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Manager Clinical Systems Jobs in Indiana (NOW HIRING)

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Manager Clinical Systems information

See Indiana salary details

$43.8K

$97.1K

$145.6K

How much do manager clinical systems jobs pay per year?

As of Sep 7, 2026, the average yearly pay for manager clinical systems in Indiana is $97,123.00, according to ZipRecruiter salary data. Most workers in this role earn between $73,300.00 and $118,900.00 per year, depending on experience, location, and employer.

What does a manager clinical systems do?

A Manager Clinical Systems oversees the implementation, maintenance, and optimization of clinical information systems within a healthcare organization. They ensure that electronic health records and other clinical technologies support efficient, accurate, and secure patient care. This role involves collaborating with IT teams, clinicians, and administrators to align system functionality with clinical workflows. Managers also lead projects, manage staff, and ensure systems comply with healthcare regulations such as HIPAA.

What are the key skills and qualifications needed to thrive as a manager clinical systems?

To thrive as a Manager Clinical Systems, you need expertise in healthcare informatics, project management, and clinical workflow analysis, typically supported by a relevant degree and experience in a clinical or IT environment. Familiarity with electronic health records (EHR) platforms, HL7 standards, and certifications like PMP or Certified Professional in Healthcare Information and Management Systems (CPHIMS) are often required. Strong leadership, communication, and problem-solving skills are crucial for effectively guiding teams and liaising between clinical and technical stakeholders. These abilities ensure the successful implementation and optimization of clinical systems, leading to improved patient outcomes and operational efficiency.

What are the common challenges faced by a manager clinical systems when implementing new healthcare technology solutions?

A Manager Clinical Systems often encounters challenges such as ensuring seamless integration of new technology with existing electronic health records (EHRs), managing change resistance among clinical staff, and maintaining compliance with healthcare regulations. Balancing the differing needs of IT and clinical teams while keeping patient safety and data security as top priorities can also be complex. Effective communication, stakeholder engagement, and thorough user training are key strategies for overcoming these obstacles and ensuring successful technology adoption.

What is the difference between Manager Clinical Systems vs Clinical Systems Coordinator?

AspectManager Clinical SystemsClinical Systems Coordinator
CredentialsBachelor's degree in healthcare, IT, or related field; certifications in clinical systems or project managementAssociate's or Bachelor's degree; familiarity with clinical systems and healthcare workflows
Work EnvironmentOversees clinical IT teams, collaborates with healthcare providers, manages system implementationsSupports clinical system operations, assists in training, troubleshoots user issues
Employer & Industry UsageHospitals, healthcare systems, clinicsHospitals, clinics, healthcare organizations
Search & Comparison IntentHigh overlap in responsibilities and credentials, often compared for career progressionRelated role focusing on support and coordination

The main difference is that the Manager Clinical Systems oversees the entire clinical systems team and manages implementations, while the Clinical Systems Coordinator provides support, training, and troubleshooting assistance within the clinical IT environment.

What cities in Indiana are hiring for Manager Clinical Systems jobs?

Cities in Indiana with the most Manager Clinical Systems job openings:

Infographic showing various Manager Clinical Systems job openings in Indiana as of August 2026, with employment types broken down into 85% Full Time, 13% Part Time, and 2% Contract. Highlights an 83% Physical, 2% Hybrid, and 15% Remote job distribution, with an average salary of $97,123 per year, or $46.7 per hour.

Clinical Employee Rotational Program, Undergraduate

100 Eli Lilly and Company

Indianapolis, IN โ€ข On-site

$70 - $92/hr

Other

Medical, Dental, Vision, Life, Retirement, PTO

Posted 5 days ago


Job description

At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless workโ€”but itโ€™s work worth doing. If youโ€™re driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us.

At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless workโ€”but itโ€™s work worth doing. If youโ€™re driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us.

Organization Overview

At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless workโ€”but itโ€™s work worth doing. If youโ€™re driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us.

Functional Overview (CERP Overview)

Lilly provides a unique opportunity to work in the drug development areas of a world-class pharmaceutical company. We are looking for students majoring in life sciences disciplines, pharmaceutical sciences or a related discipline to join our team. With Lilly you will have an opportunity to diversify your skillset while contributing to cutting edge research.

  • Clinical Trial Planning and Design
  • Clinical Trial Investigator Selection and Oversight
  • Patient Recruitment and Enrollment
  • Clinical Diagnostic and Laboratory Science
  • Clinical Statistics, Data Analysis & Data Management
  • Clinical Systems Management
  • Medical Writing, Communication and Documentation
  • Clinical Supply and Delivery
  • Clinical Trial Budgeting and Financial Management
  • Clinical Research Training and Education

As part of Lilly's commitment to innovation, Full-time equivalent employees will have the opportunity to build fluency with AI tools used across the business. We expect Full-time equivalent employees to approach these tools with curiosity, apply critical thinking to AI-assisted work, and always prioritize accuracy, confidentiality, and ethical standards in how they use them.

Basic Qualifications

Enrolled in an undergraduate program Qualified applicants must be authorized to work in the United States on a full-time basis. Lilly will not provide support for or sponsor work authorization or visas for this role, including but not limited to F-1 CPT, F-1 OPT, F-1 STEM OPT, J-1, H-1B, TN, O-1, E-3, H-1B1, or L-1.

Additional Functional Job Skills & Preference
  • Team player with excellent communication skills.
  • Previous laboratory or pharmaceutical research experience in Clinical Trial Planning and Design, Clinical Trial Investigator Selection and Oversight, Patient Recruitment and Enrollment, Clinical Diagnostic and Laboratory Science, Clinical Systems Management, Medical Writing, Communication and Documentation, Clinical Supply and Delivery, Clinical Trial Budgeting and Financial Management, or Clinical Research Training and Education.
  • Prior experience using AI tools (e.g., generative AI platforms, automation tools, or AI-assisted research/analytics tools) in an academic, project, or work setting.
About Eli Lilly and Company

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE@Lilly), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Womenโ€™s Initiative for Leading at Lilly (WILL).

Actual compensation will depend on a candidateโ€™s education, experience, skills, and geographic location.

The anticipated wage for this position is $70,000 - $92,000 Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).

Actual compensation will depend on a candidateโ€™s education, experience, skills, and geographic location.

The anticipated wage for this position is $65,250 - $148,500 Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE@Lilly), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Womenโ€™s Initiative for Leading at Lilly (WILL).

WeAreLilly

At Lilly we strive to ensure our employees are part of a team that cares about them and our shared purpose of making life better for those around the world. How do we do this? We continue to look for ways to include, innovate, accelerate and deliver while maintaining integrity, excellence and respect for people. We hope that you seek to join us on our journey as we create medicine and deliver improved outcomes for patients across the globe!

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