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Freelance Healthcare Integration Engineer Jobs (NOW HIRING)

EHR Integration Engineer

Boston, NY · On-site

$140K - $160K/yr

We're seeking an experienced EHR Integration Engineer specializing in integrating with common EHRs ... Strong knowledge of healthcare interoperability standards, including FHIR, HL7v2, and SMART on FHIR.

EHR Integration Engineer

New York, NY · On-site

$140K - $160K/yr

We're seeking an experienced EHR Integration Engineer specializing in integrating with common EHRs ... Strong knowledge of healthcare interoperability standards, including FHIR, HL7v2, and SMART on FHIR.

Mirth Integration Engineer/Developer

Reston, VA · On-site

$108K - $145K/yr

We are looking for a skilled and adaptable Mirth Integration Engineer/Developer, to support our Competitive billion DOD Healthcare Management System Modernization (DHMSM) program in Vienna, VA ...

About the Role Hello Patient is building Mia, an AI assistant that transforms how healthcare providers engage with patients. We're hiring a Customer Integration Engineer - you'll be the technical ...

Customer Integration Engineer

New York, NY · On-site

$110K - $160K/yr

About the Role Hello Patient is building Mia, an AI assistant that transforms how healthcare providers engage with patients. We're hiring a Customer Integration Engineer - you'll be the technical ...

Customer Integration Engineer

Austin, TX · On-site

$110K - $160K/yr

About the Role Hello Patient is building Mia, an AI assistant that transforms how healthcare providers engage with patients. We're hiring a Customer Integration Engineer - you'll be the technical ...

Integration Engineer

Bulverde, TX · On-site

$93K - $125K/yr

Integration Engineer As an Integration Engineer at Futurex, you'll find yourself at the ... Health, dental, vision, life, and short/long-term disability insurance * Paid vacation, holidays ...

Integration Engineer

Bulverde, TX

$93K - $125K/yr

Integration Engineer As an Integration Engineer at Futurex, you'll find yourself at the ... Health, dental, vision, life, and short/long-term disability insurance * Paid vacation, holidays ...

Integration Engineer

Bulverde, TX · On-site

$93K - $125K/yr

Integration Engineer As an Integration Engineer at Futurex, you'll find yourself at the ... Health, dental, vision, life, and short/long-term disability insurance * Paid vacation, holidays ...

OR · On-site

$166K/yr

The ServiceNow Integration Engineer focused on Healthcare Systems/CDW will be responsible for designing and implementing integration solutions that connect ServiceNow with various healthcare systems ...

Integration Engineer (3419)

Minot, ND · On-site +1

$106K - $165K/yr

The Integration Engineer is responsible for designing, developing, modifying, and maintaining ... Design, develop, implement, and maintain HL7 and other healthcare related system interfaces ...

$133K - $222K/yr

Engineer, integrate, test, and deploy new and existing C4I systems, sensors, and data feeds ... healthcare benefits, paid leave, retirement plans, insurance programs, and education and training ...

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Showing results 1-20

Freelance Healthcare Integration Engineer information

See salary details

$44.5K

$124.3K

$173.5K

How much do freelance healthcare integration engineer jobs pay per year?

As of Jun 11, 2026, the average yearly pay for freelance healthcare integration engineer in the United States is $124,275.00, according to ZipRecruiter salary data. Most workers in this role earn between $104,000.00 and $140,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a Freelance Healthcare Integration Engineer, and why are they important?

To thrive as a Freelance Healthcare Integration Engineer, you need expertise in system integration, HL7/FHIR standards, and a strong background in healthcare IT, often supported by a degree in computer science or a related field. Familiarity with integration engines (like Mirth Connect, Cloverleaf), EHR systems (such as Epic or Cerner), and relevant certifications (e.g., HL7 or FHIR certifications) is typically required. Excellent problem-solving, communication, and project management skills help you navigate client needs and collaborate effectively with diverse healthcare teams. These capabilities are essential for ensuring seamless data exchange, regulatory compliance, and successful project outcomes in complex healthcare environments.

