1

Single Cell Spatial Transcriptomics Jobs (NOW HIRING)

... 5K spatial transcriptomics platform Experience with single-cell RNA-seq analysis and integration with spatial data (Seurat, spacexr/RCTD) #UWDeptMedicineJobs Compensation, Benefits and Position ...

Showing results 41-60

Single Cell Spatial Transcriptomics information

See salary details

$12

$21

$30

How much do single cell spatial transcriptomics jobs pay per hour?

As of Aug 7, 2026, the average hourly pay for single cell spatial transcriptomics in the United States is $21.64, according to ZipRecruiter salary data. Most workers in this role earn between $16.83 and $27.16 per hour, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a single cell spatial transcriptomics scientist, and why are they important?

To thrive as a Single Cell Spatial Transcriptomics Scientist, you need a strong background in molecular biology, genomics, and bioinformatics, typically supported by an advanced degree (PhD or MSc) in a relevant field. Familiarity with high-throughput sequencing platforms, spatial transcriptomics technologies (like 10x Genomics Visium or NanoString GeoMx), and data analysis tools such as R or Python is essential. Critical thinking, problem-solving, and effective communication are crucial soft skills for interpreting complex data and collaborating in multidisciplinary teams. These skills and qualities are vital for generating reliable insights into cellular function and spatial organization, which drive innovative research and discovery.

What are the typical challenges faced by professionals working in single cell spatial transcriptomics, and how can they be addressed?

Professionals in Single Cell Spatial Transcriptomics often encounter challenges related to handling large, complex data sets and integrating spatial information with single-cell transcriptomic profiles. These tasks demand strong computational skills and close collaboration with bioinformaticians and other researchers. Effective communication within interdisciplinary teams is essential to ensure experimental design aligns with downstream analysis needs. Staying updated with rapidly evolving technologies and best practices also helps professionals overcome technical hurdles and produce reliable, high-impact results.

What is single cell spatial transcriptomics?

Single cell spatial transcriptomics is a cutting-edge technique that allows researchers to analyze gene expression in individual cells while preserving their spatial location within a tissue. This method combines the high-resolution insights of single-cell RNA sequencing with spatial information, enabling scientists to understand how cells interact and organize within their native environments. It is widely used in biomedical research to study tissue architecture, disease mechanisms, and cellular heterogeneity.
More about Single Cell Spatial Transcriptomics jobs
What cities are hiring for Single Cell Spatial Transcriptomics jobs? Cities with the most Single Cell Spatial Transcriptomics job openings:
What states have the most Single Cell Spatial Transcriptomics jobs? States with the most job openings for Single Cell Spatial Transcriptomics jobs include:
What job categories do people searching Single Cell Spatial Transcriptomics jobs look for? The top searched job categories for Single Cell Spatial Transcriptomics jobs are:
Infographic showing various Single Cell Spatial Transcriptomics job openings in the United States as of August 2026, with employment types broken down into 1% Locum Tenens, 1% As Needed, 78% Full Time, 17% Part Time, and 3% Contract. Highlights an 93% Physical, 2% Hybrid, and 5% Remote job distribution, with an average salary of $45,021 per year, or $21.6 per hour.

Scientist 3 - Translational Medicine - OMNI - Inflammatory Bowel Disease

Genentech

South San Francisco, CA

$100K - $186K/yr

Full-time

Posted 6 days ago


Genentech rating

8.8

Company rating: 8.8 out of 10

Based on 22 frontline employees who took The Breakroom Quiz

11th of 86 rated pharmaceutical


Job description

The Position

Genentech's Translational Medicine OMNI (TM OMNI) Department supports the entire R&D portfolio of novel therapies in Ophthalmology, Metabolism, Neuroscience, Immunology, and Infectious Diseases (OMNI). We develop and implement biomarker strategies to study disease pathways, confirm a therapeutic's mechanism of action, and improve clinical trial efficiency and success. Additionally, we conduct foundational clinical translational research to study the molecular and cellular pathways driving disease to generate novel target and biomarker approaches.

Within Inflammatory Bowel Disease (IBD), we focus on integrating clinical and translational research to understand disease heterogeneity, mucosal immune dysregulation, and mechanisms of tissue damage and repair. We leverage clinical trial data, human biospecimens, and high-dimensional omics technologies to drive biomarker discovery and patient stratification, and enable reverse translation to accelerate therapeutic development.

The Opportunity

As a Scientist 3 in Translational Medicine OMNI, you will play a pivotal role in advancing our research in Inflammatory Bowel Disease (IBD). Positioned at the intersection of wet-lab experimentation and data science, you will collaborate with interdisciplinary teams to identify and validate novel therapeutic targets and biomarkers. In this high-impact role, you will apply human-relevant models and high-dimensional omics data to drive biomarker discovery and enable reverse translation, directly influencing clinical development strategies.

