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Software Engineer Biology Jobs (NOW HIRING)

CoSourcing Partners

Sr Software Engineer

New York, NY

$134K - $176.70K/yr

Job Title: Sr Software Engineer Duration: 6-12 months Location: NYC or San Francisco, CA Job Type ... They build and deploy software and biological AI systems to safeguard humanity. The same AI ...

Co-Sourcing Partners

Sr Software Engineer

New York, NY · On-site

$134K - $176.70K/yr

Job Title: Sr Software Engineer Duration: 6-12 months Location: NYC or San Francisco, CA Job Type ... They build and deploy software and biological AI systems to safeguard humanity. The same AI ...

Asimov

Staff Software Engineer

Boston, MA · Remote

$179K - $230K/yr

We're developing a mammalian synthetic biology platform--from cells to software--to enable the design and manufacture of next-generation therapeutics. What would software engineering be like without ...

Asimov, Inc

Staff Software Engineer

Boston, MA · On-site

$179K - $230K/yr

We're developing a mammalian synthetic biology platform--from cells to software--to enable the design and manufacture of next-generation therapeutics. What would software engineering be like without ...

bioMerieux

Sr. Software Engineer

Hazelwood, MO

$115.50K - $152.30K/yr

Bachelor's degree in Computer Science, Data Engineering, Software Engineering, Biology, Microbiology, Clinical Laboratory Science, Biomedical Engineering, or a related technical or scientific field ...

Stellaromics Inc.

Staff Software Engineer

Boston, MA · On-site

... Biology to integrate panel design algorithms. • Work with UX team to design and develop a ... a Staff Software Engineer developing across web, database, cloud and service layer. • ...

Stellaromics, Inc.

Staff Software Engineer

Boston, MA · On-site

$155K - $180K/yr

Role Description The Staff Software Engineer will work cross functionally with the Computational Biology, Assay, Manufacturing and Commercial teams to define and develop the software pipeline for our ...

Roberts Recruiting

Software Engineer

Cambridge, MA

Job Purpose We are seeking a software engineer who is passionate about solving data processing ... biological and clinical collaborators. Responsibilities * Develop and maintain software packages ...

MIT Lincoln Laboratory

Software Engineer

Lexington, MA · On-site

... highly motivated software engineer to support several projects within our group, including ... Experience with biological and medical data a plus Recent Graduate Hiring Range:$116,400 - $140,000 ...

New York University

Software Engineer

New York, NY · On-site

$100K - $250K/yr

... astrophysics, biology, neuroscience and quantum computing. The selected candidates will work ... The Software Engineer will report to Shirley Ho, Senior Research Scientist and is a full-time fixed ...

MIT Lincoln Laboratory

Software Engineer

Lexington, MA · On-site

... highly motivated software engineer to support several projects within our group, including ... Experience with biological and medical data a plus Recent Graduate Hiring Range: $116,400 - $140 ...

Watershed Informatics

Software Engineer

Boston, MA

The future of biology is in big data analysis, and we are on a mission to accelerate digital drug ... single software platform. We have attracted some of the best bioinformatics, engineering, and ...

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All JobsSoftware Engineer Biology Jobs

Software Engineer Biology information

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$63.5K

$147.5K

$205.5K

How much do software engineer biology jobs pay per year?

As of May 30, 2026, the average yearly pay for software engineer biology in the United States is $147,524.00, according to ZipRecruiter salary data. Most workers in this role earn between $120,000.00 and $173,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Software Engineer in Biology, and why are they important?

To thrive as a Software Engineer in Biology, you need a solid background in computer science, proficiency in at least one programming language (such as Python or R), and a foundational understanding of biological concepts or bioinformatics. Familiarity with bioinformatics databases, genomic data analysis tools, and version control systems like Git is typically required, along with relevant certifications or coursework. Strong problem-solving abilities, effective communication, and an aptitude for interdisciplinary collaboration help you stand out in this field. These skills are crucial to efficiently develop and maintain software solutions that address complex biological research challenges and foster innovation within life sciences teams.

How do software engineers specializing in biology typically collaborate with biologists and researchers on projects?

Software engineers in biology often work closely with multidisciplinary teams, including biologists, data scientists, and laboratory researchers. They play a crucial role in translating biological questions into computational problems, designing tools, and developing software pipelines that enable efficient data analysis and visualization. Regular meetings, code reviews, and collaborative problem-solving sessions are common, ensuring that technical solutions align with scientific goals. This teamwork not only enhances the quality of research but also provides valuable opportunities for software engineers to deepen their domain knowledge and grow professionally.

What are Software Engineer Biology professionals?

Software Engineer Biology professionals are specialists who combine software engineering skills with a strong understanding of biological sciences. They develop software tools, algorithms, and data analysis pipelines to help researchers analyze biological data, such as genetic sequences or protein structures. Their work is essential in fields like bioinformatics, computational biology, and biotechnology, where large-scale data processing is needed. By bridging the gap between biology and technology, they support scientific discoveries and the development of new medical treatments.

What is the difference between Software Engineer Biology vs Bioinformatics Software Engineer?

