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Temporary Bioinformatics Software Engineer Jobs in San Rafael, CA

The Rockridge Group

Software Engineer II

Emeryville, CA · On-site

$112K - $154K/yr

Software Engineer II RESEARCH AND DEVELOPMENT - BIOINFORMATICS AND SOFTWARE ENGINEERING We are seeking talented, curious, and self-motivated software engineers to help build the most advanced ...

Probably Genetic

Senior Software Engineer

San Francisco, CA · On-site

$150K - $210K/yr

About the Role We are looking for a Senior Software Engineer who will contribute to the design and ... Create APIs, laboratory integrations, bioinformatic tooling, and ML infrastructure using Python ...

Mithrl

Bioinformatics Engineer, Pipelines

San Francisco, CA · On-site

$150K - $200K/yr

ABOUT THE ROLE We are looking for a Lead Bioinformatics Pipeline Engineer to build and scale Mithrl ... Previous work in a tech bio startup, biotech R&D group, or scientific software company WHAT YOU ...

Natera

Principal Software Engineer

South San Francisco, CA · On-site

$162K - $217K/yr

Principal Software Engineer Location: South San Francisco, CA preferred; Remote optional Job Type ... or bioinformatics computing, LIMS or laboratory data systems, workflow orchestration engines ...

Natera

Principal Software Engineer

South San Francisco, CA · Remote

$162K - $217K/yr

Principal Software Engineer Location: South San Francisco, CA preferred; Remote optional Job Type ... or bioinformatics computing, LIMS or laboratory data systems, workflow orchestration engines ...

Mithrl

Bioinformatics Engineer, Pipelines

San Francisco, CA · On-site

$150K - $200K/yr

ABOUT THE ROLE We are looking for a Lead Bioinformatics Pipeline Engineer to build and scale Mithrl ... Previous work in a tech bio startup, biotech R&D group, or scientific software company WHAT YOU ...

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All JobsBioinformatics Software Engineer JobsTemporary Bioinformatics Software Engineer JobsTemporary Bioinformatics Software Engineer Jobs in San Rafael, CA

Temporary Bioinformatics Software Engineer information

See San Rafael, CA salary details

$47.9K

$146.1K

$265.9K

How much do temporary bioinformatics software engineer jobs pay per year?

As of Aug 24, 2026, the average yearly pay for temporary bioinformatics software engineer in San Rafael, CA is $146,086.00, according to ZipRecruiter salary data. Most workers in this role earn between $107,000.00 and $175,000.00 per year, depending on experience, location, and employer.

What does a temporary bioinformatics software engineer do?

A Temporary Bioinformatics Software Engineer develops and maintains software tools and applications used in biological and genomic research, typically for a specific short-term project or to cover a staffing gap. They collaborate with scientists to analyze data, automate workflows, and ensure the accuracy of computational methods. Their work often involves writing code, managing databases, and troubleshooting technical issues related to the processing of biological data. Temporary roles usually focus on delivering specific features or supporting research within a defined timeframe.

What types of projects and collaborations can a temporary bioinformatics software engineer expect to be involved in?

As a Temporary Bioinformatics Software Engineer, you will typically work on short-term projects such as developing or maintaining data analysis pipelines, optimizing algorithms for genomic data processing, or integrating software tools with laboratory information management systems. Collaboration is frequent with research scientists, data analysts, and other engineers, often through agile project teams or cross-functional meetings. The fast-paced nature of temporary roles means you’ll need to quickly adapt to new codebases, contribute to ongoing research, and communicate technical findings effectively. This can be a great opportunity to build specialized skills, expand your professional network, and gain exposure to the latest advancements in bioinformatics.

What are the key skills and qualifications needed to thrive as a temporary bioinformatics software engineer, and why are they important?

To thrive as a Temporary Bioinformatics Software Engineer, you need a solid background in computer science, biology, and programming languages such as Python, R, or Java, often with a degree in bioinformatics or a related field. Familiarity with bioinformatics tools, databases (e.g., BLAST, Ensembl), and experience using version control systems like Git are typically required. Strong analytical thinking, adaptability, and effective communication are crucial for collaborating with multidisciplinary teams and handling changing project needs. These skills enable efficient development and maintenance of software solutions that support complex biological data analysis in a fast-paced, project-driven environment.

What is the difference between Temporary Bioinformatics Software Engineer vs Bioinformatics Data Analyst?

