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Single Molecule Microscopy Jobs (NOW HIRING)

$48K - $65K/yr

We leverage single-molecule super-resolution imaging, advanced lattice light sheet microscopy and other state of the art biophysical approaches to study molecular mechanisms of transcription, genome ...

Postdoctoral Fellow

Cambridge, MA · On-site

$54K - $73K/yr

Single-molecule fluorescence and FRET; Lasers; Pump-probe experiments -Biophysics of cell signaling ... devices -Electron microscopy (cryo and regular) for structural and cell biology;

... STED and single-molecule localization microscopy. * The Research Assistant may also gain experience in optics and computation, including optical design and alignment, numerical modeling and ...

Research Assistant

Nashville, TN · On-site

$18.50 - $25.50/hr

Recent faculty recruits are studying cell migration using super-resolution microscopy, single molecule analysis of microtubule dynamics, systems biology of intestinal epithelia, stem cell biology ...

... STED and single-molecule localization microscopy. * The Research Assistant may also gain experience in optics and computation, including optical design and alignment, numerical modeling and ...

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Single Molecule Microscopy information

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$37K

$106K

$142.5K

How much do single molecule microscopy jobs pay per year?

As of Jun 8, 2026, the average yearly pay for single molecule microscopy in the United States is $106,012.00, according to ZipRecruiter salary data. Most workers in this role earn between $104,000.00 and $104,000.00 per year, depending on experience, location, and employer.

What is single molecule microscopy?

Single molecule microscopy is an advanced imaging technique that allows scientists to observe and analyze individual molecules in real time, often within living cells. Unlike traditional microscopy, which looks at the collective behavior of many molecules, this method provides detailed insights into molecular interactions, dynamics, and functions at the single-molecule level. It is widely used in biophysics, chemistry, and cell biology to study processes such as protein folding, enzyme activity, and molecular transport. This technique requires highly sensitive equipment and specialized fluorescent labeling to detect and track single molecules with great precision.

What are the key skills and qualifications needed to thrive as a Single Molecule Microscopy Specialist, and why are they important?

To thrive in Single Molecule Microscopy, you need a strong background in physics, chemistry, or biology, typically with an advanced degree and experience in microscopy techniques. Familiarity with advanced fluorescence microscopy systems, data analysis software (such as ImageJ or MATLAB), and often certifications in laboratory safety are important. Attention to detail, problem-solving abilities, and effective communication help in troubleshooting experiments and collaborating with multidisciplinary teams. These skills are essential for generating accurate data, driving scientific discovery, and ensuring the reliability of experimental results.

What is the difference between Single Molecule Microscopy vs Fluorescence Microscopist?

AspectSingle Molecule MicroscopyFluorescence Microscopist
Required CredentialsAdvanced microscopy training, possibly PhD in biology or physicsSimilar; microscopy experience, often with a background in biology or chemistry
Work EnvironmentResearch labs, academic institutions, biotech companiesResearch labs, hospitals, biotech firms
Industry UsageSpecialized research in molecular biology, biophysicsBroad applications in cell biology, medical research

Single Molecule Microscopy and Fluorescence Microscopist roles share similar credentials and work environments, but Single Molecule Microscopy focuses on observing individual molecules, requiring specialized techniques. Fluorescence Microscopists often work with broader fluorescence imaging, making the roles distinct yet related in microscopy expertise.

What are some common challenges faced by single molecule microscopy researchers, and how can they be addressed?

Single molecule microscopy researchers often encounter challenges such as minimizing background noise, achieving high-resolution imaging, and ensuring sample stability during prolonged observations. Addressing these issues typically involves optimizing sample preparation protocols, using advanced imaging techniques like Total Internal Reflection Fluorescence (TIRF) microscopy, and implementing robust data analysis tools. Collaborating closely with physicists, chemists, and bioinformaticians can also help troubleshoot technical hurdles and improve experimental outcomes.
More about Single Molecule Microscopy jobs
What cities are hiring for Single Molecule Microscopy jobs? Cities with the most Single Molecule Microscopy job openings:
What states have the most Single Molecule Microscopy jobs? States with the most job openings for Single Molecule Microscopy jobs include:
What job categories do people searching Single Molecule Microscopy jobs look for? The top searched job categories for Single Molecule Microscopy jobs are:
Infographic showing various Single Molecule Microscopy job openings in the United States as of May 2026, with employment types broken down into 100% Full Time. Highlights an 100% In-person job distribution, with an average salary of $106,012 per year, or $51 per hour.
Director of Scientific Research, Single-molecule Imaging Center

