ZipRecruiter

Log In

2

Remote Software Engineer Jobs in Rochester, MN (NOW HIRING)

Mayo Clinic

Principal Data Engineer - AI Program

Rochester, MN · On-site +1

$116K - $139K/yr

... and vended software to meet the desired design functionality for products and programs. The ... This is a full-time remote position within the United States. Mayo Clinic will not sponsor or ...

Mayo Clinic

Principal Data Engineer - AI Program

Rochester, MN · On-site +1

$116K - $139K/yr

... and vended software to meet the desired design functionality for products and programs. The ... This is a full-time remote position within the United States. Mayo Clinic will not sponsor or ...

DataAnnotation

QA Engineer - AI Trainer

Rochester, MN · Remote

$50 - $100/hr

Contribute to developing cutting-edge AI systems, while enjoying the flexibility of remote work and ... other engineers -- who are driving real-world impact in AI development. Our platform offers an ...

next page

Showing results 1-20

All JobsSoftware Engineer JobsRemote Software Engineer JobsRemote Software Engineer Jobs in Rochester, MN

Remote Software Engineer information

See Rochester, MN salary details

$62K

$144K

$200.6K

How much do remote software engineer jobs pay per year?

As of Jul 9, 2026, the average yearly pay for remote software engineer in Rochester, MN is $144,024.00, according to ZipRecruiter salary data. Most workers in this role earn between $117,200.00 and $168,900.00 per year, depending on experience, location, and employer.

What are some common challenges faced by remote software engineers, and how can they be effectively managed?

Remote software engineers often encounter challenges such as communication barriers, time zone differences, and maintaining work-life balance. These can be effectively managed by utilizing collaboration tools (like Slack or Zoom), setting clear expectations with team members, and establishing a dedicated workspace. Regular check-ins, asynchronous updates, and proactive communication help ensure everyone stays aligned on project goals. Building strong relationships with colleagues through virtual meetings and team-building activities can also foster a supportive remote work environment.

What are the key skills and qualifications needed to thrive as a Remote Software Engineer, and why are they important?

To thrive as a Remote Software Engineer, you need strong programming skills, proficiency in software development methodologies, and typically a degree in computer science or related field. Familiarity with version control systems like Git, cloud platforms, and project management tools such as Jira is often required. Excellent communication, self-motivation, and time management are crucial soft skills for remote collaboration. These abilities ensure effective development, seamless teamwork, and productivity in a distributed work environment.

What Does a Remote Software Engineer Do?

As a remote software engineer, you work from home to create and develop systems using programming languages and frameworks. As part of your duties, you design and install software solutions by determining specifications and developing code. You also improve software initiatives by reviewing systems and recommending solutions, often virtually guiding clients through the database, network, and computer processes. By collecting and analyzing issues, you can develop solutions for a variety of technical problems. The remote aspect of this job means you can work from anywhere with a reliable internet connection.

What are Remote Software Engineers?

Remote Software Engineers are professionals who design, develop, test, and maintain software applications from locations outside of a traditional office environment. They collaborate with teams and clients using digital communication tools, allowing for flexible work arrangements. Remote Software Engineers require strong technical and communication skills, as well as the ability to manage their own schedules and work independently. This role is ideal for individuals who are self-motivated and comfortable working in a virtual setting.

What is the difference between Remote Software Engineer vs Remote Web Developer?

AspectRemote Software EngineerRemote Web Developer
Required CredentialsBachelor's in CS or related field, coding skillsBachelor's in CS, design, or related field, coding skills
Work EnvironmentCollaborates on software projects, often in teamsFocuses on website and web app development, often in teams
Employer & Industry UsageTech companies, startups, software firmsWeb agencies, tech companies, startups
Search & Comparison IntentOften compared for software development rolesRelated but more focused on web-specific tasks

Remote Software Engineers develop a wide range of software applications, while Remote Web Developers specialize in building websites and web-based applications. Both roles require similar technical skills and often work in similar environments, but their focus areas differ, making this comparison useful for those exploring career options or job opportunities in tech.

More about Remote Software Engineer jobs
What are the most commonly searched types of Software Engineer jobs in Rochester, MN? The most popular types of Software Engineer jobs in Rochester, MN are:
What are popular job titles related to Remote Software Engineer jobs in Rochester, MN? For Remote Software Engineer jobs in Rochester, MN, the most frequently searched job titles are:
What job categories do people searching Remote Software Engineer jobs in Rochester, MN look for? The top searched job categories for Remote Software Engineer jobs in Rochester, MN are:
What cities near Rochester, MN are hiring for Remote Software Engineer jobs? Cities near Rochester, MN with the most Remote Software Engineer job openings:
Remote Software Engineer jobs near you
Infographic showing various Remote Software Engineer job openings in Rochester, MN as of July 2026, with employment types broken down into 92% Full Time, 5% Part Time, and 3% Contract. Highlights an 89% Physical, 3% Hybrid, and 8% Remote job distribution, with an average salary of $144,024 per year, or $69.2 per hour.
Software Engineer - Limited Tenure - Hybrid

