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Scientific Software Developer Intern Jobs (NOW HIRING)

... science (especially parallel programming and code optimization), a strong mathematics/physics/engineering background, in-depth knowledge of computer software/hardware architecture, and excellent ...

Intern Software Development

Seattle, WA

$22 - $28.75/hr

Software Developer Intern DeepHealth is seeking a Software Developer Intern for Summer 2026 to join ... Pursuing a BS or MS in Computer Science, Computer Engineering, or related field * Strong foundation ...

The Affinity Group at OpenEye seeks to hire a scientific software developer to join a growing team delivering Molecular Dynamics (MD) based solutions for predicting protein-ligand binding affinities.

Software Developer Intern

Las Vegas, NV ยท On-site

$18 - $23.75/hr

Bachelor's degree in Computer Science, Software Engineering, or related field (or equivalent experience) * Proven experience in software development (typically 2-5+ years) * Proficiency in ...

Software Developer Intern Reports to: Product Development Leader FLSA Status: Non-Exempt Job ... Pursuing a BS or MS in Computer Science, Computer Engineering, or related field * Strong foundation ...

Intern Software Development

Somerville, MA

$21 - $27.50/hr

Software Developer Intern Reports to: Product Development Leader FLSA Status: Non-Exempt Job ... Pursuing a BS or MS in Computer Science, Computer Engineering, or related field * Strong foundation ...

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Scientific Software Developer Intern information

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How much do scientific software developer intern jobs pay per hour?

As of Jun 21, 2026, the average hourly pay for scientific software developer intern in the United States is $22.89, according to ZipRecruiter salary data. Most workers in this role earn between $18.51 and $24.28 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Scientific Software Developer Intern, and why are they important?

To thrive as a Scientific Software Developer Intern, you need a solid background in computer science or a related field, strong programming skills (often in Python, C++, or Java), and familiarity with scientific computing concepts. Experience with version control systems (like Git), scientific libraries (such as NumPy or SciPy), and sometimes knowledge of Linux environments or HPC systems is typically required. Analytical thinking, problem-solving abilities, and effective teamwork are vital soft skills that set candidates apart. These competencies ensure you can efficiently contribute to research-driven software projects, collaborate with scientists, and develop robust scientific applications.

How does a Scientific Software Developer Intern typically collaborate with researchers and other developers during a project?

As a Scientific Software Developer Intern, you will often work closely with research scientists to understand their computational needs and translate those requirements into software solutions. Collaboration usually involves participating in team meetings, clarifying project specifications, and regularly updating progress through code reviews or documentation. You may also pair with experienced developers to learn best practices, troubleshoot issues, and integrate your work with larger codebases. This collaborative environment helps you build both technical and communication skills while ensuring the software meets scientific objectives.

What is the difference between Scientific Software Developer Intern vs Data Scientist Intern?

AspectScientific Software Developer Intern

The Scientific Software Developer Intern typically focuses on developing and maintaining scientific applications, often requiring programming skills in languages like Python, C++, or Fortran, and a background in science or engineering. They work in research labs, academia, or industry settings on data analysis, simulation, or modeling projects.

In contrast, a Data Scientist Intern primarily analyzes large datasets, builds predictive models, and uses statistical tools and machine learning techniques. They often have expertise in Python, R, SQL, and data visualization tools, working in tech companies, finance, or consulting firms.

While both roles involve programming and data handling, the Scientific Software Developer Intern emphasizes scientific computing and simulation, whereas the Data Scientist Intern focuses on data analysis and insights.

What does a Scientific Software Developer Intern do?

A Scientific Software Developer Intern assists in designing, developing, and maintaining software applications used for scientific research and data analysis. They typically work under the guidance of senior developers or scientists, contributing to coding, debugging, and testing software tools. The role often involves collaborating with researchers to understand their computational needs and implementing features that facilitate scientific experiments or simulations. Interns may also be involved in documentation and optimizing existing code for better performance. This position is ideal for students or recent graduates interested in combining software development skills with scientific problem-solving.
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What cities are hiring for Scientific Software Developer Intern jobs? Cities with the most Scientific Software Developer Intern job openings:
What are the most commonly searched types of Scientific Software Developer jobs? The most popular types of Scientific Software Developer jobs are:
What states have the most Scientific Software Developer Intern jobs? States with the most job openings for Scientific Software Developer Intern jobs include:
Infographic showing various Scientific Software Developer Intern job openings in the United States as of June 2026, with employment types broken down into 1% Internship, 96% Full Time, 2% Part Time, and 1% Contract. Highlights an 95% Physical, 2% Hybrid, and 3% Remote job distribution, with an average salary of $47,621 per year, or $22.9 per hour.
Scientific Software Developer - Affinity

Scientific Software Developer - Affinity

OpenEye Scientific

Santa Fe, NM โ€ข On-site

Full-time

Medical, Dental, Vision, Retirement, PTO

Posted 20 days ago


Job description

Over the last eight years, OpenEye Scientific has developed the field's most advanced large-scale compute platform, Orion, built on Amazon Web Services. In this position, you will be working at the cutting edge of cloud computing, C++/Python development, and advanced MD simulation techniques. Your work will have the potential to make a major impact in drug discovery, and will be available to many pharmaceutical and biotech companies.

OpenEye, Cadence Molecular Sciences, an industry leader in computational molecular design, uses a scientific approach to deliver rapid, robust, and scalable software, toolkits, and technology & design services for the advancement of pharmaceuticals, biologics, agrochemicals, and flavors and fragrances. We are passionate about science and about taking care of our team members, with leaders supporting your development and recognizing your contributions by providing an unmatched total compensation package in a collaborative, caring, energetic and fun work environment.

The Affinity Group at OpenEye seeks to hire a scientific software developer to join a growing team delivering Molecular Dynamics (MD) based solutions for predicting protein-ligand binding affinities. Within OpenEye's Cloud-based platform Orion, our team has already delivered to our clients massively parallel Relative Binding Free Energy (RBFE) tools capable of calculating affinities on dozens of ligands in only hours, using hundreds of GPUs. We are also developing faster, higher throughput MD-based prescreening approaches to use upstream of the heavier free energy methods. With your experience in MD and programming, you will help us to extend our capabilities in this area, making both our science and our tools better: more robust, more accurate, and more efficient. The work you do will have a high impact, contributing to the science of many organizations, both industry-based and academic. In this you will be collaborating with experienced scientific developers with expertise in small molecule drug discovery and long track records of delivering useful solutions and liaising with academic collaborators in the simulations community.

Please include a cover letter.

What you should have:

  • PhD. with PostDoc in an area related to structure-based ligand design methods.
  • 3 or more years of experience in scientific programming with Python.
  • 3 or more years of experience with Molecular Dynamics including Free Energy Calculations.
  • Experience in computational chemistry methods development, implementation, and validation
  • Team-oriented with good communication skills and professional scientific presentation skills.
  • Ability and desire to learn new ideas and adapt to new development practices

The following are a PLUS, but not required:

  • Knowledge & skill in programming and professional software development practices & tools
  • Experience with a multi platform and/or distributed computing environment including cloud computing.
  • Knowledge of chemistry and/or drug discovery & development

Benefits:
OpenEye is passionate about the welfare of its employees and offers competitive benefits that include medical, dental, vision, flexible working schedule, 401k retirement plans, paid vacation, paid sick leave, home internet costs, public transportation reimbursement, and much more.

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