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Biotech Process Engineer Jobs in Madison, WI (NOW HIRING)

Producing documentation to support medical device regulatory processes Who This Is For * Students ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

Producing documentation to support medical device regulatory processes Who This Is For * Students ... biotechnology. Our global teams work every day to solve the world's most complex challenges by ...

Manufacturing Engineer

Waunakee, WI · On-site

$69K - $85K/yr

This is a great opportunity for an early-career engineer looking to develop hands-on experience in ... processes Travel * Less than 10% Business Overview Genus is an agricultural biotechnology pioneer.

This is a great opportunity for an earlycareer engineer looking to develop handson experience in a ... processes Travel * Less than 10% Business Overview Genus is an agricultural biotechnology pioneer.

This is a great opportunity for an earlycareer engineer looking to develop handson experience in a ... processes Travel * Less than 10% Business Overview Genus is an agricultural biotechnology pioneer.

This is a great opportunity for an earlycareer engineer looking to develop handson experience in a ... processes Travel * Less than 10% Genus is an agricultural biotechnology pioneer. We are a global ...

Implement new technologies and processes to improve packaging performance and efficiency. 7. Strong ... in the biotech, pharmaceutical, diagnostics, OTC, food, or beverage industry. 3. Strong ...

Implement new technologies and processes to improve packaging performance and efficiency. 7. Strong ... in the biotech, pharmaceutical, diagnostics, OTC, food, or beverage industry. 3. Strong ...

Product Design Engineer, IoT

Madison, WI · On-site

$130K - $156K/yr

... processes for global standards such as FCC, CE, ISO, and potentially FDA 21 CFR Part 820 or ISO ... biotech. 2. Experience designing products from initial concept phase through installation and ...

Product Design Engineer, IoT

Madison, WI · On-site

$130K - $156K/yr

... processes for global standards such as FCC, CE, ISO, and potentially FDA 21 CFR Part 820 or ISO ... biotech. 2. Experience designing products from initial concept phase through installation and ...

Product Design Engineer, IoT

Madison, WI

$130K - $156K/yr

... processes for global standards such as FCC, CE, ISO, and potentially FDA 21 CFR Part 820 or ISO ... biotech. 2. Experience designing products from initial concept phase through installation and ...

Product Design Engineer, IoT

Madison, WI · On-site

$130K - $156K/yr

... processes for global standards such as FCC, CE, ISO, and potentially FDA 21 CFR Part 820 or ISO ... biotech. 2. Experience designing products from initial concept phase through installation and ...

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Biotech Process Engineer information

See Madison, WI salary details

$49.9K

$92.7K

$143.6K

How much do biotech process engineer jobs pay per year?

As of Jul 31, 2026, the average yearly pay for biotech process engineer in Madison, WI is $92,733.00, according to ZipRecruiter salary data. Most workers in this role earn between $75,100.00 and $103,800.00 per year, depending on experience, location, and employer.

What engineers make $300,000 a year?

Senior biotech process engineers with extensive experience, advanced skills in bioprocessing, and leadership roles can earn $300,000 or more annually. High compensation is often associated with working in specialized areas, managing large-scale production, or holding executive-level responsibilities in the biotech industry.

What is process engineering in biotechnology?

Process engineering in biotechnology involves designing, developing, and optimizing manufacturing processes for biological products such as pharmaceuticals, vaccines, and biofuels. Biotech process engineers work with equipment like bioreactors and use techniques such as fermentation and purification to ensure efficient, scalable, and compliant production. They often require knowledge of chemical engineering principles, laboratory skills, and familiarity with regulatory standards.

What engineers make $500,000?

Senior biotech process engineers with extensive experience, advanced skills in bioprocessing, and leadership roles can earn salaries approaching or exceeding $500,000, especially in high-cost-of-living areas or with bonuses and stock options. Such compensation typically requires a combination of technical expertise, management responsibilities, and industry demand.

What is the difference between Biotech Process Engineer vs Biotech Manufacturing Technician?

AspectBiotech Process EngineerBiotech Manufacturing Technician
CredentialsBachelor's degree in biotech, chemical engineering, or related field; often requires experience in process designAssociate's or bachelor's degree; focus on operational skills and equipment handling
Work EnvironmentDesigning, optimizing, and overseeing production processes in labs or manufacturing facilitiesOperating and maintaining equipment on the manufacturing floor
Job FocusProcess development, scale-up, troubleshooting, and process improvementExecuting production tasks, quality checks, and equipment setup

Biotech Process Engineers focus on designing and improving manufacturing processes, requiring technical and analytical skills. In contrast, Biotech Manufacturing Technicians handle day-to-day production operations. Both roles are essential in biotech manufacturing but differ in responsibilities and required qualifications.

What are some common challenges faced by Biotech Process Engineers during scale-up from laboratory to production?

Biotech Process Engineers often encounter challenges when scaling up processes from laboratory or pilot scale to full production. These challenges can include maintaining product consistency, ensuring process sterility, and adapting equipment to handle larger volumes without compromising yield or quality. Engineers must also collaborate closely with cross-functional teams such as quality assurance, validation, and manufacturing to implement changes efficiently and adhere to regulatory standards. Proactive problem-solving and strong communication skills are key to overcoming these hurdles and ensuring successful technology transfer.

What does a Biotech Process Engineer do?

