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Upstream Process Development Jobs (NOW HIRING)

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Upstream Process Development information

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How much do upstream process development jobs pay per hour?

As of Jun 20, 2026, the average hourly pay for upstream process development in the United States is $26.51, according to ZipRecruiter salary data. Most workers in this role earn between $23.56 and $27.88 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive in Upstream Process Development, and why are they important?

Success in Upstream Process Development requires a strong background in biology, biochemistry, or chemical engineering, often with an advanced degree and experience in cell culture or fermentation techniques. Familiarity with bioreactors, process control systems, and analytical instrumentation, as well as knowledge of cGMP regulations, is essential. Critical thinking, problem-solving, and effective communication are important soft skills for optimizing processes and collaborating across multidisciplinary teams. These competencies ensure efficient development of scalable production processes, maintaining product quality and regulatory compliance.

What is the difference between Upstream Process Development vs Downstream Process Development?

AspectUpstream Process DevelopmentDownstream Process Development
FocusDevelopment of cell culture, fermentation, and bioreactor processesPurification, filtration, and formulation of bioproducts
Skills & CredentialsBioprocess engineering, molecular biology, biochemistryBioprocessing, chromatography, analytical chemistry
Work EnvironmentLaboratories, bioreactors, pilot plantsPurification facilities, labs, quality control
Industry UsageBiotech, pharmaceutical manufacturingBiotech, pharmaceutical manufacturing

Upstream Process Development focuses on creating and optimizing cell culture and fermentation processes to produce bioproducts. In contrast, Downstream Process Development involves purifying and finishing these products. Both roles are essential in biopharmaceutical manufacturing and require similar scientific backgrounds, but they specialize in different stages of bioprocessing.

What is upstream process development?

Upstream process development refers to the optimization and scaling of biological production processes that occur before product harvesting. This primarily involves the cultivation of cells or microorganisms to produce a desired product, such as a protein or antibody, in bioreactors. Scientists in this field work on improving cell lines, culture media, and fermentation conditions to maximize yield and quality. Upstream process development is a critical early phase in biomanufacturing, laying the foundation for downstream processing and overall production efficiency.

What are some common challenges faced in upstream process development and how do teams typically address them?

One of the main challenges in upstream process development is optimizing cell culture conditions to consistently achieve high yields and product quality. Teams often encounter variability in biological systems and must troubleshoot issues such as contamination, scale-up inconsistencies, or nutrient limitations. Collaboration with analytical, downstream, and quality teams is essential to identify root causes and implement solutions. Regular data review meetings, cross-functional problem-solving, and continuous process improvement are standard practices to ensure robust upstream processes.
More about Upstream Process Development jobs
What cities are hiring for Upstream Process Development jobs? Cities with the most Upstream Process Development job openings:
What states have the most Upstream Process Development jobs? States with the most job openings for Upstream Process Development jobs include:
Infographic showing various Upstream Process Development job openings in the United States as of June 2026, with employment types broken down into 7% As Needed, and 93% Part Time. Highlights an 94% Physical, 2% Hybrid, and 4% Remote job distribution, with an average salary of $55,150 per year, or $26.5 per hour.
Senior Associate Scientist (Contract), Upstream Polysaccharide Process Development

Senior Associate Scientist (Contract), Upstream Polysaccharide Process Development

Vaxcyte

San Carlos, CA โ€ข On-site

$56 - $62/hr

Other

Posted 4 days ago


Job description

Summary:

The Development organization is comprised of four Process teams: Protein, Polysaccharide, Conjugate Drug Substance (Conjugation), and Drug Product. These Process Development teams are supported by Analytical Development and Formulation Development teams. Vaxcyte is looking for a Senior Associate Scientist (contract) with experience in microbial fermentation and upstream processing to join the Upstream Polysaccharide Process Development team. The candidate will be responsible for collaboration on experimental design and execution of experiments to further develop and optimize upstream processes for polysaccharide manufacturing using microorganisms. The successful candidate will have practical laboratory experience related to microbial fermentation processes and eager to utilize and learn new laboratory skills. The role will require >50% time in the lab and this person will be able to independently detail experimental procedures/results in written and presentation formats. The successful candidate may interface closely with the cross-functional team, write detailed technical reports, present experimental results internally, and may potentially interface with external CMO partners.

Essential Functions:
  • Support in study design, execute, and analyze experiments for upstream polysaccharide for bacterial fermentation (BSL2) and vaccine production processes.
  • Execute experiments to develop the upstream process parameters (e.g., media, feed, pH, temperature, dissolved oxygen, agitation, etc.) and to enhance product yield, quality, and consistency.
  • Perform microbiology related work including plating, colony selection, Gram staining and cell enumeration on microscope.
  • Perform fermentation vessel assembly and script writing for process automation and execute fermentation experiment in shake-flask and lab scale bioreactors.
  • Prepare media and buffer as needed for experiments.
  • Operate and maintain instrumentation for bacterial fermentation and primary recovery (centrifugation, filtration, etc.) of bacterial polysaccharides utilizing aseptic techniques.
  • Support analytical method execution including optical density, residual metabolites and polysaccharide concentration and other relevant analytical techniques.
  • Assist in executing process development studies.
  • Keep accurate and current records of research and/or project related activities in laboratory notebooks and Electronic Lab Notebook.
  • Prepare and review protocol, technical reports, SOPs, and batch records.
  • Present and communicate scientific data and results to internal stakeholders.
  • Be an outstanding teammate and collaborate effectively with cross functional team members.
  • and collaborate effectively with downstream, analytical, and manufacturing teams within Polysaccharide Development and Manufacturing team to ensure seamless technology transfer and process integration.
Requirements:ย 
  • MSc in Chemical/Biochemical Engineering, Biotechnology, or similar degree with a minimum of 3 years of relevant industry experience, or BSc with a minimum of 5 years of relevant industry experience.
  • Experience in handling microorganisms with proper aseptic techniques to perform upstream processing related work in flasks/bioreactors.
  • Hands-on experience and theoretical understanding of key processing operations such as microbial culture, fermentation process, microbial media, and process optimization and relevant analytical technologies; experience with depth filtration, continuous centrifugation is a plus.
  • Develop and optimize scripts for instrumentation, including Ambr systems, to enhance efficiency and automate processes, leveraging programming languages such as Python or R is a plus.
  • Experience with Design of Experiments (DoE) principles and DoE software.
  • Process characterization experience is a plus.
  • Cell banking expertise, colony selection and genetic analysis of recombinant strains is a plus.
  • Proficiency with computer programs such as Microsoft Excel, Word, PowerPoint, Visio and JMP.
  • Working knowledge of GMP requirements.
  • Proven ability to succeed in a cross-functional team environment, effectively managing multiple projects and contributing to team outcomes.
  • Strong interpersonal skills, with excellent written and verbal communication abilities.
Reports to: Senior Scientist, Upstream Polysaccharide Process Development
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Location: San Carlos, CA
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Expected Contract Length:
12months
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Hourly Range: $56.00/hr. - $62.00/hr.
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About Vaxcyte

Sourced by ZipRecruiter

Industry

Biotechnology research and development

Company size

51 - 200 Employees

Headquarters location

San Carlos, CA, US

Year founded

2013