What are some common challenges faced by freelance healthcare integration engineers when working with multiple healthcare systems?

Freelance healthcare integration engineers often encounter challenges such as navigating varying data standards (like HL7, FHIR, or DICOM), integrating legacy systems with modern platforms, and ensuring robust data security and compliance with regulations like HIPAA. Additionally, since they work with different clients, they must quickly adapt to diverse IT environments and collaborate effectively with both clinical and technical teams. Strong communication skills and proactive problem-solving are essential to manage these integration complexities and deliver seamless interoperability.

What are freelance healthcare integration engineers?

Freelance healthcare integration engineers are independent professionals who specialize in connecting different healthcare systems, such as electronic health records (EHRs), medical devices, and third-party applications. They use standards like HL7, FHIR, and DICOM to ensure seamless data exchange and interoperability between disparate systems. These engineers often work on a project-by-project basis for hospitals, clinics, or healthcare software companies to improve workflow efficiency and patient care. Their freelance status allows organizations to access specialized skills without committing to a full-time hire.

What is the difference between Freelance Healthcare Integration Engineer vs Healthcare Software Developer?

AspectFreelance Healthcare Integration EngineerHealthcare Software Developer
CredentialsRelevant certifications in healthcare IT, HL7, FHIR, and integration toolsProgramming certifications, software development degrees, and healthcare domain knowledge
Work EnvironmentContract-based, project-specific, often remote or on-site at healthcare facilitiesFull-time or part-time employment in healthcare or tech companies, primarily office or remote
Employer & Industry UsageFreelance/consultant roles serving healthcare providers, EHR vendors, and health IT projectsHealthcare organizations, health IT firms, or software companies developing healthcare applications

While both roles involve healthcare technology, Freelance Healthcare Integration Engineers focus on connecting various health IT systems through integrations, often working independently on specific projects. Healthcare Software Developers typically design and build healthcare applications or features within larger teams. The key difference lies in the scope: integration engineers specialize in system interoperability, whereas developers focus on software creation.

More about Freelance Healthcare Integration Engineer jobs
What are the most commonly searched types of Healthcare Integration Engineer jobs? The most popular types of Healthcare Integration Engineer jobs are:
Infographic showing various Freelance Healthcare Integration Engineer job openings in the United States as of June 2026, with employment types broken down into 6% Locum Tenens, 93% Full Time, and 1% Part Time. Highlights an 87% Physical, 5% Hybrid, and 8% Remote job distribution, with an average salary of $124,275 per year, or $59.7 per hour.
Healthcare Data Integration Engineer (FHIR / OMOP)

Healthcare Data Integration Engineer (FHIR / OMOP)

John Snow Labs

Remote

Contractor

Posted 8 days ago


Job description

Company Description

John Snow Labs is an award-winning AI and NLP company, accelerating progress in data science by providing state-of-the-art software, data, and models. Founded in 2015, it helps healthcare and life science companies build, deploy, and operate AI products and services. John Snow Labs is the winner of the 2018 AI Solution Provider of the Year Award, the 2019 AI Platform of the Year Award, the 2019 International Data Science Foundation Technology award, and the 2020 AI Excellence Award.

John Snow Labs is the developer of Spark NLP - the world's most widely used NLP library in the enterprise - and is the world's leading provider of state-of-the-art clinical NLP software, powering some of the world's largest healthcare & pharma companies. John Snow Labs is a global team of specialists, of which 33% hold a Ph.D. or M.D. and 75% hold at least a Master's degree in disciplines covering data science, medicine, software engineering, pharmacy, DevOps and SecOps.

Job Description

We are seeking a Healthcare Data Integration Engineer to lead clinical data integration efforts.
This role will be responsible for connecting client systems to our platform, designing and implementing data ingestion pipelines, and ensuring that healthcare data is transformed into standardized models suitable for analytics and AI applications.
The ideal candidate combines healthcare interoperability expertise with strong technical implementation skills. You should be comfortable working directly with client technical teams, understanding source systems, designing mappings, and building robust integration solutions.