Director of Scientific Research, Single-molecule Imaging Center

St. Jude Children's Research Hospital

Memphis, TN • On-site

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 8 days ago


St. Jude Children's Research Hospital rating

8.4

Company rating: 8.4 out of 10

Based on 9 frontline employees who took The Breakroom Quiz

61st of 994 rated hospitals


Job description

The Department of Structural Biology at St Jude Children's Research Hospital is seeking to hire a Director of the Single-Molecule imaging Center (SMC) to lead an interdisciplinary team, whose backgrounds span computer science, engineering, applied math, biophysics and biology, to advance the frontiers of single-molecule research while also implementing focused strategies to work with non-experts seeking to incorporate single-molecule methods into their discovery pipeline.
The World's Brightest Minds Always Innovate
At St. Jude Children's Research Hospital, we know what can be achieved when the brightest scientific minds face the fewest barriers. That's why we provide world-class facilities. State-of-the-art technologies. Extraordinary support. And a collaborative, bench-to-bedside environment where you can see, firsthand, how your science translates into survival for the children we serve. Quite simply, at St. Jude, we encourage you to dream big and stop at nothing when it comes to finding cures and saving children.
Summary
The ideal candidate has extensive experience developing and utilizing single-molecule fluorescence microscopy methods to reveal new insights in biology and/or medicine and sufficient technical background to design and implement hardware and software solutions that facilitate instrument stability, experimental throughput and Center accessibility as well as teach and disseminate knowledge to non-experts.
The mission of the SMC at St. Jude is to push the frontiers of single-molecule methods development across multiple modalities, while making these technologies accessible to a broad user base of biology-focused scientists within the department of Structural Biology, and across the Institution and its affiliates.
The SMC is integrated into a community of institutionally-funded laboratories and innovation centers at St. Jude, each with their own dedicated staff, including the Cryo-EM Center, the Protein Technology Center, the Cell and Tissue Imaging Center, The Center for Bioimage Informatics, The Center for Applied Bioinformatics, the Center of Excellence for Data-driven Discovery and the Center for Advanced Genome Engineering (CAGE).
The SMC houses a variety of cutting-edge single-molecule instruments, both in vitro and in living cells, with a mission to utilize these technologies for high-impact projects that advance the understanding and treatment of catastrophic childhood diseases, including infectious diseases and cancers. This includes instruments for confocal time-correlated single-photon counting (PicoQuant MT200), spinning disk confocal, objective-based TIRF, prism-based TIRF, combined fluorescence and optical trap (Lumicks C-Trap), and DNA curtain measurements. While some instruments have commercial foundations, most have been customized, or home-built, to maximize data quality, throughput, time resolution, and ease of use by non-experts. To facilitate engagement and the data colletion-to-publication processes, the SMCmaintains bespoke software tools for instrument control, data acquisition (FLASH), and data analysis (SPARTAN) softwares,which are disseminated for widespread use by the single-molecule community.
The SMC is integrated with other resources at St Jude that provide access to 3D printers, laser engravers, an on-site machine shop for creating custom-engineered microscope hardware, high-performance computing resources for software development and data management, as well as technology infrastructures for surface chemistry and microfluidics.
Technologies within the SMC have enabled discoveries in a wide variety of biological systems, including the cystic fibrosis transmembrane receptor (CFTR), β-arrestins, G-protein coupled receptors (GPCRs), transporters, riboswitches, periplasmic amino acid binding proteins, bacterial/human ribosomes, whole viral particles, and more.
The successful candidate will continue this history of success by guiding collaborators to achieve single molecule resolution to a wide variety of clinically important biological systems.
Responsibilities
  • Direct Center activity on a day-to-day basis to ensure staff are efficiently tasked, instruments are properly functioning and correctly utilized, and data is appropriately managed.
  • Lead the planning and implementation of experimental strategies and next generation instruments to ensure the Center stays at the technological frontier.
  • Oversee and contribute to the development of software tools for instrument control, data analysis, and project management, pursuing continued technical advances while ensuring seamless operations.
  • Lead high-impact collaborations with laboratories at St Jude to leverage single-molecule methods for investigations of diverse biological systems with scientists who may not have previous experience.
  • Lead internal projects that advance the state-of-the-art methods enabling single-molecule research, including the design of new instrumentation that implements innovations in surface chemistry, fluorophore engineering, optical treatments, microfluidic strategies, camera technologies, software developments, and algorithms for robust analyses.
  • Establish policies and procedures for users and staff to maximize the productivity of Center resources and keep the instruments performing optimally.
  • Serve as manager for SMC staff members with diverse technical backgrounds.
  • Participate and contribute to seminars and conferences to present research findings, keep up-to-date on scientific research and emerging imaging technologies, disseminate knowledge about single-molecule methods and quantitation and recruit talent to the SMC and St. Jude.