Software Engineer - Limited Tenure - Hybrid

Mayo Clinic

Rochester, MN • On-site, Remote

Full-time

Medical, Dental, Vision, Retirement

Posted 16 days ago

Mayo Clinic rating

7.8

Company rating: 7.8 out of 10

Based on 688 frontline employees who took The Breakroom Quiz

105th of 880 rated healthcare providers

Job description

Why Mayo Clinic

Mayo Clinic is top-ranked in more specialties than any other care provider according to U.S. News & World Report. As we work together to put the needs of the patient first, we are also dedicated to our employees, investing in competitive compensation and comprehensive benefit plans - to take care of you and your family, now and in the future. And with continuing education and advancement opportunities at every turn, you can build a long, successful career with Mayo Clinic.

Benefits Highlights
  • Medical: Multiple plan options.
  • Dental: Delta Dental or reimbursement account for flexible coverage.
  • Vision: Affordable plan with national network.
  • Pre-Tax Savings: HSA and FSAs for eligible expenses.
  • Retirement: Competitive retirement package to secure your future.

Responsibilities

Mayo Clinic's Genomics and Emerging Systems Unit is seeking a Software Engineer to design, develop, and maintain .NET-based applications and services that support genomics and clinical workflows.  These systems run in on-premises and cloud environments, including Microsoft Azure and Google Cloud Platform (GCP), and integrate with other enterprise systems through secure APIs and web services. The Software Engineer will build and optimize services that handle complex laboratory workflows, clinical datasets, and high-volume genomic data processing. This includes ensuring services meet performance, reliability, data integrity, and quality requirements as data volumes grow.

The role collaborates closely with cross-functional teams to translate business, clinical, and technical requirements into maintainable software solutions that meet federal regulatory guidelines. Software Engineer responsibilities include designing and implementing services aligned to enterprise architecture, including cloud-ready APIs, data integration pipelines, and secure interoperability layers for systems that primarily support genomic data and laboratory workflows.

The engineer participates in Agile and DevOps practices using tools such as GitHub, Azure DevOps, Azure Pipelines, and CI/CD frameworks. Work may include deployment automation and configuration management for both on-premises and cloud-hosted applications. Development efforts leverage modern .NET technologies, cloud-native patterns, API-first design, and secure coding practices. Responsibilities also include maintaining comprehensive technical documentation, contributing to code reviews, and participating in advanced troubleshooting through log analysis, root cause evaluation, and data/system investigation.


This position requires effective communication with peers, leaders, and clinical partners across the organization. The engineer will develop working knowledge of laboratory genomics workflows, organizational processes, and customer needs while performing technical assignments with moderate guidance and increasing autonomy.
This is a full time, limited tenure, remote position funded for 2 years.  Mayo Clinic will not sponsor or transfer visas for this position including F-1 OPT STEM.


Qualifications

Bachelor's degree in Computer Science/Engineering or related field; Or an Associates' degree in Computer Science/Engineering or related field with an additional 2 years of experience as described below. 

  • Have working knowledge and experience of Software Engineering with a minimum of internships and a minimum of 1 yr. of experience, or 2yrs of experience coding applications or services in a high-level language (C, C++, Golang, Java, C# etc.). 
  • Demonstrated problem solving and time management skills. 
  • Possesses strong technical aptitude for designing and implementing software solutions. 
  • Experience with modern application development frameworks 
  • Knowledge of professional software engineering practices & best practices for the full software development life cycle, including coding standards, code reviews, source control management, build processes, testing, and operations. 
  • Deep hands-on technical expertise, excellent verbal and written communication skills. 
  • Experience with Agile software development techniques. 
     

Preferred qualifications:

  • Experience developing applications in hybrid environments, including on-premises systems, Microsoft Azure, and Google Cloud Platform (GCP).
  • Proficiency with C# .NET and Angular for developing modern application components, APIs, and web-based user experiences.
  • Experience supporting or modernizing legacy Windows desktop applications, including WinForms and/or WPF applications that predate modern cloud-native tooling. Have working knowledge and experience of Software Engineering with a minimum of internships and a minimum of 1 yr. of experience, or 2yrs of experience coding applications or services in a high-level language (C, C++, Golang, Java, C# etc.). 
  • Familiarity with RESTful APIs, microservices, web services, DevOps pipelines, and CI/CD using Azure DevOps, GitHub Actions, Azure Pipelines, or similar tooling.
  • Experience with relational or NoSQL databases, analytics platforms, big-data processing, and/or enterprise data pipelines.
  • Familiarity with AI coding tools and/or specification-driven development.

  • Experience supporting or developing solutions in healthcare, clinical, Bioinformatics or genomics-focused applications is highly desirable.  
    This vacancy is not eligible for sponsorship/we will not sponsor or transfer visas for this position.  Mayo Clinic DOES NOT participate in the F-1 STEM OPT extension program.


