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Trainee Bioinformatics Software Engineer Jobs in California

QIAGEN

Bioinformatics Engineer, QDI

Redwood City, CA · On-site

$130K - $150K/yr

We have developed industry-leading software tools for analysis and reporting of biological data. We ... As a Bioinformatics Engineer in the Content Development team, you will play a critical role in ...

Qiagen

Bioinformatics Engineer, QDI

Redwood City, CA

$130K - $150K/yr

We have developed industry-leading software tools for analysis and reporting of biological data. We ... As a Bioinformatics Engineer in the Content Development team, you will play a critical role in ...

Roche

Principal GPU Software Engineer

Santa Clara, CA

$165K - $308K/yr

As a Bioinformatics Software Engineer, you will design and develop automated verification tests for the bioinformatics components and pipelines that are used in Roche Sequencing products. You will be ...

Inocras Inc

Bioinformatics Engineer

San Diego, CA · On-site

$100K - $140K/yr

Platform & Software Engineering * Re-engineer bioinformatics methods, research prototypes, and AI proofs-of-concept into scalable, production-grade workflows on AWS. * Build and maintain scalable ...

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Trainee Bioinformatics Software Engineer information

What is a trainee bioinformatics software engineer?

A Trainee Bioinformatics Software Engineer is an entry-level professional who assists in developing and maintaining software tools used to analyze biological data, such as DNA sequences or protein structures. They typically work under the supervision of experienced bioinformaticians and software engineers, learning to write code, manage databases, and process complex scientific datasets. The role often requires a mix of programming skills and a basic understanding of biology, allowing trainees to bridge the gap between computational and life sciences. As they gain experience, they contribute more significantly to research projects and the development of new bioinformatics applications.

What are the key skills and qualifications needed to thrive as a trainee bioinformatics software engineer?

To thrive as a Trainee Bioinformatics Software Engineer, you need a strong background in biology, computer science, or a related field, with foundational programming skills in languages like Python or R. Familiarity with bioinformatics tools, databases, and version control systems such as Git is typically required, and coursework or certifications in bioinformatics are advantageous. Analytical thinking, attention to detail, and effective communication are valuable soft skills for collaborating with interdisciplinary teams and interpreting complex data. These competencies enable you to efficiently develop software solutions and contribute to meaningful biological research.

What are some common challenges faced by trainee bioinformatics software engineers when transitioning from academic projects to industry roles?

Trainee Bioinformatics Software Engineers often find the shift from academic to industry settings challenging due to differences in project scope, timelines, and collaborative expectations. In industry, there is a greater emphasis on writing maintainable, well-documented code and following software development best practices, such as version control and code reviews. Additionally, trainees must quickly adapt to working in cross-functional teams that include biologists, data scientists, and senior engineers, requiring strong communication and teamwork skills. Managing competing priorities and meeting strict deadlines can also be a new experience compared to the typically flexible timelines of academic research.

What is the difference between Trainee Bioinformatics Software Engineer vs Junior Bioinformatics Developer?

AspectTrainee Bioinformatics Software EngineerJunior Bioinformatics Developer
Required CredentialsTypically a recent graduate or in early training, with a degree in bioinformatics, computer science, or related fieldsSimilar educational background, often entry-level or with minimal professional experience
Work EnvironmentTraining programs, internships, or entry-level projects within research labs or biotech companiesEntry-level roles in research teams or biotech firms, focusing on developing bioinformatics tools
Employer & Industry UsageUsed by companies and research institutions to train new talent in bioinformatics software developmentCommonly employed in biotech, pharma, and research organizations for initial software development tasks

The main difference is that a Trainee Bioinformatics Software Engineer is in a training or internship phase, focusing on learning and skill development, while a Junior Bioinformatics Developer is an entry-level professional actively contributing to projects. Both roles require similar educational backgrounds but differ in experience level and responsibilities.

What are the most commonly searched types of Bioinformatics Software Engineer jobs in California?

The most popular types of Bioinformatics Software Engineer jobs in California are:

What are popular job titles related to Trainee Bioinformatics Software Engineer jobs in California?

