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Temporary Bioinformatics Software Engineer Jobs in California

Plasmidsaurus Inc

Bioinformatics Scientist

San Francisco, CA · On-site

$170K - $190K/yr

Position Overview You'll work on the bioinformatics engine powering that impact, wearing many hats ... Is curious about the intersection of biology, algorithms, and software engineering. * Gets excited ...

Roche

Sr. Manager, Bioinformatics

Santa Clara, CA · Hybrid

$170K - $316K/yr

You will lead an elite team of bioinformatics scientists and software engineers to create bespoke, high-impact solutions, resolve sophisticated technical roadblocks, and even engage in collaborative ...

Roche

Sr. Manager, Bioinformatics

San Diego, CA · Hybrid

$170K - $316K/yr

You will lead an elite team of bioinformatics scientists and software engineers to create bespoke, high-impact solutions, resolve sophisticated technical roadblocks, and even engage in collaborative ...

Moffitt

Research Software Engineer

Long Beach, CA

$215K/yr

... and Bioinformatics at the Moffitt Cancer Center. The Goecks Laboratory develops data science ... Work in a dynamic environment and collaborate with software engineers, data scientists, cancer ...

BillionToOne

Quality Engineer, Prenatal

Union City, CA · On-site

$82K - $105K/yr

Lab Operations, Bioinformatics, Process Engineering, Software Engineering, R&D). You will lead the analysis of data to identify improvement initiatives and will execute those process improvements ...

Probably Genetic

Senior Software Engineer

San Francisco, CA · On-site

$150K - $210K/yr

About the Role We are looking for a Senior Software Engineer who will contribute to the design and ... Create APIs, laboratory integrations, bioinformatic tooling, and ML infrastructure using Python ...

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Temporary Bioinformatics Software Engineer information

What is the difference between Temporary Bioinformatics Software Engineer vs Bioinformatics Data Analyst?

AspectTemporary Bioinformatics Software EngineerBioinformatics Data Analyst
CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fieldBachelor's or Master's in Bioinformatics, Biology, or related field
Work EnvironmentProject-based, software development teams, research labsData interpretation, reporting, research teams
Industry UsageBiotech, pharma, research institutionsHealthcare, research, biotech

Temporary Bioinformatics Software Engineers focus on developing and maintaining bioinformatics tools and pipelines, often working in software development environments. Bioinformatics Data Analysts primarily interpret and analyze biological data, providing insights for research or clinical decisions. While both roles require bioinformatics knowledge, their core responsibilities and work settings differ.

What engineers make $500,000?

Senior engineers in specialized fields such as software, petroleum, or aerospace engineering can earn $500,000 or more annually, especially with extensive experience, advanced skills, and leadership roles. High compensation often includes bonuses, stock options, or profit sharing, particularly in large corporations or high-demand industries.

What types of projects and collaborations can a Temporary Bioinformatics Software Engineer expect to be involved in?

As a Temporary Bioinformatics Software Engineer, you will typically work on short-term projects such as developing or maintaining data analysis pipelines, optimizing algorithms for genomic data processing, or integrating software tools with laboratory information management systems. Collaboration is frequent with research scientists, data analysts, and other engineers, often through agile project teams or cross-functional meetings. The fast-paced nature of temporary roles means you’ll need to quickly adapt to new codebases, contribute to ongoing research, and communicate technical findings effectively. This can be a great opportunity to build specialized skills, expand your professional network, and gain exposure to the latest advancements in bioinformatics.

Is bioinformatics a software engineer?

A bioinformatics software engineer is a professional who develops software tools and algorithms to analyze biological data, often requiring programming skills in languages like Python or R. While they work with software development, they specialize in applying computational methods to biological research rather than traditional software engineering roles.

Is bioinformatics a good career in 2026?

Bioinformatics is a growing field with strong demand for software engineers skilled in programming, data analysis, and biological data management. The role of a bioinformatics software engineer offers opportunities in research, healthcare, and biotech industries, often requiring knowledge of tools like Python, R, and Linux. Job prospects are expected to remain favorable due to increasing reliance on computational methods in life sciences.

Is AI going to replace bioinformatics?

AI is a tool that enhances bioinformatics by automating data analysis and pattern recognition, but it is unlikely to fully replace bioinformatics software engineers. These professionals are essential for developing, maintaining, and interpreting complex algorithms and datasets, often requiring expertise in programming, biology, and data science. AI complements their work but does not eliminate the need for human oversight and domain knowledge.

What are the key skills and qualifications needed to thrive as a Temporary Bioinformatics Software Engineer, and why are they important?

To thrive as a Temporary Bioinformatics Software Engineer, you need a solid background in computer science, biology, and programming languages such as Python, R, or Java, often with a degree in bioinformatics or a related field. Familiarity with bioinformatics tools, databases (e.g., BLAST, Ensembl), and experience using version control systems like Git are typically required. Strong analytical thinking, adaptability, and effective communication are crucial for collaborating with multidisciplinary teams and handling changing project needs. These skills enable efficient development and maintenance of software solutions that support complex biological data analysis in a fast-paced, project-driven environment.

