Developing, wrapping, and adapting domain-specific tools for molecular modeling, data analysis, process optimization, molecular modeling, and more * Deploying custom, agentic scientific workflows ...
Developing, wrapping, and adapting domain-specific tools for molecular modeling, data analysis, process optimization, molecular modeling, and more * Deploying custom, agentic scientific workflows ...
Generative modeling methods Diffusion models or other generative architectures applied to scientific or molecular problems. * LLM post-training techniques Experience with SFT, RLHF, synthetic data ...
Generative modeling methods Diffusion models or other generative architectures applied to scientific or molecular problems. * LLM post-training techniques Experience with SFT, RLHF, synthetic data ...
Machine Learning Research Scientist/Senior Machine Learning Research Scientist, Structure and Sim...
Manhattan, NY · On-site
$108K - $138K/yr
Responsibilities : • Design and train foundation models at scale to answer challenging research questions in large-molecule drug discovery and protein engineering. • Leverage massive structural ...
Machine Learning Research Scientist/Senior Machine Learning Research Scientist, Structure and Sim...
Manhattan, NY · On-site
$108K - $138K/yr
Responsibilities : • Design and train foundation models at scale to answer challenging research questions in large-molecule drug discovery and protein engineering. • Leverage massive structural ...
Machine Learning Research Scientist/Senior Machine Learning Research Scientist, Structure and Sim...
South San Francisco, CA · On-site
$118K - $150K/yr
Responsibilities : • Design and train foundation models at scale to answer challenging research questions in large-molecule drug discovery and protein engineering. • Leverage massive structural ...
Machine Learning Research Scientist/Senior Machine Learning Research Scientist, Structure and Sim...
South San Francisco, CA · On-site
$118K - $150K/yr
Responsibilities : • Design and train foundation models at scale to answer challenging research questions in large-molecule drug discovery and protein engineering. • Leverage massive structural ...
Lead efforts focused on molecular modeling, structure-based drug design and generative design * Advance current drug discovery process by co-developing augmented computational strategy for hit ...
Lead efforts focused on molecular modeling, structure-based drug design and generative design * Advance current drug discovery process by co-developing augmented computational strategy for hit ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Develop data-driven models using sequence and 3D molecular shape representations leveraging AI and physics-based approaches * Expand OpenEye's biomolecular modeling and protein informatics ...
Develop data-driven models using sequence and 3D molecular shape representations leveraging AI and physics-based approaches * Expand OpenEye's biomolecular modeling and protein informatics ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Principal Scientist, Computational Chemistry
South San Francisco, CA · On-site
$202K - $236K/yr
Lead efforts focused on molecular modeling, structure-based drug design and generative design * Advance current drug discovery process by co-developing augmented computational strategy for hit ...
Principal Scientist, Computational Chemistry
South San Francisco, CA · On-site
$202K - $236K/yr
Lead efforts focused on molecular modeling, structure-based drug design and generative design * Advance current drug discovery process by co-developing augmented computational strategy for hit ...
Computational Scientist
San Francisco, CA · On-site
$150K - $250K/yr
Python, PyTorch, TensorFlow, CUDA, Conda, Docker, AWS (EC2, S3, DynamoDB), molecular modeling tools, protein design frameworks, structural biology tooling, APIs and workflow orchestration. Week in ...
Computational Scientist
San Francisco, CA · On-site
$150K - $250K/yr
Python, PyTorch, TensorFlow, CUDA, Conda, Docker, AWS (EC2, S3, DynamoDB), molecular modeling tools, protein design frameworks, structural biology tooling, APIs and workflow orchestration. Week in ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Biochemist/Molecular Biologist
Cambridge, MA · On-site
$35 - $41.82/hr
Contract Compensation: $35-$41.82 Work Model: Onsite - onsite Hours: 40.0 hours/week Overview Our clients BioMedicine Design (BMD) is seeking a highly motivated Biochemist/Molecular Biologist to join ...
Sr. Scientist, NMR Spectroscopy
$92K - $126K/yr
Functional knowledge of computational chemistry or ability to apply molecular modeling methods to help solve NMR problems * Familiarity with multiple analytical methods (HPLC, GC, UV, FT-IR, MS, TGA ...
