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Contract Bioinformatics Engineer Jobs (NOW HIRING)

LatchBio

AI Biologist - Proteomics

San Francisco, CA · On-site +1

$120K - $180K/yr

Bioinformatics Engineer - Proteomics As molecular data generation and frontier model intelligence ... Compensation & Logistics * 1099 (or W8-BEN) contract, 40 hrs/week, no end date * Fully performance ...

LatchBio

AI Biologist - Biosurveillance

San Francisco, CA · On-site +1

$120K - $180K/yr

Bioinformatics Engineer - Biosurveillance As molecular data generation and frontier model ... Compensation & Logistics * 1099 (or W8-BEN) contract, 40 hrs/week, no end date * Fully performance ...

GENTY recruitment

AI Biologist

San Francisco, CA · Remote

$120K - $180K/yr

About the job Bioinformatics Engineer/AI Biologist - Biosurveillance As molecular data generation ... Compensation & Logistics * 1099 (or W8-BEN) contract, 40 hrs/week, no end date * Fully performance ...

GENTY recruitment

AI Biologist

San Francisco, CA · Remote

$120K - $180K/yr

About the job Bioinformatics Engineer/AI Biologist - Biosurveillance As molecular data generation ... Compensation & Logistics * 1099 (or W8-BEN) contract, 40 hrs/week, no end date * Fully performance ...

Lynker

Bioinformaticist

Miami, FL · On-site

Hiring for this position will be contingent on contract award. SEFSC MMTD conducts bioinformatic ... other programming languages used in data science and bioinformatics. * Experience with data ...

Lynker Corporation

Bioinformaticist

Miami, FL · On-site

Hiring for this position will be contingent on contract award. Background paragraph: SEFSC MMTD ... other programming languages used in data science and bioinformatics. * Experience with data ...

LatchBio

AI Biologist - Variant

San Francisco, CA · On-site +1

$120K - $180K/yr

Bioinformatics Engineer - Variant As molecular data generation and frontier model intelligence ... Compensation & Logistics * 1099 (or W8-BEN) contract, 40 hrs/week, no end date * Fully performance ...

AIS Inc

Bioinformaticist

Miami, FL · On-site

This position is contingent upon contract award and available funding. Duties / Responsibilities ... other programming languages used in data science and bioinformatics. * Proficiency in scripting ...

AIS, LLC

Bioinformaticist

Key Biscayne, FL · On-site

This position is contingent upon contract award and available funding. Duties / Responsibilities ... other programming languages used in data science and bioinformatics. * Proficiency in scripting ...

AIS, Inc.

Bioinformaticist

Miami, FL · On-site

This position is contingent upon contract award and available funding. Duties / Responsibilities ... other programming languages used in data science and bioinformatics. * Proficiency in scripting ...

AIS, LLC

Bioinformaticist

Miami, FL · On-site

This position is contingent upon contract award and available funding. Duties / Responsibilities ... other programming languages used in data science and bioinformatics. * Proficiency in scripting ...

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Contract Bioinformatics Engineer information

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$43K

$131.1K

$238.5K

How much do contract bioinformatics engineer jobs pay per year?

As of Aug 25, 2026, the average yearly pay for contract bioinformatics engineer in the United States is $131,053.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,000.00 and $157,000.00 per year, depending on experience, location, and employer.

What is a contract bioinformatics engineer?

Contract Bioinformatics Engineers are professionals who work on a temporary or project basis to analyze biological data using computational tools. They often collaborate with researchers and institutions in fields like genomics, pharmaceuticals, and biotechnology. Their work involves writing code, processing large datasets, and developing algorithms to interpret complex biological information. By working on a contract basis, they provide specialized expertise for specific projects without being permanent employees.

What are the key skills and qualifications needed to thrive as a contract bioinformatics engineer?

To thrive as a Contract Bioinformatics Engineer, you typically need expertise in computational biology, programming (such as Python or R), and a background in life sciences or related fields. Familiarity with bioinformatics tools, next-generation sequencing (NGS) platforms, version control systems, and data analysis software is commonly required. Strong problem-solving abilities, clear communication, and adaptability are crucial soft skills for collaborating with multidisciplinary teams and meeting project deadlines. These skills ensure efficient data interpretation, accurate results, and successful project delivery in a dynamic, contract-based environment.

What are the common challenges faced by contract bioinformatics engineers, and how can they be addressed?

