1

Automation Engineer Ii Jobs (NOW HIRING)

... 2+ years of relevant experience, or * MS in Engineering, Computer Science, Biotechnology ... Experience integrating automation platforms with LIMS, databases, or other laboratory software ...

Manufacturing Automation Engineer II

Scarborough, ME · On-site

$89K - $115K/yr

Manufacturing Automation Engineer II Working at Abbott At Abbott, you can do work that matters, grow, and learn, care for yourself and your family, be your true self, and live a full life. You'll ...

As an Automation, Instrumentation and Controls (AIC) Engineer II , you will play a vital role in designing and implementing high-performance automation systems that support manufacturing processes ...

As an Automation, Instrumentation and Controls (AIC) Engineer II , you will play a vital role in designing and implementing high-performance automation systems that support manufacturing processes ...

Manufacturing Automation Engineer II

Scarborough, ME · On-site

$89K - $115K/yr

Manufacturing Automation Engineer II Working at Abbott At Abbott, you can do work that matters, grow, and learn, care for yourself and your family, be your true self, and live a full life. You'll ...

As an Automation, Instrumentation and Controls (AIC) Engineer II , you will play a vital role in designing and implementing high-performance automation systems that support manufacturing processes ...

Automation Engineer II will be primarily engaged in the development, implementation, and modification activities of the plant vision systems, controls, motion, and communications systems. Duties ...

Manufacturing Automation Engineer II

Scarborough, ME · On-site

$89K - $115K/yr

Manufacturing Automation Engineer II Working at Abbott At Abbott, you can do work that matters, grow, and learn, care for yourself and your family, be your true self, and live a full life. You'll ...

NC · On-site

$77K - $100K/yr

About This Role The Automation Engineer II/III provides 24/7 process controls/automation technical site support to the Biogen 900 Davis drive, NC manufacturing site. In addition, this role manages ...

Automation Engineer II

Bridgewater, MA · On-site

$111 - $150/hr

The Service Automation Controls Engineer is responsible for supporting, troubleshooting, and improving automation control solutions used in biopharmaceutical manufacturing and laboratory environments.

The Service Automation Controls Engineer is responsible for supporting, troubleshooting, and improving automation control solutions used in biopharmaceutical manufacturing and laboratory environments.

Automation Engineer II

Bridgewater, MA · On-site

$111 - $150/hr

The Service Automation Controls Engineer is responsible for supporting, troubleshooting, and improving automation control solutions used in biopharmaceutical manufacturing and laboratory environments.

Automation Engineer II will be primarily engaged in the development, implementation, and modification activities of the plant vision systems, controls, motion, and communications systems. Duties ...

Showing results 41-60

Automation Engineer II information

See salary details

$37K

$107.1K

$163K

How much do automation engineer ii jobs pay per year?

As of Aug 22, 2026, the average yearly pay for automation engineer ii in the United States is $107,126.00, according to ZipRecruiter salary data. Most workers in this role earn between $86,500.00 and $123,500.00 per year, depending on experience, location, and employer.

What does an Automation Engineer II do?

An Automation Engineer II is responsible for designing, developing, and maintaining automated systems and processes within a company. They work on improving efficiency, reliability, and safety by automating repetitive or complex tasks, often using software, robotics, or control systems. The 'II' typically indicates a mid-level role, meaning they have some experience and may mentor junior engineers or handle more complex projects. Their work spans various industries, including manufacturing, IT, and energy.

What are the key skills and qualifications needed to thrive as an Automation Engineer II?

To thrive as an Automation Engineer II, you need a solid understanding of automation technologies, programming (such as Python, PLC, or SCADA), and a relevant engineering degree. Familiarity with industrial control systems, automation software (like Rockwell or Siemens), and certifications such as ISA or Six Sigma are commonly required. Strong problem-solving abilities, attention to detail, and effective communication skills help you excel in designing and troubleshooting complex systems. These competencies ensure reliable automation solutions, increased productivity, and effective teamwork in industrial environments.

What are some common challenges Automation Engineer II professionals face when implementing new automation solutions?

