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Contract Bioinformatics Engineer Jobs (NOW HIRING)

Kelly Services

Bioinformatics Scientist

Bethesda, MD · On-site +1

This is a long-term contract position which offers: * Competitive compensation and comprehensive ... engineering, technology, professional, and administrative support roles. Our experts will connect ...

Roche

Sr. Manager, Bioinformatics

San Diego, CA · Hybrid

$170K - $316K/yr

You will lead an elite team of bioinformatics scientists and software engineers to create bespoke ... complex contract closures. This position is based on-site in Santa Clara, CA or San Diego, CA ...

Roche

Sr. Manager, Bioinformatics

Santa Clara, CA · Hybrid

$170K - $316K/yr

You will lead an elite team of bioinformatics scientists and software engineers to create bespoke ... complex contract closures. This position is based on-site in Santa Clara, CA or San Diego, CA ...

Lynker Corporation

Bioinformaticist

Miami, FL

Hiring for this position will be contingent on contract award. Background paragraph: SEFSC MMTD ... other programming languages used in data science and bioinformatics. * Experience with data ...

Kelly Services

Bioinformatics Scientist

Bethesda, MD

... ring, scientific, and healthcare professionals the opportunity to work with one of the most ... This is a long-term contract position which offers: * Competitive compensation and comprehensive ...

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Contract Bioinformatics Engineer information

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$43K

$131.1K

$238.5K

How much do contract bioinformatics engineer jobs pay per year?

As of Jul 16, 2026, the average yearly pay for contract bioinformatics engineer in the United States is $131,053.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,000.00 and $157,000.00 per year, depending on experience, location, and employer.

What are Contract Bioinformatics Engineers?

Contract Bioinformatics Engineers are professionals who work on a temporary or project basis to analyze biological data using computational tools. They often collaborate with researchers and institutions in fields like genomics, pharmaceuticals, and biotechnology. Their work involves writing code, processing large datasets, and developing algorithms to interpret complex biological information. By working on a contract basis, they provide specialized expertise for specific projects without being permanent employees.

What are the common challenges faced by Contract Bioinformatics Engineers, and how can they be addressed?

Contract Bioinformatics Engineers often face challenges related to rapidly onboarding to new projects, adapting to diverse data pipelines, and working with teams that may use different workflows or tools. To address these challenges, it's important to maintain strong communication with project leads, quickly familiarize yourself with the organization’s data standards, and leverage your experience with a variety of bioinformatics tools and programming languages. Flexibility and the ability to document your work thoroughly will also help ensure smooth collaboration and successful project delivery.

What are the key skills and qualifications needed to thrive as a Contract Bioinformatics Engineer, and why are they important?

To thrive as a Contract Bioinformatics Engineer, you typically need expertise in computational biology, programming (such as Python or R), and a background in life sciences or related fields. Familiarity with bioinformatics tools, next-generation sequencing (NGS) platforms, version control systems, and data analysis software is commonly required. Strong problem-solving abilities, clear communication, and adaptability are crucial soft skills for collaborating with multidisciplinary teams and meeting project deadlines. These skills ensure efficient data interpretation, accurate results, and successful project delivery in a dynamic, contract-based environment.
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Contract Bioinformatics Engineer jobs near you

Bioinformatics Pipeline Test Engineer

Yantran LLC

Irvine, CA • On-site

Other

Posted 7 days ago

Job description

Experience: 2+ Years of exp Hire Type (FTE/Contract): 6 Months Must Have: Bioinformatics OR Genomics NGS OR "Next Generation Sequencing" VCF OR BAM OR FASTQ Python Testing OR QA OR "Quality Engineer" OR Validation Git Job Description: Role Overview We are seeking a Bioinformatics Test Engineer to validate and ensure the quality of NGS data pipelines and bioinformatics workflows. The role requires a strong blend of bioinformatics knowledge, QA expertise, and automation skills. Key Responsibilities Design and execute testing strategies for NGS pipelines (alignment, variant calling, annotation) Perform data validation, regression testing, and discrepancy analysis Develop automated test scripts (Python) Translate requirements into test cases and validation criteria Work with CI/CD pipelines and cloud-based workflows Collaborate with cross-functional teams to ensure data accuracy and reliability Required Skills Strong understanding of NGS workflows (FASTQ, BAM, VCF) Experience in bioinformatics pipeline testing or QA Proficiency in Python scripting Hands-on with Git and CI/CD tools Experience with cloud platforms (AWS/GCP/Azure) and data pipelines Strong problem-solving and communication skills Preferred Experience in biotech/life sciences domain Familiarity with Nextflow, Snakemake, or similar workflows Exposure to regulated environments (CLIA/FDA) What We’re Looking For Strong testing mindset + hands-on engineering skills Ability to debug pipelines and explain thought process clearly Experience with real-world data workflows (not just academic projects) Mentions NGS pipelines + testing together Has Python + Git + CI/CD Mentions variant calling / VCF validation Worked on cloud or production pipelines Reject or deprioritize if: Only academic bioinformatics (no testing/QA) Only statistics validation (no system testing) No Python or automation No infra experience (cloud / CI/CD / DB) Only local scripts, no real pipelines Other High Priority Keywords Variant Calling Pipeline Testing Regression Testing Test Strategy OR Test Case Design Data Validation Golden Dataset OR Reference Dataset CI/CD OR "GitHub Actions" OR GitLab OR "Azure DevOps" AWS OR S3 OR Cloud Nextflow OR Snakemake OR WDL OR Cromwell Automation Testing

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