AspectTemporary Bioinformatics Software EngineerBioinformatics Data Analyst
CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fieldBachelor's or Master's in Bioinformatics, Biology, or related field
Work EnvironmentProject-based, software development teams, research labsData interpretation, reporting, research teams
Industry UsageBiotech, pharma, research institutionsHealthcare, research, biotech

Temporary Bioinformatics Software Engineers focus on developing and maintaining bioinformatics tools and pipelines, often working in software development environments. Bioinformatics Data Analysts primarily interpret and analyze biological data, providing insights for research or clinical decisions. While both roles require bioinformatics knowledge, their core responsibilities and work settings differ.

What cities near San Rafael, CA are hiring for Temporary Bioinformatics Software Engineer jobs?

Cities near San Rafael, CA with the most Temporary Bioinformatics Software Engineer job openings:

Temporary Bioinformatics Software Engineer jobs near you

Bioinformatics Software Engineer

Artech Information System LLC

South San Francisco, CA • On-site

Full-time

Re-posted 5 days ago

Job description

Company Description

Artech is the 10th Largest IT Staffing Company in the US, according to Staffing Industry Analysts' 2012 annual report. Artech provides technical expertise to fill gaps in clients' immediate skill-sets availability, deliver emerging technology skill-sets, refresh existing skill base, allow for flexibility in project planning and execution phases, and provide budgeting/financial flexibility by offering contingent labor as a variable cost.

Job Description

Job Title: Bioinformatics Software Engineer

Location: South San Francisco, CA

Duration: 11+ Months
Position Type: Contract

Duties:

  • We have a full-time temporary contractor opening (11 months) for an experienced software engineer in the Ion AmpliSeq Designer team.
  • The individual will focus on developing a brand new API web-service to enable third-party integrations with the AmpliSeq Designer software.
  • The individual will design and implement the core service and related authentication aspects, notifications, versioning, as well as work on deployment & scaling in a cloud-hosted environment.
  • The successful candidate will be part of an innovative multi-disciplinary team developing applications for Ion Torrent DNA sequencing.
  • As part of this team, they will be expected to work in a fast paced, complex setting to hard deliverables in a collaborative environment.
  • Critical thinking, determination to succeed, the willingness and courage to push the boundaries on the possible and the drive to deliver are key attributes.

Primary responsibilities include:

  • Design, develop, and test API web-services to enable third party integrations of AmpliSeq Designer functionality.
  • Integrate such API with existing backend data analysis pipelines and databases.
  • Document and maintain API specifications, coordinate with clients of the API.
  • Handle authentication, status notifications, versioning and related aspects.
  • Develop automation tools and scripts to aid testing of the API using real and mock data.
  • Collaborate with a team of software developers and bioinformatics scientists to deliver software features in release cycles (in an agile development process).

Requirements:

  • Experience with multiple complete product development life cycles from concept to development and product testing and final release.
  • Excellent communication and organization skills.
  • Proven expertise with Java and web-service frameworks like Play, DropWizard, etc.
  • Experience with designing APIs, building REST-ful webservices, working with SQL databases.
  • Proven expertise with Perl, Python, or UNIX scripting.
  • Bioinformatics background knowledge (genomics, molecular biology) and skills (NGS, assay design, tools, file-formats etc.) are a strong plus.
  • Prefer experience with cloud computing, AWS, docker, scaling.
Additional Information

Vishnu Kumar

Technical Recruiter 

Artech Information Systems LLC 

360 Mt. Kemble Avenue, Suite 2000 | Morristown, NJ 07960 

Office: +1.973.967.3585 | Fax: 973.998.2599

Artech logo

About Artech

Sourced by ZipRecruiter

Artech is a leading IT staffing and consulting company based in Morristown, NJ, US. Since its foundation in 1992, Artech has mastered in complementing human expertise with technology and business acumen to produce world-class staffing solutions. The company caters to diverse industry sectors, including financial services, healthcare, telecommunication, energy and utilities, supply chain, and retail. It provides IT consulting, project management, professional and staff augmentation, and managed staffing services. Artech's mission is to provide exceptional IT staffing services to its clients by comprehending their business needs and then crafting a customized staffing strategy. Its notable achievement includes being recognized as one of the largest IT staffing companies in the U.S, according to Staffing Industry Analysts (SIA).

Industry

Recruiting and staffing services

Company size

10,000+ Employees

Headquarters location

Morristown, NJ, US

Year founded

1992

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