Automation Engineer II professionals often encounter challenges such as integrating new automation technologies with legacy systems, ensuring minimal disruption to production processes, and maintaining compliance with industry standards. Balancing the need for innovation with budget constraints and tight project deadlines can also be demanding. Additionally, effective collaboration with cross-functional teams—such as IT, production, and quality assurance—is essential to address technical issues and ensure successful deployment of automation solutions.

What is the difference between Automation Engineer Ii vs Automation Engineer I?

AspectAutomation Engineer IAutomation Engineer II
Required CredentialsBachelor's in Engineering or related field; some certificationsBachelor's or higher; often holds certifications like ISTQB or similar
Work EnvironmentEntry-level projects, supervised tasks, basic automationMore complex projects, independent work, troubleshooting
Employer & Industry UsageManufacturing, software testing, industrial automationManufacturing, software, industrial automation, more responsibility

The main difference between Automation Engineer I and II lies in experience and complexity of tasks. Automation Engineer II typically handles more advanced projects, requires greater independence, and may hold additional certifications. Both roles are common in manufacturing and software industries, but the II level involves a higher level of expertise and responsibility.

More about Automation Engineer II jobs

What states have the most Automation Engineer Ii jobs?

States with the most job openings for Automation Engineer Ii jobs include:

What job categories do people searching Automation Engineer Ii jobs look for?

The top searched job categories for Automation Engineer Ii jobs are:

Infographic showing various Automation Engineer Ii job openings in the United States as of August 2026, with employment types broken down into 94% Full Time, 2% Part Time, and 4% Contract. Highlights an 85% Physical, 6% Hybrid, and 9% Remote job distribution, with an average salary of $107,126 per year, or $51.5 per hour.

Full-time

Re-posted 3 days ago


Job description

KEY RESPONSIBILITIES

  • Independently gather and translate user requirements into automated workflow solutions.
  • Develop, test, implement, and optimize automated laboratory assays and workflows to improve operational efficiency, throughput, quality, and reliability.
  • Perform verification and validation activities in accordance with regulatory and quality requirements.
  • Configure, program, troubleshoot, and maintain automated liquid handling instrument software and associated systems.
  • Collaborate with Information Technology (IT) and laboratory teams to support system integrations, data management, and Laboratory Information Management System (LIMS) interfaces.
  • Provide technical support for laboratory automation systems, including troubleshooting hardware, software, workflow, and integration issues.
  • Perform calibration, maintenance, and repair activities on laboratory automation equipment and supporting instrumentation.
  • Participate in on-call support rotation for production automation systems.
  • Train laboratory personnel on automated workflows, equipment operation, and best practices.
  • Generate, maintain, and revise SOPs, work instructions, validation documentation, and other automation-related records.
  • Track, document, and manage changes to automation methods, software configurations, and workflows.
  • Analyze operational data and identify opportunities for process improvement and increased system reliability.
  • Support automation projects from concept through deployment and operational handoff.
  • Collaborate with vendors and internal stakeholders to evaluate, implement, and support automation solutions.
  • Participate in continuous improvement initiatives and contribute technical recommendations.
  • Perform other job-related duties as assigned.
  • Adhere to the Code of Conduct as outlined in Baylor Genetics' Compliance Program.

QUALIFICATIONS

Required

  • BS in Engineering, Computer Science, Biotechnology, Biochemistry, or a related field with 2+ years of relevant experience, or
  • MS in Engineering, Computer Science, Biotechnology, Biochemistry, or a related field with 1+ years of relevant experience
  • Experience working in a biotechnology, clinical laboratory, or related environment.
  • Experience operating, supporting, and developing methods for automated liquid handling systems. Preferred platforms include Tecan, Beckman, Hamilton, or equivalent laboratory automation systems.
  • Ability to independently troubleshoot and resolve issues involving liquid handling equipment and general laboratory instrumentation.
  • Strong programming skills in Visual Basic, Python, SQL, or equivalent programming languages.
  • Good laboratory and organizational skills; the ability to work independently and efficiently is essential.
  • Strong creative thinking and problem-solving skills.
  • Strong written and verbal communication skills.
  • Ability to collect, analyze, and interpret data to support verification, validation, calibration, and troubleshooting activities.
  • Strong Microsoft Excel data manipulation and analysis skills.
  • Ability to develop algorithms, scripts, and software solutions to support automation and data analysis needs.
  • Mechanical aptitude and understanding of laboratory automation systems; strong spatial reasoning skills.
  • Understanding of basic statistical concepts, including accuracy, precision, variability, and trend analysis.
  • SQL and database knowledge.

