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Remote Non Profit Accounting Jobs in Rochester, NY

Pronexus, LLC

Senior Accountant

Rochester, NY · Remote

$68K - $85K/yr

Senior Accountant *Part-Time or Full-Time, Remote, On-Site, and Hybrid Opportunities Available ... Support nonprofit accounting functions including fund accounting, restricted fund tracking, and ...

Paychex

Sr SEC Accountant

Rochester, NY · On-site +1

$93K - $146K/yr

  • Medical

  • Retirement

  • PTO

Acts as technical accounting resource to other parties, both within and external to Finance, providing technical accounting guidance on specific transactions or scenarios. Partners with others to ...

Paychex

Sr Accountant

Rochester, NY · On-site +1

$56K - $89K/yr

  • Medical

  • Retirement

  • PTO

Generally Accepted Accounting Principles and other relevant professional financial standards, the Senior Accountant handles regular interactions with Senior Management and various other internal and ...

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Remote Non Profit Accounting information

See Rochester, NY salary details

$13

$24

$35

How much do remote non profit accounting jobs pay per hour?

As of Aug 15, 2026, the average hourly pay for remote non profit accounting in Rochester, NY is $24.59, according to ZipRecruiter salary data. Most workers in this role earn between $19.90 and $27.98 per hour, depending on experience, location, and employer.

What is remote non profit accounting?

A Remote Non Profit Accounting job involves managing the financial activities of a nonprofit organization while working remotely. Responsibilities typically include bookkeeping, preparing financial statements, ensuring compliance with nonprofit accounting standards, and managing grants or donations. These roles require knowledge of fund accounting, nonprofit tax regulations, and financial reporting. Remote nonprofit accountants use cloud-based accounting software to track budgets and expenditures while communicating with teams virtually. Strong attention to detail and an understanding of nonprofit financial management are essential for success in this role.

What are the key skills and qualifications needed to thrive in remote non profit accounting?

To thrive in Remote Non Profit Accounting, you need a solid understanding of GAAP, fund accounting, and financial reporting, typically supported by a degree in accounting or finance and relevant experience in the nonprofit sector. Familiarity with accounting software like QuickBooks Nonprofit, Sage Intacct, or Blackbaud, as well as Excel proficiency and possibly a CPA or similar certification, is highly beneficial. Strong organizational skills, attention to detail, and proactive communication are key soft skills for remote collaboration and managing multiple projects. These abilities ensure compliance, secure grant management, and accurate financial oversight, which are crucial for nonprofit organizations’ operational success.

What are some common challenges faced in remote non profit accounting, and how can they be managed?

A common challenge in remote nonprofit accounting is maintaining clear communication and collaboration with program staff, grant managers, and executive leadership while working from different locations. It’s important to establish structured check-ins, leverage cloud-based accounting tools, and adopt organization-wide file-sharing systems to keep everyone aligned. Remote accountants may also face complexities with tracking restricted funds, grant compliance, and multiple funding sources, so strong organization and attention to detail are essential. By building effective workflows and fostering transparent communication, remote nonprofit accountants can efficiently support their organizations' financial health from afar.

What are the most commonly searched types of Non Profit Accounting jobs in Rochester, NY?

The most popular types of Non Profit Accounting jobs in Rochester, NY are:

What are popular job titles related to Remote Non Profit Accounting jobs in Rochester, NY?

For Remote Non Profit Accounting jobs in Rochester, NY, the most frequently searched job titles are:

What job categories do people searching Remote Non Profit Accounting jobs in Rochester, NY look for?

The top searched job categories for Remote Non Profit Accounting jobs in Rochester, NY are:

What cities near Rochester, NY are hiring for Remote Non Profit Accounting jobs?

Cities near Rochester, NY with the most Remote Non Profit Accounting job openings:

Remote Non Profit Accounting jobs near you
Infographic showing various Remote Non Profit Accounting job openings in Rochester, NY as of July 2026, with employment types broken down into 78% Full Time, 15% Part Time, and 7% Contract. Highlights an 100% Remote job distribution, with an average salary of $51,151 per year, or $24.6 per hour.

