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Fermentation Engineer Jobs in Colorado (NOW HIRING)

Process Engineer

Louisville, CO · Hybrid

$82K - $118K/yr

About the Job Job Summary The Process Engineer is responsible for optimizing and scaling up ... Fermentation systems * Membrane filtration expertise a plus Knowledge, Skills & Abilities: * Strong ...

Process Engineer

Louisville, CO · Hybrid

$82K - $118K/yr

This role partners with Operations, QFS, R&I, and Engineering to deliver safe, cost-effective ... Fermentation systems * Membrane filtration expertise a plus Knowledge, Skills & Abilities: * Strong ...

Process Engineer

Louisville, CO · Hybrid

$82K - $118K/yr

Job SummaryThe Process Engineer is responsible for optimizing and scaling up manufacturing ... Homogenizationo Fermentation (yogurt, cultured products)o Fillingo Equipment controls and ...

Process Engineer

Louisville, CO · On-site

$82K - $118K/yr

This role partners with Operations, QFS, R&I, and Engineering to deliver safe, cost-effective ... Fermentation systems * Membrane filtration expertise a plus Knowledge, Skills & Abilities: * Strong ...

Quality Engineer

Broomfield, CO · On-site

$75K - $85K/yr

Position Summary The Quality Engineer supports the Quality Manager in managing, maintaining, and ... Fermentation time, temperature, and pH controls * Sanitation and environmental programs * Support ...

Quality Engineer

Thornton, CO · On-site

$75K - $85K/yr

Position Summary The Quality Engineer supports the Quality Manager in managing, maintaining, and ... Fermentation time, temperature, and pH controls * Sanitation and environmental programs * Support ...

Position Summary The Quality Engineer supports the Quality Manager in managing, maintaining, and ... Fermentation time, temperature, and pH controls * Sanitation and environmental programs * Support ...

Process Lead - Packaging

Golden, CO · On-site

$106K - $138K/yr

You have aBachelor'sdegreein packaging, technology, engineering, or related field and/or 2+ years ... Expertise in brewing processes, including raw material handling, fermentation, yeast management ...

Process Lead - Packaging

Golden, CO · On-site

$106K - $138K/yr

You have a Bachelor's degree in packaging, technology, engineering, or related field and/or 2+ ... Expertise in brewing processes, including raw material handling, fermentation, yeast management ...

Process Lead - Packaging

Golden, CO · On-site

$106K - $138K/yr

You have a Bachelor's degree in packaging, technology, engineering, or related field and/or ... Expertise in brewing processes, including raw material handling, fermentation, yeast management ...

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Showing results 1-20

Fermentation Engineer information

See Colorado salary details

$43.1K

$116.4K

$158.3K

How much do fermentation engineer jobs pay per year?

As of Aug 12, 2026, the average yearly pay for fermentation engineer in Colorado is $116,364.00, according to ZipRecruiter salary data. Most workers in this role earn between $95,200.00 and $155,100.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a fermentation engineer, and why are they important?

To thrive as a Fermentation Engineer, you need a solid background in bioprocess engineering, microbiology, and chemical engineering, often supported by a relevant degree. Familiarity with fermentation control systems, bioreactor operation, and analytical laboratory tools is typically required. Strong problem-solving, teamwork, and communication skills help you optimize processes and collaborate across multidisciplinary teams. These competencies are vital to ensure efficient, safe, and high-quality fermentation processes in industries like biotech, food, and pharmaceuticals.

What are the most common challenges faced by fermentation engineers in scaling up processes from lab to production?

Fermentation Engineers often encounter challenges when scaling up processes from laboratory to industrial scale, such as maintaining consistent product yields, ensuring robust microbial performance, and managing contamination risks. Differences in equipment, mixing, oxygen transfer, and temperature control can significantly impact the reproducibility and efficiency of fermentation. To address these challenges, engineers work closely with cross-functional teams, including microbiologists, process engineers, and quality assurance, to optimize protocols and implement rigorous monitoring systems throughout scale-up.

What does a fermentation engineer do?