Preferred

  • Experience integrating automation platforms with LIMS, databases, or other laboratory software systems.
  • Experience supporting production laboratory operations in a regulated environment.
  • Knowledge of Lean, Six Sigma, or other continuous improvement methodologies.
  • Experience participating in automation project implementation, system commissioning and deployment.

COMPETENCIES

  • Analytical--Synthesizes complex or diverse information; Collects and researches data; Uses intuition and experience to complement data; Designs workflows and procedures.
  • Problem Solving--Identifies and resolves problems in a timely manner; Gathers and analyzes information skillfully; Develops alternative solutions; Works well in group problem solving situations; Uses reason even when dealing with emotional topics.
  • Technical Skills--Assesses own strengths and weaknesses; Pursues training and development opportunities; Strives to continuously build knowledge and skills; Shares expertise with others.
  • Interpersonal Skills--Focuses on solving conflict, not blaming; Maintains confidentiality; Listens to others without interrupting; Keeps emotions under control; Remains open to others' ideas and tries new things.
  • Oral Communication--Speaks clearly and persuasively in positive or negative situations; Listens and gets clarification; Responds well to questions; Demonstrates group presentation skills; Participates in meetings.
  • Written Communication--Writes clearly and informatively; Edits work for spelling and grammar; Varies writing style to meet needs; Presents numerical data effectively; Able to read and interpret written information.
  • Teamwork--Balances team and individual responsibilities; Exhibits objectivity and openness to others' views; Gives and welcomes feedback; Contributes to building a positive team spirit; Puts success of team above own interests; Able to build morale and group commitments to goals and objectives; Supports everyone's efforts to succeed.
  • Leadership--Exhibits confidence in self and others; Inspires and motivates others to perform well; Effectively influences actions and opinions of others; Accepts feedback from others; Gives appropriate recognition to others.
  • Ethics--Treats people with respect; Keeps commitments; Inspires the trust of others; Works with integrity and ethically; Upholds organizational values.
  • Professionalism--Approaches others in a tactful manner; Reacts well under pressure; Treats others with respect and consideration regardless of their status or position; Accepts responsibility for own actions; Follows through on commitments.
  • Adaptability--Adapts to changes in the work environment; Manages competing demands; Changes approach or method to best fit the situation; Able to deal with frequent change, delays, or unexpected events.
  • Dependability--Follows instructions, responds to management direction; Takes responsibility for own actions; Keeps commitments; Commits to long hours of work when necessary to reach goals; Completes tasks on time or notifies appropriate person with an alternate plan.
  • Innovation--Displays original thinking and creativity; Meets challenges with resourcefulness; Generates suggestions for improving work; Develops innovative approaches and ideas; Presents ideas and information in a manner that gets others' attention.

PHYSICAL DEMANDS AND WORK ENVIRONMENT

  • Frequently required to sit
  • Frequently required to utilize hand and finger dexterity
  • Frequently required to talk or hear
  • Frequently required utilize visual acuity to operate equipment, read technical information, and/or use keyboard
  • Occasionally exposure to bloodborne and airborne pathogens or infectious materials

EEO STATEMENT

Baylor Genetics is proud to be an equal opportunity employer committed to fostering an inclusive and diverse workplace. We welcome and encourage applicants from all backgrounds to apply. We do not discriminate on the basis of race, color, religion, national origin, sex, sexual orientation, gender identity, age, veteran status, disability, genetic information, pregnancy, childbirth, or any other status protected by applicable federal, state, or local law. If you need an accommodation during the application process, please contact our Human Resources team.