Sr. Scientist, NMR Spectroscopy
$92K - $126K/yr
Functional knowledge of computational chemistry or ability to apply molecular modeling methods to help solve NMR problems * Familiarity with multiple analytical methods (HPLC, GC, UV, FT-IR, MS, TGA ...
Sr. Scientist, NMR Spectroscopy
Rahway, NJ · On-site
$92K - $126K/yr
Functional knowledge of computational chemistry or ability to apply molecular modeling methods to help solve NMR problems * Familiarity with multiple analytical methods (HPLC, GC, UV, FT-IR, MS, TGA ...
Sr. Scientist, NMR Spectroscopy
Rahway, NJ · On-site
$92K - $126K/yr
Functional knowledge of computational chemistry or ability to apply molecular modeling methods to help solve NMR problems * Familiarity with multiple analytical methods (HPLC, GC, UV, FT-IR, MS, TGA ...
Molecular & Cell Biologist
Boston, MA · On-site
$50 - $54.95/hr
Molecular & Cell Biologist Location ... Boston, MA Contractor Work Model : Onsite Hours : M-F 8am-5pm Compensation : $50.00 - $54.95/hr ...
Molecular & Cell Biologist
Boston, MA · On-site
$50 - $54.95/hr
Molecular & Cell Biologist Location ... Boston, MA Contractor Work Model : Onsite Hours : M-F 8am-5pm Compensation : $50.00 - $54.95/hr ...
ML Research Scientist - Computational Biophysics
San Francisco, CA · On-site
$200K - $270K/yr
The Bio team develops our core molecular technologies, validates their performance in vitro and in vivo, and demonstrates their advanced capabilities in animal models. We build custom experimental ...
ML Research Scientist - Computational Biophysics
San Francisco, CA · On-site
$200K - $270K/yr
The Bio team develops our core molecular technologies, validates their performance in vitro and in vivo, and demonstrates their advanced capabilities in animal models. We build custom experimental ...
Senior Machine Learning Scientist I, Drug Discovery Analytics
Redwood City, CA · Hybrid
$112K - $153K/yr
Cheminformatics or molecular modeling tools (RDKit, OpenEye, etc.). * Multi-omics data analysis. * Cloud computing environments. * MLOps or scalable model deployment. #LI-Hybrid #LI-LN1
Senior Machine Learning Scientist I, Drug Discovery Analytics
Redwood City, CA · Hybrid
$112K - $153K/yr
Cheminformatics or molecular modeling tools (RDKit, OpenEye, etc.). * Multi-omics data analysis. * Cloud computing environments. * MLOps or scalable model deployment. #LI-Hybrid #LI-LN1
Molecular & Cell Biologist
Boston, MA · On-site
$50 - $54.95/hr
Molecular & Cell Biologist Location ... Boston, MA Contractor Work Model : Onsite Hours : M-F 8am-5pm Compensation : $50.00 - $54.95/hr ...
Molecular & Cell Biologist
Boston, MA · On-site
$50 - $54.95/hr
Molecular & Cell Biologist Location ... Boston, MA Contractor Work Model : Onsite Hours : M-F 8am-5pm Compensation : $50.00 - $54.95/hr ...
Molecular & Cell Biologist
Boston, MA · On-site
$50 - $54.95/hr
Molecular & Cell Biologist Location ... Boston, MA Contractor Work Model : Onsite Hours : M-F 8am-5pm Compensation : $50.00 - $54.95/hr ...
Molecular & Cell Biologist
Boston, MA · On-site
$50 - $54.95/hr
Molecular & Cell Biologist Location ... Boston, MA Contractor Work Model : Onsite Hours : M-F 8am-5pm Compensation : $50.00 - $54.95/hr ...
Molecular Modeling information
See salary details
$11K - $19.4K
0% of jobs
$19.4K - $27.8K
0% of jobs
$27.8K - $36.2K
0% of jobs
$36.2K - $44.6K
0% of jobs
$44.6K - $53K
0% of jobs
$53K - $61.5K
0% of jobs
$65.5K is the 25th percentile. Wages below this are outliers.
$61.5K - $69.9K
52% of jobs
$69.9K - $78.3K
15% of jobs
$78.3K - $86.7K
0% of jobs
$86.7K - $95.1K
1% of jobs
$96.9K is the 75th percentile. Wages above this are outliers.
