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Bioinformatics Programmer Jobs (NOW HIRING)

NYULMC

Sr. Bioinformatics Developer

New York, NY · On-site

NYU Langone Health seeks an experienced Bioinformatics Developer to design, develop, and implement end-to-end molecular testing data integration pipelines. This role will focus on harmonizing multi ...

RXinsider LTD.

$146 - $234/hr

Working at the intersection of bioinformatics, software engineering, validation, and operational support, you will monitor system performance, identify deviations from established standards, and ...

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Bioinformatics Programmer information

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$70.5K

$142.8K

$254K

How much do bioinformatics programmer jobs pay per year?

As of Sep 5, 2026, the average yearly pay for bioinformatics programmer in the United States is $142,829.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,500.00 and $175,000.00 per year, depending on experience, location, and employer.

What is a bioinformatics programmer?

A Bioinformatics Programmer is a professional who develops and maintains software tools to analyze biological data, such as DNA sequences, protein structures, and genomic variations. They work at the intersection of computer science and biology, using programming languages like Python, R, and Java to process and visualize complex biological datasets. Their role is crucial in fields like genomics, drug discovery, and biomedical research, where they help automate data analysis and support scientific investigations.

What does a bioinformatics programmer do?

A typical day for a Bioinformatics Programmer involves writing and optimizing code to analyze large datasets, commonly derived from genomics, proteomics, or clinical studies. You'll spend time collaborating with biologists, statisticians, and other programmers to design experiments, validate results, and interpret findings. Most roles also include maintaining data pipelines, troubleshooting software issues, and staying updated with the latest bioinformatics tools and research. The work environment often blends independent coding with regular team meetings and project updates, offering both technical and interdisciplinary challenges. This dynamic workflow makes the role both intellectually stimulating and impactful in advancing scientific discoveries.

What skills and qualifications are needed to be a bioinformatics programmer?

To thrive as a Bioinformatics Programmer, you need strong programming skills (often in Python, R, or Java), a solid background in biology or life sciences, and experience working with large-scale biological data. Commonly used tools and systems include bioinformatics software like BLAST, Bioconductor, cloud computing platforms, and version control systems such as Git, and certifications in relevant domains can be advantageous. Critical thinking, problem-solving, and effective communication are essential soft skills for integrating research findings and collaborating with interdisciplinary teams. These skills ensure you can develop robust, accurate computational solutions that drive advances in biological research and healthcare applications.

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Bioinformatics Programmer jobs near you
Infographic showing various Bioinformatics Programmer job openings in the United States as of August 2026, with employment types broken down into 90% Full Time, 2% Part Time, 7% Contract, and 1% Nights. Highlights an 90% Physical, 2% Hybrid, and 8% Remote job distribution, with an average salary of $142,829 per year, or $68.7 per hour.

Bioinformatics Engineer (Hybrid)

Quest Diagnostics

Baltimore, MD • On-site

$95K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Re-posted 23 days ago

ExamOne rating

6.6

Company rating: 6.6 out of 10

Based on 9 frontline employees who took The Breakroom Quiz

95th of 121 rated laboratories

Job description


Pay Range: $95,000.00 - $125,000.00 / year
Salary offers are based on a wide range of factors including relevant skills, training, experience, education, and, where applicable, certifications obtained. Market and organizational factors are also considered. Successful candidates may be eligible to receive annual performance bonus compensation.
Benefits Information:
We are proud to offer best-in-class benefits and programs to support employees and their families in living healthy, happy lives. Our pay and benefit plans have been designed to promote employee health in all respects - physical, financial, and developmental. Depending on whether it is a part-time or full-time position, some of the benefits offered may include:
• Day 1 Medical, supplemental health, dental & vision for FT employees who work 30+ hours
• Best-in-class well-being programs
• Annual, no-cost health assessment program Blueprint for Wellness®
• healthyMINDS mental health program
• Vacation and Health/Flex Time
• 6 Holidays plus 1 "MyDay" off
• FinFit financial coaching and services
• 401(k) pre-tax and/or Roth IRA with company match up to 5% after 12 months of service
• Employee stock purchase plan
• Life and disability insurance, plus buy-up option
• Flexible Spending Accounts
• Annual incentive plans
• Matching gifts program
• Education assistance through MyQuest for Education
• Career advancement opportunities
• and so much more!
About Haystack Oncology
Haystack Oncology, now part of Quest Diagnostics, is a next-generation liquid biopsy company focused on advancing tumor-informed minimal residual disease (MRD) testing. Our proprietary technology enables highly sensitive and specific detection of circulating tumor DNA (ctDNA), improving patient outcomes through earlier detection of residual disease.
As we continue to expand our assay portfolio and bring cutting-edge diagnostics to the public, we are seeking a skilled Bioinformatics Scientist to join our growing team. This role will play a critical part in supporting clinical production testing, clinical trials, and assay R&D for Quest Diagnostics laboratories in the US and Europe.
Role Overview
As a Bioinformatics Scientist, you will develop and maintain cloud-based computational infrastructure for the analysis of genomic data from our proprietary MRD assays. You will work cross-functionally with laboratory, LIMS, and IT teams to ensure seamless integration of bioinformatics workflows with clinical and research operations.
Responsibilities
  • Develop & maintain cloud infrastructure for scalable and efficient genomic data analysis.
  • Implement and optimize Python and Nextflow bioinformatics workflows.
  • Integrate bioinformatics pipelines with Laboratory Information Management Systems (LIMS) to streamline data processing.
  • Ensure compliance with IT security and privacy controls, aligning with Quest Diagnostics' corporate policies.
  • Apply software engineering best practices, contributing to the scalability, robustness, and maintainability of bioinformatics pipelines.
  • Develop and manage databases and applications for quality control (QC) and assay performance monitoring.
  • Document and validate bioinformatics systems in compliance with regulatory and quality standards for clinical diagnostics

Qualifications
Required:
  • Background in software or infrastructure engineering, with experience in bioinformatics.
  • Proficiency in bioinformatics pipeline workflow management, particularly Nextflow (preferred), Cromwell, or CWL.
  • Hands-on experience developing cloud-native infrastructure (AWS preferred) for storage, batch computing, and serverless applications.
  • Expertise in infrastructure as code (IaC) technologies such as Terraform or AWS CDK.
  • Strong programming skills in Python, JavaScript/TypeScript, R, or other relevant scripting languages.
  • Experience with API development and integration, particularly JSON-based RESTful APIs.
  • Deep understanding of version control (Git), CI/CD best practices, and software development lifecycle (SDLC).
  • Ability to work cross-functionally in a multi-disciplinary environment with minimal supervision.
  • Strong problem-solving, analytical, and troubleshooting skills, with the ability to diagnose and resolve technical issues.
  • Excellent verbal and written communication skills in English, with the ability to translate technical concepts for non-technical stakeholders.

Preferred:
  • Experience in a clinical diagnostics or regulated environment (e.g., CLIA, CAP, IVDR, FDA) with knowledge of software validation and regulatory requirements.
  • Understanding of controlled processes, environment management, and quality control systems in a clinical setting.
  • Familiarity with DevOps methodologies.

Education:
  • Bachelor's Degree (Required)
  • Master's Degree (Preferred

About the Team
Quest Diagnostics honors our service members and encourages veterans to apply.
While we appreciate and value our staffing partners, we do not accept unsolicited resumes from agencies. Quest will not be responsible for paying agency fees for any individual as to whom an agency has sent an unsolicited resume.
Equal Opportunity Employer: Race/Color/Sex/Sexual Orientation/Gender Identity/Religion/National Origin/Disability/Vets or any other legally protected status.

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