Senior Accountant

Pronexus, LLC

Rochester, NY • Remote

$68K - $85K/yr

Full-time, Part-time

Re-posted 7 days ago

Job description

Job description:

Senior Accountant

*Part-Time or Full-Time, Remote, On-Site, and Hybrid Opportunities Available

Diversify and accelerate your work experience, elevate your career marketability, and increase your earnings with ProNexus. Visit our Career Page to learn more about how ProNexus can be a great steppingstone at any stage of your career.

ProNexus, LLC is seeking a Senior Accountant to join our Firm.

Joining ProNexus offers the opportunity to work with diverse clients and tackle challenging projects that will expand your skills and expertise in the field of accounting and finance. Enjoy the freedom and flexibility to choose engagements, manage workload and control your work life balance.

If you are a motivated and dedicated professional looking for a rewarding career opportunity, we encourage you to apply and become part of our team.

Attributes of our consultants include: commitment to unparalleled client service, adept at navigating complex and dynamic scenarios, possessing strong communication acumen, and proficient in problem-solving, execution, and knowledge transfer. Skilled in multitasking to efficiently meet diverse demands of our clients.

About the role:

This role involves managing complex accounting tasks, ensuring compliance with regulations, and providing strategic financial guidance. Senior Accountants will collaborate with management teams to optimize accounting processes, strengthen internal controls, and drive financial performance.

Key Responsibilities

1. Financial Reporting and Analysis

a. Oversee the preparation and analysis of financial statements, including balance sheets, income statements, and cash flow statements.

b. Conduct detailed financial analysis to assess performance, identify trends, and provide insights to management.

c. Ensure accuracy, completeness, and compliance with accounting standards and regulatory requirements.

d. Support nonprofit accounting functions including fund accounting, restricted fund tracking, and grant-related financial reporting.

2. Month-end and Year-end Close Processes

a. Manage month-end and year-end close processes, including journal entries, reconciliations, and financial statement preparation.

b. Ensure timely and accurate completion of close activities, coordinating with internal teams and external stakeholders as needed.

c. Review and analyze financial data to identify variances and discrepancies, resolving issues promptly.

3. Internal Controls and Compliance

a. Establish and maintain internal control procedures to ensure the integrity of financial data and compliance with regulatory requirements.

b. Conduct periodic reviews and audits to assess compliance with accounting policies, procedures, and standards.

4. Financial Systems and Process Improvement

a. Evaluate existing accounting processes, systems, and workflows to identify opportunities for improvement and optimization.

b. Implement process enhancements, automation initiatives, and best practices to streamline workflows and enhance efficiency.

c. Provide training and guidance to finance teams to ensure adherence to best practices and standards.

5. Budgeting and Forecasting Support

a. Assist in the development and management of budgets, forecasts, and financial plans in collaboration with management teams.

b. Provide support for budgeting and forecasting processes, including data gathering, analysis, and presentation preparation.

c. Monitor budget performance, analyze variances, and recommend corrective actions to achieve financial targets.

6. Stakeholder Communication and Relationship Management

a. Communicate financial results, analysis, and recommendations effectively to executive management and stakeholders.

b. Collaborate with cross-functional teams to address accounting issues, support decision-making, and achieve organizational goals.

c. Build and maintain strong relationships with clients, providing responsive and high-quality service.

Qualifications:

  • Bachelor’s degree in Accounting, Finance, Business Administration, or related field.
  • Master’s degree or CPA preferred.
  • Extensive experience with accounting software such as QuickBooks, NetSuite, Sage, PeopleSoft, or Workday
  • Strong knowledge of GAAP principles and technical accounting standards.
  • Minimum of 5+ years of experience in accounting or finance roles with a focus on financial reporting, reconciliations, and internal controls.
  • Experience supporting nonprofit organizations, including fund accounting, grants management, and grant reporting, is preferred.
  • Excellent analytical, problem-solving, and critical thinking skills, with attention to detail and accuracy.
  • Strong communication, interpersonal, and leadership skills, with the ability to collaborate effectively with diverse stakeholders.
  • Proven ability to manage multiple priorities, meet deadlines, and deliver high-quality results in a dynamic environment.
  • Experience in a customer service role / client facing, public accounting, consulting or advisory roles is advantageous.