$95.1K - $103.5K
32% of jobs
$11K
$80.7K
$103.5K
How much do molecular modeling jobs pay per year?
What is a Molecular Modeling job?
A Molecular Modeling job involves using computer simulations and theoretical techniques to study molecular structures, interactions, and properties. Professionals in this field apply computational chemistry, molecular dynamics, and quantum mechanics to predict molecular behavior in drug discovery, materials science, and biochemistry. They work with specialized software and collaborate with experimental scientists to design and optimize compounds for various applications.
What are the typical career advancement opportunities for someone in a Molecular Modeling position?
Molecular modeling professionals can pursue a variety of career advancement opportunities, including progressing to lead scientist or principal investigator roles, moving into project management, or specializing in areas like drug design or materials science. With experience, you may also transition into roles in academia, regulatory affairs, or scientific consulting. Continued professional development through advanced degrees, certifications, or technical workshops can further expand your options and responsibilities. Additionally, collaborating on interdisciplinary projects and publishing research can enhance your reputation and open doors to leadership positions in the field.
What are the key skills and qualifications needed to thrive in the Molecular Modeling position, and why are they important?
To thrive in Molecular Modeling, you typically need a strong background in chemistry, biochemistry, or a related field, with a solid understanding of molecular structures and computational methods. Experience with molecular modeling software such as Schrödinger, MOE, or Gaussian, as well as familiarity with scripting languages like Python, is highly valuable. Analytical thinking, problem-solving abilities, and effective communication are key soft skills for interpreting complex data and collaborating with interdisciplinary teams. These qualifications are crucial for accurately modeling molecular systems, advancing research projects, and facilitating successful teamwork in scientific environments.

Other
Posted 23 days ago
Job description
Your Impact at LILA
We're seeking extraordinarily talented Forward Deployed Engineers across Engineer, Senior Engineer, and Lead Engineer levels to join our growing team. Our FDEs are high-performing generalists with a broad set of skills, in addition to depth in one or more focus areas.
As an FDE, you'll embed directly with our internal biotech and science teams as well as external customers, living their problems and rapidly building solutions that transform their research capabilities. You'll leverage our AI and software platform tools while developing bespoke features that address each customer's unique challenges. This isn't traditional software development-it's high-velocity, AI-fueled, high-impact engineering where you'll ship production code in days, not months.
What You'll Be Building
- Developing, wrapping, and adapting domain-specific tools for molecular modeling, data analysis, process optimization, molecular modeling, and more
- Deploying custom, agentic scientific workflows that integrate with industrial instruments (PLCs, control software) and data systems (ERP, MES, SCADA)
- Building real-time data pipelines that transform messy scientific data into actionable insights
- Creating intuitive interfaces that make complex AI/ML capabilities accessible to scientists
- Architecting solutions that scale from proof-of-concept to enterprise-wide deployment
What You'll Need to Succeed
- Background in biology, molecular science, or related scientific field
- Outstanding communication skills-you'll interface directly with both executives and the manufacturing line
- Experience with data engineering, ETL pipelines, and working with complex/messy datasets
- Strong full-stack development skills with the ability to work across backend, frontend, and data layers
- Exceptional problem-solving abilities and comfort with ambiguous requirements
- Knack for product discovery and ability to pass requirements back to the platform
- Willingness to travel to customer sites for frequent and extended deployments
Bonus Points For
- Previous customer-facing or consulting experience
- Depth in controls engineering and machine learning
- Experience with scientific computing libraries (NumPy, Pandas, SciPy, RDKit)
- Familiarity with ML/AI implementation and deployment
- Familiarity with modern web technologies (TypeScript, React)
What Makes a Great FDE
- Customer Obsessed: You're energized by understanding customer problems deeply and seeing your solutions drive real impact
- Fast Learner: You quickly grasp new scientific domains and translate complex requirements into elegant solutions
- Autonomous: You thrive with minimal supervision and take extreme ownership of customer success
- Collaborative: You work seamlessly with both technical and non-technical stakeholders
- Technically Versatile: You're comfortable jumping between technologies and picking up new tools as needed
Ready to Transform Scientific Discovery?
If you're excited about embedding with world-class scientists, shipping impactful solutions at startup speed, and building the future of scientific software, we want to hear from you. Join us in our mission to accelerate breakthrough discoveries that will define the next century of human progress.