A Biotech Process Engineer designs, develops, and optimizes processes used in the production of biological products such as pharmaceuticals, vaccines, and biofuels. They work closely with scientists and manufacturing teams to scale up lab procedures to industrial levels while ensuring product quality and regulatory compliance. Their role often involves troubleshooting equipment, improving efficiency, and implementing new technologies within biotech manufacturing environments.

What engineers make $200,000 a year?

Biotech process engineers can earn $200,000 or more annually, especially with extensive experience, advanced degrees, or leadership roles in the industry. High salaries are often associated with senior positions, specialized skills in bioprocessing, and working in competitive biotech or pharmaceutical companies.

What are the key skills and qualifications needed to thrive as a Biotech Process Engineer, and why are they important?

To thrive as a Biotech Process Engineer, you need a solid background in chemical or biochemical engineering, process design, and regulatory compliance, typically supported by a relevant bachelor's or master's degree. Familiarity with process control systems, bioprocess simulation software, and industry-standard quality systems such as cGMP is essential. Strong analytical thinking, problem-solving abilities, and effective teamwork and communication skills help you excel in cross-functional environments. These skills ensure efficient, compliant, and innovative bioprocess operations, which are critical for product quality and organizational success.
What job categories do people searching Biotech Process Engineer jobs in Madison, WI look for? The top searched job categories for Biotech Process Engineer jobs in Madison, WI are:
Infographic showing various Biotech Process Engineer job openings in Madison, WI as of July 2026, with employment types broken down into 72% Full Time, and 28% Contract. Highlights an 100% In-person job distribution, with an average salary of $92,733 per year, or $44.6 per hour.

Process Development Engineer

Scientific Protein Laboratories

Waunakee, WI • On-site

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted yesterday

New


Job description

JOB SUMMARY

Join our team at Scientific Protein Laboratories (SPL), a world leader in biosourced pharmaceuticals, located just outside of Madison, Wisconsin in Waunakee! SPL is an innovative biopharmaceutical leader with unique products and services supporting the pharmaceutical industry globally. For over 40 years, SPL specializes in the development and cGMP compliant manufacturing of Active Pharmaceutical Ingredients (APIs). SPL has an exciting opportunity to join the team as a Process Development Engineer.

The Process Development Engineer provides technical and engineering expertise to support SPL's process development and manufacturing activities. This role is responsible for the development, scale- up, optimization, and technology transfer of manufacturing processes from the laboratory and pilot scale development through commercial GMP manufacturing. The Process Development Engineer performs Engineering analyses to develop robust manufacturing processes and process specifications that meet product quality, performance, and regulatory requirements. This position provides technical expertise on manufacturing technologies, process design, equipment selection, materials, and process capabilities and applies sound engineering principles to solve technical challenges and recommend effective process solutions.

Responsibilities include:

  • Lead the scale-up and technology transfer of new product manufacturing processes from laboratory and pilot-scale development to commercial manufacturing.
  • Implement, and optimize commercial manufacturing processes to ensure product quality, process robustness, and operational efficiency.
  • Identify process equipment and operating parameters for new manufacturing processes. Collaborate with Engineering and external equipment vendors to evaluate and implement manufacturing technologies.
  • Prepare process flow diagrams (PFDs), mass balances, process analyses, expected yield calculations, and manufacturing instructions.
  • Design, coordinate, and execute engineering batches to support process development, process optimization, and technology transfer activities.
  • Prepare technical reports, development protocols, SOPs, equipment operating instructions, and other engineering and manufacturing documentation.
  • Analyze manufacturing and production data to identify trends, improve process performance, maximize yields, and proactively prevent manufacturing issues.
  • Provide technical support for manufacturing operations, including troubleshooting, deviation investigations, root cause analysis, and implementation of corrective and preventive actions (CAPAs).
  • Support the qualification and validation of manufacturing equipment and processes, including IQ, OQ, and PQ activities.
  • Train Operations personnel on new manufacturing processes, process improvements, and equipment.
  • Participate as a technical representative on cross-functional project teams supporting internal initiatives and customer programs.
  • Serve as a technical interface with CDMO clients by supporting process development, technology transfer, and project execution activities.
  • Ensure all activities are conducted in compliance with cGMP requirements, company procedures, and applicable regulatory standards.

Job Requirements and Qualifications:

  • Bachelor's degree in chemical engineering or related engineering disciple.
  • Minimum of 3 years of relevant industrial experience, 5+ years of process development experience in pharmaceutical, biotechnology or CDMO environments is preferred.
  • Hands-on experience with process design, process development, scale-up, technology transfer, and manufacturing equipment.
  • Strong knowledge of process engineering principles and engineering methods used in pharmaceutical or biotechnology manufacturing.
  • Experience in pharmaceutical manufacturing, biologics, or related research and development environments is preferred.
  • Excellent analytical, problem-solving, technical writing, and communication skills.
  • Ability to work effectively in cross-functional teams and manage multiple priorities in a fast-paced manufacturing environment.

WHY JOIN SPL?

Our employees are our success! We recruit motivated people, recognize their contributions, and support their development to reach their full potential.

Perks include: competitive compensation; excellent benefits package - including Medical, Dental and Vision on Day 1; Life and AD&D Insurance, and Short and Long-term Disability; Health and Flexible Saving Account options; Employee Assistance Program, generous vacation; paid Holidays; 401k; advancement opportunities; team-oriented environment; community involvement; company events and more!

SPL is an equal opportunity employer. All qualified applicants will receive consideration for employment without regard to age, color, creed, disability, gender identity, national origin, protected veteran status, race, religion, sex, sexual orientation, and any other status protected by applicable local, state or federal law.