For Trainee Bioinformatics Software Engineer jobs in California, the most frequently searched job titles are:

What job categories do people searching Trainee Bioinformatics Software Engineer jobs in California look for?

The top searched job categories for Trainee Bioinformatics Software Engineer jobs in California are:

What cities in California are hiring for Trainee Bioinformatics Software Engineer jobs?

Cities in California with the most Trainee Bioinformatics Software Engineer job openings:

Trainee Bioinformatics Software Engineer jobs near you

Bioinformatics Software Engineer

South San Francisco, CA • On-site

Artech Information System LLC
Recruiting and Staffing Services • 10K+ employees
Learn more about Artech Information System LLCexternal

Full-time

Re-posted 9 days ago

Job description

Company Description

Artech is the 10th Largest IT Staffing Company in the US, according to Staffing Industry Analysts' 2012 annual report. Artech provides technical expertise to fill gaps in clients' immediate skill-sets availability, deliver emerging technology skill-sets, refresh existing skill base, allow for flexibility in project planning and execution phases, and provide budgeting/financial flexibility by offering contingent labor as a variable cost.

Job Description

Job Title: Bioinformatics Software Engineer

Location: South San Francisco, CA

Duration: 11+ Months
Position Type: Contract

Duties:

  • We have a full-time temporary contractor opening (11 months) for an experienced software engineer in the Ion AmpliSeq Designer team.
  • The individual will focus on developing a brand new API web-service to enable third-party integrations with the AmpliSeq Designer software.
  • The individual will design and implement the core service and related authentication aspects, notifications, versioning, as well as work on deployment & scaling in a cloud-hosted environment.
  • The successful candidate will be part of an innovative multi-disciplinary team developing applications for Ion Torrent DNA sequencing.
  • As part of this team, they will be expected to work in a fast paced, complex setting to hard deliverables in a collaborative environment.
  • Critical thinking, determination to succeed, the willingness and courage to push the boundaries on the possible and the drive to deliver are key attributes.

Primary responsibilities include:

  • Design, develop, and test API web-services to enable third party integrations of AmpliSeq Designer functionality.
  • Integrate such API with existing backend data analysis pipelines and databases.
  • Document and maintain API specifications, coordinate with clients of the API.
  • Handle authentication, status notifications, versioning and related aspects.
  • Develop automation tools and scripts to aid testing of the API using real and mock data.
  • Collaborate with a team of software developers and bioinformatics scientists to deliver software features in release cycles (in an agile development process).

Requirements:

  • Experience with multiple complete product development life cycles from concept to development and product testing and final release.
  • Excellent communication and organization skills.
  • Proven expertise with Java and web-service frameworks like Play, DropWizard, etc.
  • Experience with designing APIs, building REST-ful webservices, working with SQL databases.
  • Proven expertise with Perl, Python, or UNIX scripting.
  • Bioinformatics background knowledge (genomics, molecular biology) and skills (NGS, assay design, tools, file-formats etc.) are a strong plus.
  • Prefer experience with cloud computing, AWS, docker, scaling.
Additional Information

Vishnu Kumar

Technical Recruiter 

Artech Information Systems LLC 

360 Mt. Kemble Avenue, Suite 2000 | Morristown, NJ 07960 

Office: +1.973.967.3585 | Fax: 973.998.2599

Artech logo

About Artech

Sourced by ZipRecruiter

Artech is a leading IT staffing and consulting company based in Morristown, NJ, US. Since its foundation in 1992, Artech has mastered in complementing human expertise with technology and business acumen to produce world-class staffing solutions. The company caters to diverse industry sectors, including financial services, healthcare, telecommunication, energy and utilities, supply chain, and retail. It provides IT consulting, project management, professional and staff augmentation, and managed staffing services. Artech's mission is to provide exceptional IT staffing services to its clients by comprehending their business needs and then crafting a customized staffing strategy. Its notable achievement includes being recognized as one of the largest IT staffing companies in the U.S, according to Staffing Industry Analysts (SIA).

Industry

Recruiting and staffing services

Company size

10,000+ Employees

Headquarters location

Morristown, NJ, US

Year founded

1992

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