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Trainee Bioinformatics Software Engineer Jobs in California

As a Bioinformatics Engineer, you will develop software for analyzing and visualizing complex biological data while collaborating with Front-End and Cloud Infrastructure Engineering teams.

Software Engineer II

Emeryville, CA

$112K - $154K/yr

Software Engineer II RESEARCH AND DEVELOPMENT - BIOINFORMATICS AND SOFTWARE ENGINEERING We are seeking talented, curious, and self-motivated software engineers to help build the most advanced ...

Research Software Engineer

Long Beach, CA · On-site

$215K/yr

... and Bioinformatics at the Moffitt Cancer Center. The Goecks Laboratory develops data science ... Work in a dynamic environment and collaborate with software engineers, data scientists, cancer ...

Quality Engineer, Prenatal

Union City, CA · On-site

$82K - $105K/yr

Lab Operations, Bioinformatics, Process Engineering, Software Engineering, R&D). You will lead the analysis of data to identify improvement initiatives and will execute those process improvements ...

Showing results 21-40

Trainee Bioinformatics Software Engineer information

What are some common challenges faced by trainee bioinformatics software engineers when transitioning from academic projects to industry roles?

Trainee Bioinformatics Software Engineers often find the shift from academic to industry settings challenging due to differences in project scope, timelines, and collaborative expectations. In industry, there is a greater emphasis on writing maintainable, well-documented code and following software development best practices, such as version control and code reviews. Additionally, trainees must quickly adapt to working in cross-functional teams that include biologists, data scientists, and senior engineers, requiring strong communication and teamwork skills. Managing competing priorities and meeting strict deadlines can also be a new experience compared to the typically flexible timelines of academic research.

What is a trainee bioinformatics software engineer?

A Trainee Bioinformatics Software Engineer is an entry-level professional who assists in developing and maintaining software tools used to analyze biological data, such as DNA sequences or protein structures. They typically work under the supervision of experienced bioinformaticians and software engineers, learning to write code, manage databases, and process complex scientific datasets. The role often requires a mix of programming skills and a basic understanding of biology, allowing trainees to bridge the gap between computational and life sciences. As they gain experience, they contribute more significantly to research projects and the development of new bioinformatics applications.

What are the key skills and qualifications needed to thrive as a trainee bioinformatics software engineer?

To thrive as a Trainee Bioinformatics Software Engineer, you need a strong background in biology, computer science, or a related field, with foundational programming skills in languages like Python or R. Familiarity with bioinformatics tools, databases, and version control systems such as Git is typically required, and coursework or certifications in bioinformatics are advantageous. Analytical thinking, attention to detail, and effective communication are valuable soft skills for collaborating with interdisciplinary teams and interpreting complex data. These competencies enable you to efficiently develop software solutions and contribute to meaningful biological research.

What is the difference between Trainee Bioinformatics Software Engineer vs Junior Bioinformatics Developer?

AspectTrainee Bioinformatics Software EngineerJunior Bioinformatics Developer
Required CredentialsTypically a recent graduate or in early training, with a degree in bioinformatics, computer science, or related fieldsSimilar educational background, often entry-level or with minimal professional experience
Work EnvironmentTraining programs, internships, or entry-level projects within research labs or biotech companiesEntry-level roles in research teams or biotech firms, focusing on developing bioinformatics tools
Employer & Industry UsageUsed by companies and research institutions to train new talent in bioinformatics software developmentCommonly employed in biotech, pharma, and research organizations for initial software development tasks

The main difference is that a Trainee Bioinformatics Software Engineer is in a training or internship phase, focusing on learning and skill development, while a Junior Bioinformatics Developer is an entry-level professional actively contributing to projects. Both roles require similar educational backgrounds but differ in experience level and responsibilities.

What are the most commonly searched types of Bioinformatics Software Engineer jobs in California? The most popular types of Bioinformatics Software Engineer jobs in California are:
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What cities in California are hiring for Trainee Bioinformatics Software Engineer jobs? Cities in California with the most Trainee Bioinformatics Software Engineer job openings:

Bioinformatics Engineer

ROSALIND

San Diego, CA • On-site

Full-time

Re-posted 13 days ago


Job description

Job Summary:
ROSALIND empowers Scientists globally to discover life’s unknowns through genomic data interpretation. As a Bioinformatics Engineer, you will develop software for analyzing and visualizing complex biological data while collaborating with Front-End and Cloud Infrastructure Engineering teams.
Responsibilities:
• Build robust and scalable pipelines using ROSALIND workflow language
• Facilitate the development of vivid user interfaces that breakdown the typical complexity of bioinformatics analysis
• Write production-quality end-points to interface bioinformatics pipelines and machine learning algorithms for implementation within the ROSALIND multi-tenant SaaS platform
• Be flexible and passionate about bioinformatics alchemy to support greater discovery into biology’s unknowns through integrative analysis
Qualifications:
Required:
• 5–10 years experience of active development
• PhD (or Master’s degree with 2-5 years industry experience) in Bioinformatics, Computational Biology, Biostatistics, Computer Science or a related field
• Proficiency in using R with strong programming and scripting
• Proficiency with Python
• Experienced in implementing REST and REST-like APIs
• Experience with statistical and mathematical modeling with genomic data
• Experience with building / supporting / using bioinformatic pipelines
• Work collaboratively with other bioinformatics and research scientists and engineers for various projects as appropriate
Preferred:
• Machine learning experience and mathematical understanding of optimization algorithms, Bayesian statistics and multivariate analysis
• Experience with version control systems (e.g., GitHub)
• Experience building responsive web applications with Angular / JavaScript (Typescript), HTML, CSS
• Proficient in creating D3 visualizations and Canvas on complex data sets
• Worked on a team that has deployed a production web application with a user base of over 200 users
Company:
Rosalind is a Multi-Tenant SaaS Platform for Translational & Regenerative Medicine, Diagnostic Monitoring & BioBank Data Management. Founded in 2013, the company is headquartered in San Diego, USA, with a team of 51-200 employees. The company is currently Growth Stage.