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Bioinformatics Developer Jobs (NOW HIRING)

MyOme

Bioinformatics Software Engineer

San Francisco, CA

$130K - $160K/yr

As a Bioinformatics Software Engineer, you will build scalable, cloud-based pipelines that power genomic and clinical data analysis in a real-world healthcare setting. You will combine strong ...

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How much do bioinformatics developer jobs pay per hour?

As of Jul 5, 2026, the average hourly pay for bioinformatics developer in the United States is $42.79, according to ZipRecruiter salary data. Most workers in this role earn between $42.55 and $43.03 per hour, depending on experience, location, and employer.

What are some common challenges faced by Bioinformatics Developers when integrating new data sources into existing pipelines?

Bioinformatics Developers often encounter challenges when integrating new data sources, such as ensuring compatibility with existing pipeline formats, managing diverse data types, and maintaining data quality and integrity. Adapting to rapidly evolving data standards and accommodating large-scale datasets can also be complex, requiring frequent updates and optimization of scripts or software. Collaboration with biologists and data scientists is essential to accurately interpret data requirements and troubleshoot issues, making communication skills and adaptability key in this role.

What is a Bioinformatics Developer?

A Bioinformatics Developer is a professional who combines expertise in biology, computer science, and mathematics to develop software tools and algorithms for analyzing biological data. They often work with genomic, proteomic, or other molecular data to help researchers interpret complex biological information. These developers play a key role in advancing research in areas such as genomics, drug discovery, and personalized medicine by creating efficient computational solutions to process and visualize large datasets.

What are the key skills and qualifications needed to thrive as a Bioinformatics Developer, and why are they important?

To thrive as a Bioinformatics Developer, you need a strong background in biology, computer science, and mathematics, often supported by a degree in bioinformatics, computer science, or a related field. Proficiency with programming languages (such as Python, R, or Java), bioinformatics tools (like BLAST, GATK), and experience with databases and cloud computing platforms are typically required. Strong analytical thinking, problem-solving abilities, and effective communication skills help translate complex biological data into actionable insights. These skills and qualities are essential for developing robust computational solutions that advance research and innovation in life sciences.
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Bioinformatics Developer jobs near you

Bioinformatics Software Engineer

AccuScan Sciences

San Jose, CA • On-site

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted yesterday

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Job description

As a Bioinformatics Software Engineer at AccuScan Sciences, you will develop, optimize, and maintain bioinformatics pipelines utilizing AWS infrastructure and Nextflow workflow management systems. Your contributions will directly impact innovative scientific discoveries and product development. You'll collaborate closely with scientists, engineers, and researchers, contributing your technical expertise to streamline processes, maintain automation, and drive our bioinformatics capabilities forward.

Responsibilities:

  • Design, implement, and develop tests and documentation for established robust bioinformatics pipelines.
  • Optimize computational workflows for high-performance execution and reproducible data analysis.
  • Maintain, monitor, and improve pipeline automation to ensure smooth operational workflows.
  • Manage GitHub repositories, oversee version control, and streamline the software release process.
  • Develop and manage infrastructure on AWS to ensure scalability, reliability, and efficiency.
  • Collaborate with cross-functional teams to integrate bioinformatics solutions.
  • Proactively identify opportunities to enhance infrastructure efficiency and security.

Requirements

Qualifications:

    • Bachelor’s degree or higher in Bioinformatics, Computational Biology, Computer Science, or a related field. with at least 3+ years of working experience out of college.
    • Experience with bioinformatics workflow development and optimization, particularly using Nextflow.
    • Experience developing software following best practices, including comprehensive testing and clear documentation.
    • Proficiency in scripting languages (Python, Bash) and familiarity with container technologies (Docker, Kubernetes).
    • Hands-on experience with AWS cloud computing services (EC2, S3, Batch, Lambda).
    • Excellent communication and collaborative skills.

Preferred Qualifications:

  • Familiarity with CI/CD practices.
  • Experience with infrastructure-as-code (Terraform, CloudFormation).

Benefits

  • Health Care Plan (Medical, Dental & Vision)
  • Retirement Plan (401k, IRA)
  • Paid Time Off (Vacation, Sick & Public Holidays)