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$43K

$131.1K

$238.5K

How much do bioinformatics engineer jobs pay per year?

As of Jun 26, 2026, the average yearly pay for bioinformatics engineer in the United States is $131,053.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,000.00 and $157,000.00 per year, depending on experience, location, and employer.

What is a Bioinformatics Engineer?

A Bioinformatics Engineer is a professional who combines expertise in computer science, statistics, and biology to develop software tools and algorithms for analyzing biological data. They often work with large datasets such as genomic sequences, protein structures, and clinical information to help scientists make sense of complex biological systems. Their work is essential in fields like genomics, personalized medicine, and drug discovery, where managing and interpreting vast amounts of data is crucial. Bioinformatics Engineers may also collaborate with researchers to design experiments and interpret results, bridging the gap between biology and technology.

What are the key skills and qualifications needed to thrive as a Bioinformatics Engineer, and why are they important?

To thrive as a Bioinformatics Engineer, you need a strong background in biology, computer science, and statistics, often supported by a degree in bioinformatics or a related field. Experience with programming languages such as Python or R, familiarity with databases, and knowledge of tools like BLAST, Bioconductor, or next-generation sequencing (NGS) analysis platforms are typically required. Strong problem-solving, analytical thinking, and effective communication skills help you collaborate with interdisciplinary teams and convey complex findings. These skills and qualifications are essential for efficiently analyzing biological data, developing robust computational tools, and advancing research in genomics and life sciences.

What Is Bioinformatics Engineering?

A bioinformatics engineer uses various methods for the analysis of complex biological data such as gene sequence and protein absorption. In this career, your job duties include performing detailed data analysis, developing data queries, and presenting your results back to the research team. The qualifications needed for a career as a bioinformatics engineer include a bachelor’s degree in engineering, statistics, computer science, or mathematics. Some employers prefer a master’s degree as well. You also need strong analytical skills and a good understanding of the biosciences.

What are some common challenges faced by Bioinformatics Engineers when integrating new data sources into existing pipelines?

Bioinformatics Engineers often encounter challenges such as data format inconsistencies, varying quality of datasets, and the need to ensure compatibility with existing analysis pipelines. Integrating new data sources may require custom scripts or tools for parsing and preprocessing, as well as thorough validation to maintain reproducibility and reliability of results. Collaboration with wet-lab scientists and software engineers is essential to clarify data requirements and streamline the integration process.

What is the difference between Bioinformatics Engineer vs Bioinformatics Analyst?

AspectBioinformatics EngineerBioinformatics Analyst
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fields; programming skillsBachelor's or Master's in Bioinformatics, Biology, or related fields; data analysis skills
Work EnvironmentResearch labs, biotech companies, pharmaceutical firmsResearch institutions, healthcare organizations, biotech companies
Employer & Industry UsageDevelops tools, pipelines, and software for biological data analysisInterprets data, performs statistical analysis, and reports findings

While both roles require a background in bioinformatics and involve working with biological data, Bioinformatics Engineers focus on developing software and tools, whereas Bioinformatics Analysts primarily analyze and interpret data to support research and decision-making.

More about Bioinformatics Engineer jobs
What cities are hiring for Bioinformatics Engineer jobs? Cities with the most Bioinformatics Engineer job openings:
What are the most commonly searched types of Bioinformatics Engineer jobs? The most popular types of Bioinformatics Engineer jobs are:
Who are the top companies hiring for Bioinformatics Engineer jobs? The top employers for Bioinformatics Engineer jobs are:
What states have the most Bioinformatics Engineer jobs? States with the most job openings for Bioinformatics Engineer jobs include:
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What are popular job titles related to Bioinformatics Engineer jobs? For Bioinformatics Engineer jobs, the most frequently searched job titles are:
Bioinformatics Engineer jobs near you
Infographic showing various Bioinformatics Engineer job openings in the United States as of June 2026, with employment types broken down into 72% Full Time, 14% Part Time, and 14% Contract. Highlights an 86% In-person, and 14% Remote job distribution, with an average salary of $131,053 per year, or $63 per hour.

Bioinformatics Pipeline Test Engineer (Fresher | 6 Months - 1 Year Exp) San Diego, Hybrid.

OMG Technologies

Iselin, NJ • On-site

$25/hr

Contractor

This job post has expired today. Applications are no longer accepted.

Job description

Bioinformatics Pipeline Test Engineer (Fresher | 6 Months - 1 Year Exp) San Diego, Hybrid.
We are looking to hire a candidate with the skills sets mentioned and experience for one of our clients within the life science Industry.
Note : Students or recent graduates in Bioinformatics, Computational Biology, or Computer Science are eligible to apply.
Job Summary:
We are seeking a Fresher (6 months - 1 year experience) with a academic or internship experience in Next-Generation Sequencing (NGS) pipelines and bioinformatics workflows.
The ideal candidate should have exposure to Illumina sequencing data, secondary analysis pipelines and workflow tools like Nextflow. This role focuses on software testing, verification, and validation (V&V) of bioinformatics pipelines used in medical devices and LDT products within a regulated environment.
Key Responsibilities:
  • Assist in developing and executing test protocols for bioinformatics software and pipelines.
  • Translate user and software requirements into test cases and validation scenarios.
  • Collaborate with bioinformatics scientists to define test strategies, inputs, and methodologies.
  • Perform functional testing to validate pipeline accuracy, performance, and reliability.
  • Generate and maintain test reports and validation documentation.
  • Support design control activities and software lifecycle documentation.
  • Contribute to documents such as SRS, design specifications, and test plans.
  • Assist in risk assessments and traceability of requirements.
  • Ensure compliance with regulatory and quality standards.
  • Follow Quality Management System (QMS) processes and best practices.

Minimum Qualifications:
  • Bachelor's degree in Bioinformatics, Computational Biology, Computer Science, or related field.
  • 6 months to 1 year of experience (internships, academic projects, or industry exposure).
  • Exposure to NGS pipelines and/or PCR-based workflows.
  • Basic understanding of software development lifecycle (SDLC) and testing concepts.
  • Familiarity with Git, Agile, or CI/CD fundamentals.
  • Awareness of regulated environments (FDA, Medical Devices, Pharma/Biotech).
  • Basic programming skills in Python.
  • Experience working with Illumina sequencing data / secondary analysis pipelines is a plus
  • Familiarity with Nextflow or similar workflow management tools.
  • Exposure to cloud platforms - AWS HealthOmics is a plus.
  • Understanding of Docker, Kubernetes, or containerization concepts.
  • Basic knowledge of standards like 21 CFR Part 11, IEC 62304, ISO 13485, ISO 14971 is a plus.

Other Job Details:
  • Location: San Diego, Hybrid.
  • Duration: 6 - 12 months
  • Candidate rate: $25 on W2
  • Docs required: ID proof will be required

Who Should Apply:
Freshers who are interested in gaining experience in Life Sciences, Bioinformatics or Medical Device Manufacturing are encouraged to apply. This role offers an excellent opportunity to build hands on experience in a regulated healthcare and bioinformatics environment.

Apply