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Lab Automation Manager Jobs (NOW HIRING)

... or manager. * Contribute to Stabilize / Standardize / Optimize projects from intake through ... Adhere to lab safety protocols and regulatory requirements. Collaboration, Interaction & Projects

Build multi-agent systems with robust orchestration, state management, error recovery, and tool ... Partner with automation engineers and scientists to transition prototypes into reliable lab ...

... or manager. * Contribute to Stabilize / Standardize / Optimize projects from intake through ... Adhere to lab safety protocols and regulatory requirements. Collaboration, Interaction & Projects

Senior Lab Automation Engineer

Austin, TX · On-site

$106K - $133K/yr

The Senior Lab Automation Engineer is an experienced engineer with expertise in the development and ... Strong project management skills, organizational skills, and written and verbal communication ...

Lab Operations Specialist

Aurora, CO · On-site

$65K - $76K/yr

Experience operating liquid handlers or lab automation systems * Experience with laboratory inventory management systems (LIMS) or biorepository databases * Experience carrying out tasks in a GLP ...

The Role The Associate Director, Quality Control Lab Automation Strategy & Digital Integration is responsible for leading the strategy, implementation, and lifecycle management of laboratory ...

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How much do lab automation manager jobs pay per year?

As of Sep 13, 2026, the average yearly pay for lab automation manager in the United States is $116,607.00, according to ZipRecruiter salary data. Most workers in this role earn between $91,500.00 and $139,000.00 per year, depending on experience, location, and employer.

What is a lab automation manager?

A Lab Automation Manager is a professional responsible for overseeing the implementation, maintenance, and optimization of automated systems in laboratory environments. They ensure that laboratory processes such as sample handling, data analysis, and equipment operation are efficiently automated to improve accuracy and productivity. Their role often includes managing teams, coordinating with IT and scientific staff, and evaluating new technologies to streamline lab workflows. Lab Automation Managers play a crucial part in modern laboratories by integrating robotics, software, and hardware to enable high-throughput and reproducible scientific results.

What are some common challenges faced by a lab automation manager, and how can they be addressed?

A Lab Automation Manager often encounters challenges such as integrating new automation technologies with existing laboratory workflows and ensuring reliable data transfer between instruments and software systems. Additionally, managing cross-functional teams and training staff to adapt to automated processes can be complex. These challenges can be addressed by maintaining clear communication with stakeholders, staying updated on the latest automation trends, and providing ongoing training and support to team members to ensure a smooth transition and sustained productivity.

What are the key skills and qualifications needed to thrive as a lab automation manager, and why are they important?

To thrive as a Lab Automation Manager, you need expertise in laboratory science, automation technologies, and project management, typically supported by a degree in science or engineering and relevant industry experience. Familiarity with laboratory information management systems (LIMS), robotics, and programming languages such as Python or VBA, as well as certifications like Six Sigma or PMP, are commonly required. Strong leadership, problem-solving, and communication skills distinguish top performers in this role. These capabilities are crucial for streamlining lab operations, ensuring data integrity, and driving innovation in laboratory processes.

What cities are hiring for Lab Automation Manager jobs?

Cities with the most Lab Automation Manager job openings:

What states have the most Lab Automation Manager jobs?

States with the most job openings for Lab Automation Manager jobs include:

What are popular job titles related to Lab Automation Manager jobs?

For Lab Automation Manager jobs, the most frequently searched job titles are:

Infographic showing various Lab Automation Manager job openings in the United States as of August 2026, with employment types broken down into 88% Full Time, 11% Part Time, and 1% Contract. Highlights an 80% Physical, 2% Hybrid, and 18% Remote job distribution, with an average salary of $116,607 per year, or $56.1 per hour.

Automation Engineer

Austin, TX • On-site

Natera
Biotechnology Research and Development • 1 - 5K employees

Full-time

Posted 10 days ago


Natera rating

7.8

Company rating: 7.8 out of 10

Based on 39 frontline employees who took The Breakroom Quiz


Job description

Position Summary

The Automation Engineer is an intermediate role focused on deployment, optimization, and support of automated systems and software tools, including workcells, liquid handlers, and analytical instruments. This engineer has more independence than an Associate and is expected to have a solid foundation in sustaining engineering (troubleshooting and development).