     This position is Limited Tenure.  Limited Tenure (LT) means that if you are offered the position and accept it:
         You will be categorized as a regular employee during this tenure, but employment will be terminated at the established end date.
         You commit to stay in this position until the end of the tenure (approximately x months from date of hire) before you become eligible to transfer          to a new position.
         After the completion of the limited tenure assignment, it is your responsibility to secure another role within Mayo through the job vacancy       process or employment will be ended upon the completion of the limited tenure assignment.
     


Exemption Status
Exempt
Compensation Detail
$102,336.00 - $143,270.40 / year
Benefits Eligible
Yes
Schedule
Full Time
Hours/Pay Period
80
Schedule Details
Monday - Friday; 8:00am-5:00pm, CST This is a hybrid position and must be located within 100 miles of a Mayo Clinic campus for occasional on-site expectations based on business needs.
Weekend Schedule
N/A
International Assignment
No
Site Description
Just as our reputation has spread beyond our Minnesota roots, so have our locations. Today, our employees are located at our three major campuses in Phoenix/Scottsdale, Arizona, Jacksonville, Florida, Rochester, Minnesota, and at Mayo Clinic Health System campuses throughout Midwestern communities, and at our international locations. Each Mayo Clinic location is a special place where our employees thrive in both their work and personal lives. Learn more about what each unique Mayo Clinic campus has to offer, and where your best fit is. 

Equal Opportunity

All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, gender identity, sexual orientation, national origin, protected veteran status or disability status. Learn more about the 'EOE is the Law'.  Mayo Clinic participates in E-Verify and may provide the Social Security Administration and, if necessary, the Department of Homeland Security with information from each new employee's Form I-9 to confirm work authorization.

Recruiter
Jackie MckayQualifications:

Bachelor's degree in Computer Science/Engineering or related field; Or an Associates' degree in Computer Science/Engineering or related field with an additional 2 years of experience as described below. 

  • Have working knowledge and experience of Software Engineering with a minimum of internships and a minimum of 1 yr. of experience, or 2yrs of experience coding applications or services in a high-level language (C, C++, Golang, Java, C# etc.). 
  • Demonstrated problem solving and time management skills. 
  • Possesses strong technical aptitude for designing and implementing software solutions. 
  • Experience with modern application development frameworks 
  • Knowledge of professional software engineering practices & best practices for the full software development life cycle, including coding standards, code reviews, source control management, build processes, testing, and operations. 
  • Deep hands-on technical expertise, excellent verbal and written communication skills. 
  • Experience with Agile software development techniques. 
     

Preferred qualifications:

  • Experience developing applications in hybrid environments, including on-premises systems, Microsoft Azure, and Google Cloud Platform (GCP).
  • Proficiency with C# .NET and Angular for developing modern application components, APIs, and web-based user experiences.
  • Experience supporting or modernizing legacy Windows desktop applications, including WinForms and/or WPF applications that predate modern cloud-native tooling. Have working knowledge and experience of Software Engineering with a minimum of internships and a minimum of 1 yr. of experience, or 2yrs of experience coding applications or services in a high-level language (C, C++, Golang, Java, C# etc.). 
  • Familiarity with RESTful APIs, microservices, web services, DevOps pipelines, and CI/CD using Azure DevOps, GitHub Actions, Azure Pipelines, or similar tooling.
  • Experience with relational or NoSQL databases, analytics platforms, big-data processing, and/or enterprise data pipelines.
  • Familiarity with AI coding tools and/or specification-driven development.

  • Experience supporting or developing solutions in healthcare, clinical, Bioinformatics or genomics-focused applications is highly desirable.  
    This vacancy is not eligible for sponsorship/we will not sponsor or transfer visas for this position.  Mayo Clinic DOES NOT participate in the F-1 STEM OPT extension program.


     This position is Limited Tenure.  Limited Tenure (LT) means that if you are offered the position and accept it:
         You will be categorized as a regular employee during this tenure, but employment will be terminated at the established end date.
         You commit to stay in this position until the end of the tenure (approximately x months from date of hire) before you become eligible to transfer          to a new position.
         After the completion of the limited tenure assignment, it is your responsibility to secure another role within Mayo through the job vacancy       process or employment will be ended upon the completion of the limited tenure assignment.
     

What Mayo Clinic employees say

Pay

Benefits

Hours and flexibility

Workplace

Get the full story on Breakroom

Mayo Clinic logo

About Mayo Clinic

Sourced by ZipRecruiter

Mayo Clinic is the largest integrated, not-for-profit medical group practice in the world. We're building the future, one where the best possible care is available to everyone — and more people can heal at home. Our relentless research turns into earlier diagnoses and new cures. That's how we inspire hope in those who need it most. At Mayo Clinic, experts work together to solve the most challenging unmet needs of patients. Our history of innovation dates back almost 150 years, when brothers Will and Charlie Mayo pioneered an integrated, team-based approach to medicine. Today, that trailblazing spirit drives innovations like Mayo Clinic Platform — which powers new technologies to change how care is delivered to all.

Industry

Hospitals

Company size

10,000+ Employees

Headquarters location

Rochester, MN, US

Year founded

1919

View All Mayo Clinic Jobs

Apply