Contract Bioinformatics Engineers often face challenges related to rapidly onboarding to new projects, adapting to diverse data pipelines, and working with teams that may use different workflows or tools. To address these challenges, it's important to maintain strong communication with project leads, quickly familiarize yourself with the organization’s data standards, and leverage your experience with a variety of bioinformatics tools and programming languages. Flexibility and the ability to document your work thoroughly will also help ensure smooth collaboration and successful project delivery.
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Contract Bioinformatics Engineer jobs near you
Infographic showing various Contract Bioinformatics Engineer job openings in the United States as of August 2026, with employment types broken down into 94% Full Time, 2% Part Time, and 4% Contract. Highlights an 85% Physical, 5% Hybrid, and 10% Remote job distribution, with an average salary of $131,053 per year, or $63 per hour.

Bioinformatics Software Engineer

Artech Information System LLC

South San Francisco, CA • On-site

Full-time

Re-posted 7 days ago

Job description

Company Description

Artech is the 10th Largest IT Staffing Company in the US, according to Staffing Industry Analysts' 2012 annual report. Artech provides technical expertise to fill gaps in clients' immediate skill-sets availability, deliver emerging technology skill-sets, refresh existing skill base, allow for flexibility in project planning and execution phases, and provide budgeting/financial flexibility by offering contingent labor as a variable cost.

Job Description

Job Title: Bioinformatics Software Engineer

Location: South San Francisco, CA

Duration: 11+ Months
Position Type: Contract

Duties:

  • We have a full-time temporary contractor opening (11 months) for an experienced software engineer in the Ion AmpliSeq Designer team.
  • The individual will focus on developing a brand new API web-service to enable third-party integrations with the AmpliSeq Designer software.
  • The individual will design and implement the core service and related authentication aspects, notifications, versioning, as well as work on deployment & scaling in a cloud-hosted environment.
  • The successful candidate will be part of an innovative multi-disciplinary team developing applications for Ion Torrent DNA sequencing.
  • As part of this team, they will be expected to work in a fast paced, complex setting to hard deliverables in a collaborative environment.
  • Critical thinking, determination to succeed, the willingness and courage to push the boundaries on the possible and the drive to deliver are key attributes.

Primary responsibilities include:

  • Design, develop, and test API web-services to enable third party integrations of AmpliSeq Designer functionality.
  • Integrate such API with existing backend data analysis pipelines and databases.
  • Document and maintain API specifications, coordinate with clients of the API.
  • Handle authentication, status notifications, versioning and related aspects.
  • Develop automation tools and scripts to aid testing of the API using real and mock data.
  • Collaborate with a team of software developers and bioinformatics scientists to deliver software features in release cycles (in an agile development process).

Requirements:

  • Experience with multiple complete product development life cycles from concept to development and product testing and final release.
  • Excellent communication and organization skills.
  • Proven expertise with Java and web-service frameworks like Play, DropWizard, etc.
  • Experience with designing APIs, building REST-ful webservices, working with SQL databases.
  • Proven expertise with Perl, Python, or UNIX scripting.
  • Bioinformatics background knowledge (genomics, molecular biology) and skills (NGS, assay design, tools, file-formats etc.) are a strong plus.
  • Prefer experience with cloud computing, AWS, docker, scaling.
Additional Information

Vishnu Kumar

Technical Recruiter 

Artech Information Systems LLC 

360 Mt. Kemble Avenue, Suite 2000 | Morristown, NJ 07960 

Office: +1.973.967.3585 | Fax: 973.998.2599

Artech logo

About Artech

Sourced by ZipRecruiter

Artech is a leading IT staffing and consulting company based in Morristown, NJ, US. Since its foundation in 1992, Artech has mastered in complementing human expertise with technology and business acumen to produce world-class staffing solutions. The company caters to diverse industry sectors, including financial services, healthcare, telecommunication, energy and utilities, supply chain, and retail. It provides IT consulting, project management, professional and staff augmentation, and managed staffing services. Artech's mission is to provide exceptional IT staffing services to its clients by comprehending their business needs and then crafting a customized staffing strategy. Its notable achievement includes being recognized as one of the largest IT staffing companies in the U.S, according to Staffing Industry Analysts (SIA).

Industry

Recruiting and staffing services

Company size

10,000+ Employees

Headquarters location

Morristown, NJ, US

Year founded

1992

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