This individual should have a solid understanding of most complex automated liquid handling systems used in the lab, and can drive engineering projects of medium complexity independently and of high complexity with some guidance. They document work completely, follow SOPs, and contribute to Production Engineering documentation and team knowledge.

Work is organized across Production Automation Engineering's project portfolio categories-Stabilize, Standardize, and Optimize-and commonly includes liquid-handler capacity expansion, platform upgrades, assay/workflow verification, instrument troubleshooting, and go-live support for production systems.

Roles and Responsibilities

Complexity & Problem Solving

  • Operate as a semi-autonomous individual contributor within Production Engineering.
  • Deploy liquid handling robotics for capacity expansion. Use SOPs or work instructions when available and assist with drafting documentation for new deployments.
  • Perform defined continuous improvement projects; take ownership of assigned work and report to the project leader and/or manager.
  • Contribute to Stabilize / Standardize / Optimize projects from intake through execution, including providing status updates and supporting schedule and % complete tracking.
  • Handle complex troubleshooting, repairs, and maintenance. Provide 2nd-tier support to the Service Engineering team.
  • Solve non-routine problems with some guidance.
  • Perform assignments following SOPs.
  • Support technical work independently on medium-complexity scope projects and with guidance on high-complexity scope.
  • Assist with performance qualification (PQ) and verification activities for new or updated automated methods.
  • Draft SOPs and work instructions. Contribute to the Production Engineering documentation library.
  • Continuously learn and build technical knowledge across platforms and assays.
  • Demonstrate proficiency in the use of some controlling, scheduling, and supporting software.
  • Be well versed in some complex laboratory instruments and the assays run on these systems.
  • Develop solutions of medium complexity; understand when to reach out for guidance.
  • Learn to analyze and interpret test data for troubleshooting and development.
  • Document activities completely and with appropriate detail. Adhere to Good Documentation Practices (GDP) and change-control practices as applicable.
  • Adhere to lab safety protocols and regulatory requirements.

Collaboration, Interaction & Projects

  • Collaborate cross-functionally on medium-scale projects with Production, R&D, Quality, and vendors as assigned.
  • Provide primary floor support in workcell laboratories and secondary floor support in other labs.
  • Actively participate in sprint meetings and provide updates.
  • Actively contribute in group meetings.
  • Raise issues that could lead to continuous improvement projects.
  • Lead initiatives, with guidance, to improve Production Engineering efficiency or ease of execution.
  • Share progress through Production Automation Engineering project intake / PMO tracking as requested.

Management & Supervision

  • No direct management responsibilities.

Qualifications

Education & Experience

  • Bachelor's degree in Engineering, Life Sciences, or related field.
  • 2-5 years of experience in laboratory automation engineering, with hands-on experience in lab automation troubleshooting and development.
  •  

Required Knowledge & Skills

  • Understanding of diagnostic laboratory workflows, instrumentation, and software.
  • Proficiency in lab automation controlling software and scheduling software; learning applicable supporting software tools (e.g., Python).
  • Strong attention to detail and ability to follow protocols meticulously.
  • Strong knowledge of GDP and regulatory requirements.
  • Excellent organizational and communication skills for managing multiple projects.
  • Ability to travel between local Austin sites (within ~1 mile) to support multiple labs.

Preferred / Nice to Have

  • Background in NGS and/or clinical laboratories (e.g., extraction, library preparation, or sequencing workflows).
  • Hands-on experience programming and operating liquid handlers-especially Tecan, Hamilton, Biomek, and/or Cellario.
  • Experience contributing to capacity-expansion deployments of liquid handlers in a production environment.
  • Familiarity with workcell controlling / scheduling software (e.g., Cellario, GBG).
  • Familiarity with sequencing / long-read platforms and related lab equipment.
  • Experience supporting verification, validation, and PQ activities for automated methods.
  • Experience working with LIMS systems.
  • Working knowledge of 21 CFR Part 11, FDA, and CLIA requirements.
  • Comfort working under change control (CCR) and documented equivalency studies.

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