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Nonprofit Controller Jobs (NOW HIRING)

CFS

Controller

Washington, DC · Hybrid

$140K - $160K/yr

This is an excellent opportunity for a nonprofit Controller who enjoys both strategic and hands on work and wants to contribute to an organization focused on strengthening democracy, international ...

CFS

Controller (Non-Profit)

Indianapolis, IN · Hybrid

$95K - $120K/yr

Controller (Non‑Profit) Indianapolis, IN Hybrid schedule (up to 2 days work from home) $95,000 - $120,000 base salary (flexible based on experience and nonprofit complexity) A mission‑driven ...

Turn2Partners

Controller - Nonprofit

Washington, DC · On-site

$140K/yr

Controller About the Organization Our client is a growing national 501(c)(6) organization with ... S. GAAP, nonprofit accounting standards, grant requirements, and Single Audit requirements.

Siino & Associates LLC

Be Seen First

Controller - Nonprofit

Walnut Creek, CA · On-site

$120K - $148K/yr

Our client, a nonprofit organization located in Walnut Creek, CA, is looking for a Controller to be responsible to plan, manage and control the activities of the Organization. The position reports to ...

Siino & Associates LLC

Be Seen First

Controller - Nonprofit

Walnut Creek, CA · On-site

$120K - $148K/yr

Our client, a nonprofit organization located in Walnut Creek, CA, is looking for a Controller to be responsible to plan, manage and control the activities of the Organization. The position reports to ...

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Nonprofit Controller information

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$55K

$119.5K

$175.5K

How much do nonprofit controller jobs pay per year?

As of Aug 23, 2026, the average yearly pay for nonprofit controller in the United States is $119,497.00, according to ZipRecruiter salary data. Most workers in this role earn between $97,000.00 and $138,500.00 per year, depending on experience, location, and employer.

What is a nonprofit controller?

A Nonprofit Controller is a senior financial professional responsible for managing the accounting, financial reporting, budgeting, and compliance functions within a nonprofit organization. They ensure that all financial practices adhere to regulatory standards and support the organization’s mission. Nonprofit Controllers oversee the preparation of financial statements, manage audits, and often supervise accounting staff. Their work helps maintain transparency and accountability in the organization’s use of funds.

What does a nonprofit controller do?

A nonprofit controller manages accounting operations for a charitable organization. In this career, you oversee the collection of data and information for use in financial statement reports. You supervise budget planning. You coordinate both internal and external audit processes and make operational adjustments based on the results of those audits. As a controller, you have hiring and training responsibilities in addition to your operational management duties. You select new employees and make sure they receive proper training, and you ensure that your employees account for all necessary information that you use for reporting and financial summaries for donors and regulatory authorities.

What are the key skills and qualifications needed to thrive as a nonprofit controller, and why are they important?

To thrive as a Nonprofit Controller, you need strong expertise in nonprofit accounting, financial analysis, and compliance, usually supported by a bachelor’s degree in accounting or finance and often a CPA certification. Familiarity with fund accounting software such as QuickBooks Nonprofit, Sage Intacct, or Blackbaud Financial Edge is typically required. Exceptional attention to detail, integrity, and strong communication skills help build trust and facilitate collaboration across departments. These skills are crucial for maintaining financial transparency, ensuring regulatory compliance, and supporting the organization's mission-driven goals.

How does a nonprofit controller typically collaborate with program managers and development teams?

As a Nonprofit Controller, you will regularly work with program managers and development teams to ensure proper allocation of funds and compliance with grant requirements. This collaboration often involves budget planning, financial reporting, and providing guidance on allowable expenses. Open communication is key, as you'll help translate financial data into actionable insights that support program objectives and fundraising efforts. Building strong relationships with these teams is essential for accurate financial tracking and organizational success.

What is the difference between Nonprofit Controller vs Nonprofit Accountant?

AspectNonprofit ControllerNonprofit Accountant
CredentialsCPA or equivalent, financial management experienceAccounting degree or certification, entry to mid-level experience
Work EnvironmentOversees financial operations, manages staff, strategic planningHandles day-to-day bookkeeping, reconciliations, and reporting
Employer & Industry UsageNonprofit organizations, foundations, charitiesNonprofits, small organizations, community groups
Search & Comparison IntentHigher-level financial management rolesEntry to mid-level accounting roles

The Nonprofit Controller typically holds a CPA and manages the organization's financial strategy, staff, and compliance. In contrast, a Nonprofit Accountant focuses on routine bookkeeping and financial reporting. While both roles require accounting skills, the Controller's position is more strategic and supervisory, making it suitable for those with more experience and credentials.