  • Design and perform experimental studies using patient-derived human biospecimens (e.g., intestinal tissue biopsies, blood, stool) to unravel disease mechanisms in IBD.

  • Establish and execute complex human-relevant model systems (including intestinal organoids, primary immune cell co-cultures, and air-liquid interface systems) to investigate pathway biology and therapeutic mechanisms of action.

  • Develop, qualify, and execute custom assays (e.g., multiplex immunoassays, ELISA, flow cytometry, histology) to generate pharmacodynamic and disease-relevant readouts.

  • Analyze and integrate high-dimensional datasets (scRNA-seq, CITE-seq, spatial transcriptomics, proteomics) using R or Python to discover biomarkers and support patient stratification.

  • Support clinical biomarker research strategies by translating laboratory findings into actionable insights for cross-functional clinical development programs.

  • Evaluate and implement emerging technologies and experimental platforms to continually advance our translational research capabilities in IBD.

  • Collaborate closely with cross-functional partners across Research, Bioanalytical Sciences, Biostatistics, Computational Sciences, and Clinical Development to present findings and drive project goals.

Who you are
  • Education: PhD with post-doctoral experience in Immunology, Cell/Molecular Biology, Mucosal Biology, Biochemistry, or a related life sciences discipline, backed by a strong peer-reviewed publication record.

  • Experience:Minimum of 3 years of hands-on experience in immunology or mucosal biology, ideally focused on Inflammatory Bowel Disease (IBD) research.

  • Technical Expert:Proven technical expertise in benchtop techniques (flow cytometry, multiplex immunoassays, ELISA, RT-qPCR, histology) and single-cell workflows (scRNA-seq, CITE-seq).

  • Analytical:Proficient in coding with R or Python for analyzing, visualizing, and interpreting large-scale preclinical and clinical omics datasets.

  • Independent Scientist: Demonstrated ability to independently design, execute, and troubleshoot complex scientific studies while managing multiple priorities in a collaborative environment.

Preferred
  • Direct hands-on experience with primary cell isolation from human intestinal tissue.

  • Advanced expertise with complex disease models, including 3D organoid cultures, co-culture systems, air-liquid interface organoids, or microphysiological systems (gut-on-a-chip).

  • Experience using computational tools to directly analyze high-dimensional single-cell, spatial transcriptomics, or proteomics data beyond standard bench generation.

  • Demonstrated track record of effective cross-functional collaboration within a matrixed, interdisciplinary research environment.

  • Willingness to work in an open, highly collaborative environment with flexibility for global business hours as required.

Relocation benefits are not available for this posting

The expected salary range for this position based on the primary location of CA is $100,400.00 - $186,400.00. Actual pay will be determined based on experience, qualifications, geographic location, and other job-related factors permitted by law. A discretionary annual bonus may be available based on individual and Company performance.

This position also qualifies for the benefits detailed at the link provided below.

Benefits

Compensation & Benefits

Global Grade: SE6.

Please note that the global grade displayed is a target global grade for the role and the actual global grade offered to a candidate may vary depending on several factors - including scope and breadth of the role. For further information relating to global grading in Roche please visit the global grading gSite.

Roche is dedicated to ensuring fair and transparent pay practices for its employees. In compliance with state legal requirements, you may notice some of our job postings will now list salary ranges. Please note that the broad ranges are aligned with our global grading framework and, in some cases, may also include geographic differentials.

As you consider making a change within the organization, this can include not only roles and responsibilities, but also an impact to compensation and benefits. Please take time to review Employees on the Move gSite to understand more.

Roche is an equal opportunity employer.

Genentech is an equal opportunity employer. It is our policy and practice to employ, promote, and otherwise treat any and all employees and applicants on the basis of merit, qualifications, and competence. The company's policy prohibits unlawful discrimination, including but not limited to, discrimination on the basis of Protected Veteran status, individuals with disabilities status, and consistent with all federal, state, or local laws.

If you have a disability and need an accommodation in relation to the online application process, please contact us by completing this form Accommodations for Applicants.


What Genentech employees say

Pay

Benefits

Hours and flexibility

Workplace

Get the full story on Breakroom


Genentech logo

About Genentech

Sourced by ZipRecruiter

A member of the Roche Group, Genentech has been at the forefront of the biotechnology industry for more than 40 years, using human genetic information to develop novel medicines for serious and life-threatening diseases. Genentech has multiple therapies on the market for cancer & other serious illnesses. Please take this opportunity to learn about Genentech where we believe that our employees are our most important asset & are dedicated to remaining a great place to work.

Industry

Scientific research and development services

Company size

10,000+ Employees

Headquarters location

South San Francisco, CA, US

Year founded

1976

Social media