A fermentation engineer uses state-of-the-art technologies to formulate new products and refine the processes used in existing ones. Your responsibilities in this career include setting up and testing a process involving a microorganism, such as a yeast or a bacterium, in a fermentor to create new products. You use biotechnology techniques like recombinant DNA technology. Your duties also involve operating sophisticated equipment, such as bioreactors or robots. You can find employment in a wide range of industries, from food production to agriculture to medical science.

What is the difference between Fermentation Engineer vs Microbiologist?

AspectFermentation EngineerMicrobiologist
Required CredentialsBachelor's in Bioengineering, Chemical Engineering, or related field; experience in fermentation processesBachelor's or higher in Microbiology, Biology, or related field; laboratory skills
Work EnvironmentIndustrial labs, manufacturing plants, R&D facilitiesResearch labs, clinical labs, academic institutions
Industry UsageBiotech, pharmaceuticals, food & beverage, biofuel productionHealthcare, research, environmental studies, food safety

Fermentation Engineers focus on designing, optimizing, and scaling fermentation processes in industrial settings, while Microbiologists primarily conduct research and analysis of microorganisms in laboratory environments. Both roles require a strong background in microbiology, but Fermentation Engineers emphasize process engineering and production, whereas Microbiologists focus on scientific study and experimentation.

What job categories do people searching Fermentation Engineer jobs in Colorado look for? The top searched job categories for Fermentation Engineer jobs in Colorado are:
What are popular job titles related to Fermentation Engineer jobs in CO? For Fermentation Engineer jobs in CO, the most frequently searched job titles are:
Infographic showing various Fermentation Engineer job openings in Colorado as of August 2026, with employment types broken down into 80% Full Time, and 20% Part Time. Highlights an 100% In-person job distribution, with an average salary of $116,364 per year, or $55.9 per hour.

Postdoctoral Researcher - Fermentation Engineering, Metabolic Engineering, Synthetic Biology

The National Renewable Energy Laboratory (NREL)

Golden, CO • On-site

$76K - $126K/yr

Full-time

Medical, Dental, Vision, Life, Retirement, PTO

Posted 9 days ago


Job description

Posting Title
Postdoctoral Researcher - Fermentation Engineering, Metabolic Engineering, Synthetic Biology
Location
CO - Golden
Position Type
Postdoc (Fixed Term)
Hours Per Week
40
Working at NLR
NLR is located at the foothills of the Rocky Mountains in Golden, Colorado is the nation's primary laboratory for energy systems research and development.
Join the National Laboratory of the Rockies (NLR), where world-class scientists, engineers, and experts are accelerating energy innovation through breakthrough research and systems integration. From our mission to our collaborative culture, NLR stands out in the research community for its commitment to an affordable and secure energy future. Spanning foundational science to applied systems engineering and analysis, we focus on solving complex challenges to deliver advanced, secure, reliable, and cost-effective energy solutions. Our work helps strengthen U.S. industries, support job creation, and promote national economic growth.
At NLR, you'll find a mission-driven environment supported by state-of-the-art facilities, multidisciplinary research teams, and strong collaborations with industry, academia, and other national laboratories. We offer robust professional development opportunities, and a competitive benefits package designed to support your career and well-being.
Job Description
The RRES Center at NLR has an opening for a full time Postdoctoral Researcher. The initial appointment is for one year, with possible renewal up to three years.
This center contains a talented team of scientists and technicians working in biological, chemical, and catalytic research approaches to renewable energy and materials for a circular economy. The center has strong thrusts in polymer design and upcycling, separations, synthetic biology and bioconversion, analytical sciences, computational modeling, and lignocellulosic chemistry and catalysis.
The successful candidate will be able to:
  • Work safely and independently in a laboratory setting
  • Plan and execute research in collaboration with other researchers
  • Communicate scientific results effectively, both in written and oral formats
  • Author peer-reviewed publications, and
  • Work effectively in a large, multidisciplinary, multi-institutional team of engineers and scientists

