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Manager Nonprofit Controller Jobs (NOW HIRING)

GHJ

Controller - Nonprofit Organization

Los Angeles, CA · On-site

$150K - $177K/yr

The Controller manages day-to-day accounting functions and helps ensure compliance with nonprofit accounting standards, grant requirements, and applicable laws and regulations. Responsibilities ...

PACE

Controller for Nonprofit

Los Angeles, CA

$170K - $200K/yr

The Controller will lead the finance team, work closely with department heads, and play a critical ... Manage the month-end and year-end close processes. * Prepare and present timely and accurate ...

PACE

Controller for Nonprofit

Los Angeles, CA · On-site

$170K - $200K/yr

The Controller will lead the finance team, work closely with department heads, and play a critical ... Manage the month-end and year-end close processes. * Prepare and present timely and accurate ...

Bay Area Community Resources

Controller

Novato, CA · On-site

$145K - $160K/yr

Controller Location: San Francisco Bay Area (Hybrid. Remote work with required attendance at ... Experience managing nonprofit audits, and Form 990 filings. * Proven ability to lead process ...

Bay Area Community Resources

Controller

El Cerrito, CA · On-site

$145K - $160K/yr

Controller Location: San Francisco Bay Area (Hybrid. Remote work with required attendance at ... Experience managing nonprofit audits, and Form 990 filings. * Proven ability to lead process ...

Bay Area Community Resources

Controller

Antioch, CA · On-site

$145K - $160K/yr

Controller Location: San Francisco Bay Area (Hybrid. Remote work with required attendance at ... Experience managing nonprofit audits, and Form 990 filings. * Proven ability to lead process ...

Bay Area Community Resources

Controller

El Cerrito, CA · On-site

$145K - $160K/yr

Controller Location: San Francisco Bay Area (Hybrid. Remote work with required attendance at ... Experience managing nonprofit audits, and Form 990 filings. * Proven ability to lead process ...

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How much do manager nonprofit controller jobs pay per year?

As of May 30, 2026, the average yearly pay for manager nonprofit controller in the United States is $55,952.00, according to ZipRecruiter salary data. Most workers in this role earn between $38,000.00 and $60,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Manager Nonprofit Controller, and why are they important?

To thrive as a Manager Nonprofit Controller, you need expertise in nonprofit accounting, financial reporting, and budgeting, generally supported by a bachelor’s degree in accounting or finance and relevant experience. Familiarity with accounting software such as QuickBooks Nonprofit, Blackbaud, or Sage Intacct, and often a CPA certification, is highly valued. Strong leadership, attention to detail, and effective communication skills set top candidates apart in this role. These skills ensure accurate financial oversight, compliance with nonprofit regulations, and sound decision-making to support the organization’s mission.

How does a Manager Nonprofit Controller typically collaborate with program and development teams within an organization?

A Manager Nonprofit Controller works closely with program and development teams to ensure that financial planning, budgeting, and reporting align with the organization's mission and fundraising goals. They provide financial insights to help evaluate program effectiveness and support grant compliance by tracking restricted funds and reporting requirements. Regular meetings and open communication are common, fostering a collaborative environment where financial and programmatic objectives are synchronized for optimal impact.

What is a Manager Nonprofit Controller?

A Manager Nonprofit Controller is a financial leader responsible for overseeing the accounting and financial reporting functions of a nonprofit organization. They ensure compliance with accounting standards and regulatory requirements specific to nonprofits, manage budgets, prepare financial statements, and may oversee audits. Additionally, they work closely with executive leadership to inform financial strategy, monitor grant funding, and support the organization's mission through sound fiscal management.

What is the difference between Manager Nonprofit Controller vs Bookkeeper?

AspectManager Nonprofit ControllerBookkeeper
CredentialsAccounting degree, CPA preferredHigh school diploma or equivalent
ResponsibilitiesFinancial oversight, budgeting, financial reportingRecording transactions, maintaining ledgers
Work EnvironmentNonprofit organizations, finance departmentsAccounting firms, small nonprofits
Industry UsageCommon in nonprofit sectorWidespread across industries

The Manager Nonprofit Controller oversees financial management, budgeting, and reporting within nonprofit organizations, requiring advanced accounting skills and certifications. In contrast, a Bookkeeper handles day-to-day transaction recording with less emphasis on strategic financial planning. The Controller role is more senior and analytical, while Bookkeeping is more operational and clerical.

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Manager Nonprofit Controller jobs near you

Controller - Nonprofit Organization

GHJ

Los Angeles, CA • On-site

$150K - $177K/yr

Full-time

Posted 24 days ago

Job description

GHJ Search and Staffing serves as the recruitment division of GHJ, a prominent national accounting and advisory firm. Our team provides qualified Accounting and Finance professionals on a temporary and permanent basis across a broad range of industries. GHJ's relationship with our Global Advisory and Accounting Network provides the resources needed to better understand client's needs, attract a higher caliber of candidates and assess candidate potential.
We are seeking a mission-driven Controller to oversee the financial & accounting operations of a highly-respected nonprofit organization in Los Angeles.
The Controller is responsible for overseeing the financial operations of the nonprofit organization, including accounting, financial reporting, budgeting, compliance, internal controls, and audit coordination. This role ensures the accuracy and integrity of financial records while supporting the organization's mission through sound financial management and strategic guidance.
The Controller manages day-to-day accounting functions and helps ensure compliance with nonprofit accounting standards, grant requirements, and applicable laws and regulations.
Responsibilities
Financial Management & Accounting
  • Oversee all accounting operations, including general ledger, accounts payable, accounts receivable, payroll, and cash management.
  • Prepare timely and accurate monthly, quarterly, and annual financial statements.
  • Maintain the integrity of the organization's financial records and accounting systems.
  • Ensure compliance with Generally Accepted Accounting Principles (GAAP) and nonprofit accounting standards.
  • Monitor and reconcile bank accounts and investment activity.
Budgeting & Financial Planning
  • Assist with the development and management of the annual operating budget.
  • Provide budget-to-actual variance analysis and financial forecasting.
  • Support leadership with financial analysis and recommendations.
  • Collaborate with department leaders to monitor program and grant budgets.
Grants & Compliance
  • Track and report restricted and unrestricted funding.
  • Ensure compliance with grant agreements, donor restrictions, and funding requirements.
  • Prepare financial reports for funders, agencies, and board committees as needed.
  • Support compliance with federal, state, and local regulations.
Audit & Internal Controls
  • Coordinate annual financial audits and tax filings, including Form 990 preparation support.
  • Develop and maintain effective internal controls and financial policies.
  • Ensure compliance with organizational policies and procedures.
  • Recommend process improvements to enhance efficiency and accuracy.
Leadership & Administration
  • Supervise and mentor accounting and finance staff, as applicable.
  • Serve as a financial resource to leadership and program managers.
  • Participate in strategic planning and organizational initiatives.
  • Support board and finance committee reporting requirements.

Qualifications
  • 7+ years of accounting or finance experience
  • Bachelor's degree in Accounting or related field

$150,000 - $177,000 a year
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