Minimum Education and/or Training
  • Bachelor's degree in relevant scientific discipline is required.

Minimum Experience:
  • 10+ years of experience in relevant technical field (industry or academia) is required with a Bachelor's degree.
  • 8+ years of experience in relevant technical field is required with a Master's degree.
  • 5+ years of experience in relevant technical field is required with a Ph.D.
  • Significant experience in a research functional area with experience managing mid-large teams in a leadership capacity with focus on both achievement of objectives as well as critical skill-building preferred.
  • Experience having led large-scale projects/processes through to implementation preferred.
  • Experience with operational management., budget planning, and stakeholder and resource management preferred.
  • Prior experience in building external connections with peers, emerging technology communities, and expert networks preferred.
  • Experience driving research objectives across area through collaboration with internal and external stakeholders preferred.
  • Proven performance in earlier role/comparable role.

Desired Experience
  • Ph.D. in physical sciences (physics, biology, computer science, etc.) with 10 years post-graduate experience.
  • Strong publication record demonstrating the power of single-molecule research to solve important questions in biology and/or medicine.
  • Experience building and maintaining custom single-molecule platforms.
  • Software engineering experience with MATLAB, Python, LabVIEW, and C++. Experience with version control and issue tracking with GitHub.

Better at Work. Better at Life.
When you work at St. Jude, you'll join a highly collaborative work culture that inspires you every day to be your best. With opportunities for learning and growth, you can shape a career path that is right for you while also enjoying all the benefits and stability of working for a world-class institution. This includes work-life balance with generous paid time-off and on-campus conveniences that make life a little easier. Join us and you'll quickly see why St. Jude is consistently ranked by our employees on Glassdoor as a "Best Place to Work."
Benefits
Your health and well-being are important to us. That's why St. Jude Children's Research Hospital provides employees with high-quality benefits choices.
We are committed to ensuring our benefits are competitive and affordable. St. Jude continues to cover medical premiums for employees and offers low additional costs for dependents.
View all the benefits offered including Medical & Prescription Drug Plans, Dental Plan, Vision Plan, Financial Security, Retirement Plan, Living Well - Employee Wellness Program, Time Off Programs, Educational Benefits, Family Friendly Benefits, and Benefits Unique to St. Jude.
Have More in Memphis
Get the best of big-city amenities mixed with all the charm of a small-town feel when you live in Memphis. From our world-renowned music scene to our eclectic mix of food and people. Memphis is a place our employees are proud to call home. Our region enjoys a cost of living more than 20% lower than the national average and our state places no personal income tax on wages. Plus, Memphians spend five hours less per year in their daily commute compared to the national average. Learn how you can "Have More in Memphis."
Compensation
In recognition of certain U.S. state and municipal pay transparency laws, St. Jude is including a reasonable estimate of the compensation range for this role. This is an estimate offered in good faith and a specific salary offer takes into account factors that are considered in making compensation decisions including but not limited to skill sets, experience and training, licensure and certifications, and other business and organizational needs. It is not typical for an individual to be hired at or near the top of the salary range and compensation decisions are dependent on the facts and circumstances of each case. A reasonable estimate of the current salary range is $125,840 - $238,160 per year for the role of Director of Scientific Research, Single-molecule Imaging Center.
Explore our exceptional benefits!
St. Jude is an Equal Opportunity Employer
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St. Jude Children's Research Hospital does not accept unsolicited assistance from search firms for employment opportunities. Please do not call or email. All resumes submitted by search firms to any employee or other representative at St. Jude via email, the internet or in any form and/or method without a valid written search agreement in place and approved by HR will result in no fee being paid in the event the candidate is hired by St. Jude.