What does a Temporary Bioinformatics Software Engineer do?

A Temporary Bioinformatics Software Engineer develops and maintains software tools and applications used in biological and genomic research, typically for a specific short-term project or to cover a staffing gap. They collaborate with scientists to analyze data, automate workflows, and ensure the accuracy of computational methods. Their work often involves writing code, managing databases, and troubleshooting technical issues related to the processing of biological data. Temporary roles usually focus on delivering specific features or supporting research within a defined timeframe.
What are the most commonly searched types of Bioinformatics Software Engineer jobs in California? The most popular types of Bioinformatics Software Engineer jobs in California are:
What are popular job titles related to Temporary Bioinformatics Software Engineer jobs in California? For Temporary Bioinformatics Software Engineer jobs in California, the most frequently searched job titles are:
What job categories do people searching Temporary Bioinformatics Software Engineer jobs in California look for? The top searched job categories for Temporary Bioinformatics Software Engineer jobs in California are:
What cities in California are hiring for Temporary Bioinformatics Software Engineer jobs? Cities in California with the most Temporary Bioinformatics Software Engineer job openings:
Temporary Bioinformatics Software Engineer jobs near you
Bioinformatics Engineer -- T2T Genome Assembly

Bioinformatics Engineer -- T2T Genome Assembly

RD Partners

Foster City, CA • On-site

$81.67/hr

Contractor

Re-posted 15 days ago

Job description

R&D Partners is seeking to hire a Bioinformatics Engineer — T2T Genome Assembly in Foster City, CA.

Your main responsibilities as a Bioinformatics Engineer — T2T Genome Assembly:

·      Plan assembly approaches for non model organisms (data QC, genome profiling, contamination screening, coverage targets) and advise sequencing strategy.

·      Run and iterate long read assemblies and consensus refinement (e.g., hifiasm/Verkko/Flye/Canu; polishing as appropriate) toward chromosome scale, T2T quality results.

·      Resolve haplotypes and complex ploidy/heterozygosity (e.g., trio binning; Hi C/Strand seq assisted phasing) and deliver haplotype resolved assemblies when required.

·      Scaffold and curate assemblies with long range data (e.g., Hi C/Omni C, Strand seq, optical maps): detect/resolve mis joins, close gaps where feasible, and document curation decisions.

·      Benchmark quality and completeness (e.g., k mer spectra/Merqury, BUSCO, QUAST, read mapping), including repeat/centromere/telomere assessments to guide iterative improvements.

What we are looking for in a Bioinformatics Engineer — T2T Genome Assembly:

·      PhD in bioinformatics, computational biology, computer science, or related field.

·      Proven de novo assembly experience on long reads (PacBio HiFi and/or ONT), including tuning and iterative improvement.

·      Assembly QC/validation expertise and ability to diagnose common failure modes in complex genomes.

·      Strong scripting/programming skills (Python and/or Bash) in Linux; solid software engineering practices (Git, testing, documentation).

·      Workflow + compute operations experience: Nextflow/Snakemake/WDL; running large genomics workloads on on prem HPC (e.g., Slurm/LSF) and AWS (e.g., Batch/HealthOmics), with cost aware scaling.

Why Choose R&D Partners?

As an employee, you have access to a comprehensive benefits package including:

  • Medical insurance – PPO, HMO &
  • Dental & Vision insurance
  • 401k plan
  • Employee Assistance Program
  • Long-term disability
  • Weekly payroll
  • Expense reimbursement
  • Online timecard approval

 

Pay Scale:

$135,898 - $169,876 Dependent on Experience)

R&D Partners is a global functional service provider and strategic staffing resource specializing in scientific, clinical research & engineering. We provide job opportunities within major pharmaceutical, biopharmaceutical, biotechnology, and medical device companies.  

R&D Partners is an equal-opportunity employer.   

Company Description

R&D Partners is a national staffing firm focused in the areas of: Scientific, Clinical Research and Engineering. Our team offers well over 200 years of combined staffing experience providing consulting, direct hire & outsourcing solutions with our west coast offices in San Francisco, Redwood City and San Diego, CA and our east coast offices located in Harrisburg, PA and Tampa, FL.
The cornerstone of our success: a knowledgeable and experienced recruiting team.
Our life sciences recruiters, clinical research recruiters and engineering recruiters are uniquely specialized. After a detailed assessment of our clients’ needs, we can then identify appropriate candidates utilizing our established network of professionals. R&D Partners takes a proactive approach to recruiting, establishing relationships with experienced passive candidates so when the time is right, we can combine our candidates’ talents with our clients’ opportunities.