The successful candidate will collaborate on a multidisciplinary research project focused on the biological conversion of syngas (CO2, CO, H2) by an anaerobic acetogenic bacterium.
N.B. Please include all publications (including those in preparation) with full author lists in the CV you submit.
Basic Qualifications
Must be a recent PhD graduate within the last three years.
* Must meet educational requirements prior to employment start date.
Additional Required Qualifications
  • Ph.D. in Fermentation Engineering, Molecular Biology, Microbiology, or a closely related field.
  • Experience in the setup, operation, and bioprocess optimization of bioreactors, particularly with gaseous feedstocks.
  • Analytical chemistry skills (HPLC, GC) for identification and quantification of metabolites.
  • Experience cultivating and genetically modifying non-model microbes, especially acetogens or other anaerobic bacteria.
  • Demonstrated experience creating acetogen and fermentation strategies across scales, from serum bottles to fermenters.
  • Experience utilizing synthetic biology techniques for targeted generation of metabolically engineered strains with improved carbon upgrading capacity.

Preferred Qualifications
  • Deep fundamental knowledge of bacterial metabolism and physiology.
  • Mastery of molecular biology tools and techniques (PCR, plasmid design, bacterial cultivation, genetic transformation systems).
  • Demonstrated experience in microbial metabolic engineering for designing, constructing, and evaluating novel strains.
  • Exceptional organizational and written/oral communication skills.
  • Capability to work independently in generating and testing of hypotheses.
  • Experience using CRISPR, or other advanced molecular biology techniques, such as for rationally engineering improved enzymes.
  • Strong authorship track record in peer-reviewed publications.
  • Familiarity with gathering and analyzing large bioinformatics datasets (whole genome sequencing, transcriptomics, proteomics, metabolomics, genome scale modeling, metabolic flux analysis).

Job Application Submission Window
The anticipated closing window for application submission is up to 30 days and may be extended as needed.
Annual Salary Range (based on full-time 40 hours per week)
Job Profile: Postdoctoral Researcher / Annual Salary Range: $76,600 - $126,400
NLR takes into consideration a candidate's education, training, and experience, expected quality and quantity of work, required travel (if any), external market and internal value, including seniority and merit systems, and internal pay alignment when determining the salary level for potential new employees. In compliance with the Colorado Equal Pay for Equal Work Act, a potential new employee's salary history will not be used in compensation decisions.
Benefits Summary
Benefits include medical, dental, and vision insurance; short-term disability insurance*; pension benefits*; 403(b) Employee Savings Plan with employer match*; life and accidental death and dismemberment (AD&D) insurance; personal time off (PTO) and sick leave; and paid holidays. NLR employees may be eligible for, but are not guaranteed, performance-, merit-, and achievement- based awards that include a monetary component. Some positions may be eligible for relocation expense reimbursement.
* Based on eligibility rules
Badging Requirement
NLR is subject to Department of Energy (DOE) access restrictions. All employees must also be able to obtain and maintain a federal Personal Identity Verification (PIV) card as required by Homeland Security Presidential Directive 12 (HSPD-12), which includes a favorable background investigation.
Drug Free Workplace
NLR is committed to maintaining a drug-free workplace in accordance with the federal Drug-Free Workplace Act and complies with federal laws prohibiting the possession and use of illegal drugs. Under federal law, marijuana remains an illegal drug.
If you are offered employment at NLR, you must pass a pre-employment drug test prior to commencing employment. Unless prohibited by state or local law, the pre-employment drug test will include marijuana. If you test positive on the pre-employment drug test, your offer of employment may be withdrawn.
Submission Guidelines
Please note that in order to be considered an applicant for any position at NLR you must submit an application form for each position for which you believe you are qualified. Applications are not kept on file for future positions. Please include a cover letter and resume with each position application.
Equal Opportunity Employer
All qualified applicants will receive consideration for employment without regard basis of age (40 and over), color, disability, gender identity, genetic information, marital status, domestic partner status, military or veteran status, national origin/ancestry, race, religion, creed, sex (including pregnancy, childbirth, breastfeeding), sexual orientation, and any other applicable status protected by federal, state, or local laws.
Reasonable Accommodations
E-Verifywww.dhs.gov/E-VerifyFor information about right to work, click here for English or here for Spanish.
E-Verify is a registered trademark of the U.S. Department of Homeland Security. This business uses E-Verify in its hiring practices to achieve a lawful workforce.