AspectSoftware Engineer BiologyBioinformatics Software Engineer
Required CredentialsBachelor's or Master's in Biology, Computer Science, or related fieldsBachelor's or Master's in Bioinformatics, Computer Science, or related fields
Work EnvironmentResearch labs, biotech companies, healthcare institutionsResearch institutions, biotech firms, healthcare tech companies
Industry UsageDevelops software for biological research, healthcare applicationsCreates algorithms and tools for biological data analysis
Common Search/ComparisonSoftware Engineer Biology vs Bioinformatics Software Engineer

Both roles involve software development in biological contexts, but Software Engineer Biology focuses on creating applications for biological research and healthcare, while Bioinformatics Software Engineers specialize in analyzing biological data using algorithms and computational tools. The credentials and work environments overlap significantly, making them closely related but distinct career paths.

More about Software Engineer Biology jobs
What cities are hiring for Software Engineer Biology jobs? Cities with the most Software Engineer Biology job openings:
What states have the most Software Engineer Biology jobs? States with the most job openings for Software Engineer Biology jobs include:
What job categories do people searching Software Engineer Biology jobs look for? The top searched job categories for Software Engineer Biology jobs are:
Software Engineer Biology jobs near you
Infographic showing various Software Engineer Biology job openings in the United States as of May 2026, with employment types broken down into 87% Full Time, 9% Part Time, and 4% Contract. Highlights an 94% Physical, 5% Hybrid, and 1% Remote job distribution, with an average salary of $147,524 per year, or $70.9 per hour.
Senior Software Engineer & Project Lead, Biology

Senior Software Engineer & Project Lead, Biology

Simons Foundation

New York, NY • On-site

$190K - $235K/yr

Full-time

Posted 23 days ago

Job description

POSITION SUMMARY
The Center for Computational Biology is seeking an experienced software engineer to be the Project Lead for HumanBase (hb.flatironinstitute.org), a dynamic and interactive web-based platform that supports thousands of biomedical researchers in exploring the molecular mechanisms of human disease. This position is ideal for an experienced engineering leader with bioinformatics experience who thrives on solving complex problems at the intersection of large-scale data, advanced analytics, and scientific discovery. This is a high-impact role that directly advances the study of human genomics and disease.
The successful candidate will lead technical direction and execution, guide other software engineers, and collaborate closely with researchers at the Center for Computational Biology to translate cutting-edge computational biology into robust software tools. The Project Lead will be a hands-on engineering leader with experience in biological data and -omics technology, as well as a complementary skillset that includes both writing high-quality code and managing a small team of software engineers. Success in this role depends on the ability to translate biological questions into computational solutions, collaborate closely with internal scientific stakeholders, and drive technically rigorous projects that advance our understanding of human biology.
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
  • Serve as technical lead for HumanBase, guiding the design, architecture, and implementation of new features and major infrastructure upgrades
  • Lead and mentor a team of full stack software engineers, ensuring high-quality code, efficient workflows, and continuous professional development
  • Plan, develop, and optimize scalable genomics data processing pipelines
  • Integrate machine learning methods into production pipelines to analyze heterogeneous biological datasets
  • Establish and enforce software engineering best practices, including coding standards, version control, documentation, testing, and deployment workflows
  • Collaborate cross-functionally with computational biologists, data scientists, and external partners to align engineering efforts with scientific goals
  • Stay current with emerging technologies in cloud infrastructure, bioinformatics, and scientific computing and assess their relevance for HumanBase
  • Perform additional duties or projects as assigned

MINIMUM QUALIFICATIONS
Education
  • B.S. in Computer Science, Software Engineering, or a related technical field

Experience
  • At least 10 years of professional software experience in software engineering, including leading teams and direct involvement in the planning, design, and development of software
  • Experience collaborating daily with other key team members of different technical and scientific backgrounds
  • Proficiency in full stack software development
  • Extensive experience in Python, including developing data pipelines and software libraries
  • Demonstrated experience with the full software development lifecycle (SDLC), including testing, CI/CD, version control, and deployment
  • Experience building and maintaining web-based interfaces and applications
  • Background in computational biology, bioinformatics, or a related field, with experience developing software in support of biological research
  • Experience working with large, heterogeneous biological datasets-ideally in genomics or biomedical contexts

Related Skills & Other Requirements
  • Effective technical leadership and mentorship abilities
  • Excellent communication skills, especially when working across disciplinary boundaries
  • Deep curiosity about science and a passion for building tools that empower scientific discovery
  • Strong sense of ownership and drive for continuous improvement

COMPENSATION
  • The range for full-time annual compensation for this position is $190,000-$235,000 based on experience.
  • In addition to competitive salaries, the Simons Foundation provides employees with an outstanding benefits package.

REQUIRED APPLICATION MATERIALS
  • Please submit a résumé and cover letter stating your interest in the position.

Our Commitment to Expanding Pathways to Science & Opportunities for All:
Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds, and experiences. The Simons Foundation is committed to advancing basic science and mathematics to benefit humankind and expand our collective understanding of our world. As part of our mission, we support partners, programs, and initiatives that seek to broaden the scientific community and open pathways to science and mathematics careers.
The Simons Foundation provides equal opportunities to all applicants without regard to race, religion, color, age, sex, pregnancy, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state, and local law.

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