Qualifications

Responsibilities
Client Onboarding & Integration
Lead technical onboarding activities for new clients.
Analyze source systems and data architectures.
Design and implement connectors to various data sources, including:
EHR systems
  FHIR servers
 
HL7 interfaces
  Relational databases
 
Data warehouses
  Cloud storage platforms (S3, Azure Blob, GCS)
 
Flat-file and CSV-based exchanges
  APIs and custom integrations
Collaborate with client IT and clinical informatics teams to understand source data structures and workflows.
Define integration strategies and technical specifications.
Healthcare Data Standardization
Map source data into healthcare interoperability standards and common data models.
Support transformation of clinical data into OMOP CDM.
Develop and maintain source-to-target mappings.
Identify and resolve data quality, terminology, and interoperability issues.
Participate in vocabulary mapping activities involving:
SNOMED CT
 
ICD-10
  LOINC
 
RxNorm
  CPT
 
Other local and proprietary terminologies
Data Engineering
Build, test, and maintain ETL/ELT pipelines.
Develop reusable integration frameworks and connector libraries.
Monitor integration processes and troubleshoot production issues.
Improve automation of onboarding and data validation workflows.
Document integration designs, mappings, and operational procedures.
Collaboration
Work closely with data engineers, data scientists, and machine learning engineers.
Support data validation and quality assurance activities.
Contribute to interoperability best practices and platform architecture.
Serve as a technical point of contact during onboarding projects.
Required Qualifications
2+ years of experience in healthcare data integration, interoperability, or clinical data engineering.
Experience working with healthcare data standards, including:
FHIR
  HL7 v2
 
Clinical terminology systems
Experience with SQL and relational databases.
Experience designing and implementing ETL pipelines.
Experience consuming and integrating REST APIs.
Understanding of healthcare data domains such as:
Encounters
 
Conditions
  Procedures
 
Medications
  Measurements/Laboratory results
 
Clinical observations
Strong problem-solving and troubleshooting skills.
Excellent communication skills and ability to work directly with client technical teams.
Preferred Qualifications
Experience with OMOP CDM.
Experience with OHDSI tools and ecosystem.
Experience mapping source systems to OMOP standard vocabularies.
Experience with terminology services and vocabulary management.
Familiarity with Epic, Cerner, MEDITECH, Athenahealth, eClinicalWorks, or other EHR platforms.
Experience with healthcare cloud environments.
Experience with Python and modern data engineering tools.
Experience with healthcare analytics or research platforms.
Nice to Have
Experience implementing FHIR servers or FHIR APIs.
Experience with healthcare NLP or unstructured clinical data.
Experience with data quality frameworks.
Experience supporting regulatory or research data initiatives.
Familiarity with observational research and real-world evidence platforms.
What Success Looks Like
Within your first year, you will:
Lead onboarding and integration projects for new clients.
Build reusable connectors that reduce onboarding effort.
Help standardize diverse healthcare data sources into OMOP CDM.
Improve terminology mapping and data quality processes.
Become a trusted technical partner for client integration efforts.
* Contribute to the evolution of a modern healthcare data and AI platform.

Additional Information

Our Commitment to You  

At John Snow Labs, we believe that diversity is the catalyst of innovation. We're committed to empowering talented people from every background and perspective to thrive.   

 We are an award-winning global collaborative team focused on helping our customers put artificial intelligence to good use faster. Our website includes The Story of John Snow, and our Social Impact page details how purpose and giving back is part of our DNA. More at JohnSnowLabs.com 

  • We are a fully virtual company, collaborating across 28 countries.
  • This is a contract opportunity, not a full-time employment role.
  • This role requires the availability of at least 30-40 hours per week.

Location
Remote-friendly. Preference for candidates able to collaborate during North American business hours.
Compensation
Competitive salary based on experience and location.