings.
More Information
Visit NorthBay Health Careers for recruitment FAQs and additional information.

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