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What cities are hiring for Nonprofit Controller jobs?

Cities with the most Nonprofit Controller job openings:

What are the most commonly searched types of Nonprofit Controller jobs?

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What states have the most Nonprofit Controller jobs?

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Nonprofit Controller jobs near you
Infographic showing various Nonprofit Controller job openings in the United States as of August 2026, with employment types broken down into 1% Internship, 3% As Needed, 75% Full Time, 20% Part Time, and 1% Contract. Highlights an 92% Physical, 3% Hybrid, and 5% Remote job distribution, with an average salary of $119,497 per year, or $57.5 per hour.

Controller - CAAS - Nonprofit

Cliftonlarsonallen

Milwaukee, WI • On-site

Full-time

Medical, Dental, Vision, Retirement

Re-posted 18 days ago

CliftonLarsonAllen rating

7.0

Company rating: 7.0 out of 10

Based on 29 frontline employees who took The Breakroom Quiz

21st of 23 rated bookkeepers and accountants

Job description

We recognize that not everyone wants to grow their career paths in the same way. That's why CLA exists to create opportunities. With 8500 employees and over 130 offices nationwide, We promise to know you and help you!

At CLA, Nonprofits are a priority. As the largest industry group in the firm, we have over 850 professionals dedicated to serving our 11,000+ nonprofit clients. We are looking to hire a Nonprofit Controller for our Client Accounting and Advisory Service (CAAS). CAAS helps our clients transform their business with a collaborative approach that allows them to seamlessly mitigate risk, overcome challenges, meet deadlines, and identify personnel to help them with their workforce needs.


Job Description:

  • Develop internal control policies, guidelines, and procedures for activities such as budget administration, cash and credit management, and accounting.

  • Coordinate and directs the financial planning, budgeting, procurements, or investment activities for all or part of an organization. Prepare financial information.

  • Prepare and/or direct preparation of financial statements, business activity reports, financial position forecasts, budgets, or reports required by regulatory agencies.

  • Evaluate needs for procurement of funds and investment of surpluses and make appropriate recommendations.

  • Monitor ratio and key performance indicators (KPI).

  • Monitor and evaluates the performance of accounting and other financial staff, recommending and implementing actions.

  • Advise management on short-term and long-term financial objectives, policies, and actions.

  • Communicate on a regular basis with boards, bankers, investors, constituents, etc.; may include prepping for and/or hosting board presentations.

Education/Experience:

  • Education: Bachelor's degree is required. Combination of related experience, education, and training may be accepted in lieu of degree. CPA certification is preferred but not required.

  • Experience: 6 years of relevant accounting and/or financial experience is required (Nonprofit industry and back-office accounting experience is highly preferred). Public accounting experience preferred but not required.

  • Aptitude for developing and maintaining a thorough working knowledge of accounting software and systems. QuickBooks experience is preferred.

  • Proficiency with applicable software (Microsoft Excel, Word, Outlook, etc).

  • Travel: This position requires frequent local travel to/from client sites and may require occasional non-local or overnight travel for client visits, training, meetings and/or other business-related purposes.

Skills/Knowledge:

  • An understanding of generally accepted accounting principles (FASB/SFAS) or other comprehensive basis of accounting

  • Strong organization skills/goal orientation/self-motivation.

  • Ability to handle pressure in a positive professional manner.

  • Excellent interpersonal skills.

  • Communication that is clear, concise, and considerate of the needs of others.

  • Ability to work cooperatively with others and value the different contributions people make.

  • Proven success in managing work and key client relationships to exceed client expectations.

#LI-MK1


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Wellness at CLA

To support our CLA family members, we focus on their physical, financial, social, and emotional well-being and offer comprehensive benefit options that include health, dental, vision, 401k and much more.


To view a complete list of benefits, click here.


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About CliftonLarsonAllen

Sourced by ZipRecruiter

CliftonLarsonAllen (CLA) is a leading professional services company based in Minneapolis, MN, US. CLA operates in the accounting industry and offers a broad range of products and services such as wealth advisory, outsourcing, audit, tax, and consulting services. The company was founded in 1953 with a merger between two firms, Clifton Gunderson and LarsonAllen, in 2012. Working in accordance with their mission to create opportunities for clients, people, and communities, they have established a presence across the US, serving privately held businesses, non-profits, and governmental entities. Recognized for their contributions, CLA has received accolades such as the Innovative Firm of the Year award.

Industry

Accounting services

Company size

5,001 - 10,000 Employees

Headquarters location

Minneapolis, MN, US

Year founded

2012

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