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Director Program Management Jobs in San Rafael, CA

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Director Program Management information

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$35.7K

$121.6K

$204K

How much do director program management jobs pay per year?

As of Aug 9, 2026, the average yearly pay for director program management in San Rafael, CA is $121,564.00, according to ZipRecruiter salary data. Most workers in this role earn between $94,800.00 and $129,900.00 per year, depending on experience, location, and employer.

How does a director of program management typically collaborate with cross-functional teams to drive project success?

Directors of Program Management play a pivotal role in aligning cross-functional teams—such as engineering, product, marketing, and operations—to ensure that complex projects are delivered on time and within scope. They facilitate regular communication, resolve interdepartmental conflicts, and coordinate resources to keep everyone moving toward shared goals. This role often requires balancing strategic oversight with hands-on problem-solving, as well as fostering a collaborative culture that enables team members to contribute their expertise effectively. Strong relationship-building and negotiation skills are essential to proactively address challenges and maintain momentum across multiple initiatives.

What does a director of program management do?

A Director of Program Management oversees multiple projects or programs within an organization, ensuring they align with the company's strategic goals. They are responsible for setting priorities, allocating resources, and managing teams of project managers. This role involves coordinating across departments, mitigating risks, and ensuring that programs are delivered on time and within budget. Directors of Program Management also communicate with executive leadership and stakeholders to report on progress and outcomes.

What are the key skills and qualifications needed to thrive as a director of program management?

To thrive as a Director of Program Management, you need extensive experience in program and project management, a relevant degree (often in business or engineering), and proven leadership abilities. Familiarity with tools like Microsoft Project, Jira, and portfolio management software, along with certifications such as PMP or PgMP, is typically required. Exceptional communication, strategic thinking, and stakeholder management skills distinguish top performers in this role. These skills ensure the effective delivery of complex initiatives, alignment with organizational goals, and strong cross-functional collaboration.
What are the most commonly searched types of Program Management jobs in San Rafael, CA? The most popular types of Program Management jobs in San Rafael, CA are:
What job categories do people searching Director Program Management jobs in San Rafael, CA look for? The top searched job categories for Director Program Management jobs in San Rafael, CA are:
What cities near San Rafael, CA are hiring for Director Program Management jobs? Cities near San Rafael, CA with the most Director Program Management job openings:
Infographic showing various Director Program Management job openings in San Rafael, CA as of August 2026, with employment types broken down into 77% Full Time, 20% Part Time, 1% Temporary, and 2% Contract. Highlights an 87% Physical, 3% Hybrid, and 10% Remote job distribution, with an average salary of $121,564 per year, or $58.4 per hour.

Director, Program and Portfolio Management

Septerna

South San Francisco, CA • On-site

$230K - $255K/yr

Full-time

Posted 29 days ago


Job description

POSITION SUMMARY:   

THE ROLE

We are seeking an experienced Director of Program Management to join our dynamic team.  This role will be critical in driving programs from discovery and development candidate nomination through clinical development, ensuring high-quality, decision-ready execution across research, preclinical, regulatory, and clinical functions.  

In this role, you will provide end-to-end program management leadership, serving as the operational owner for assigned programs.  You will be accountable for integrated program plans, timelines, risk management, and governance, and will partner closely with scientific and development leaders to align execution with company strategy.  As the point of contact for program execution, you will proactively manage risks, facilitate trade-off discussions, and enable informed decision-making at both the team and executive levels.  

This position reports to the Vice President of Program and Portfolio Management and is a full-time, onsite position requiring in-person collaboration with cross-functional teams.  

KEY RESPONSIBILITIES 

Program Management and Coordination 

  • Lead program management for one or more development programs from preclinical development through clinical stages 
  • Partner with the cross-functional Program Team to define program strategy, conduct scenario planning, and translate strategy into executable plans to achieve program objectives  
  • Identify and manage program-level risks, assumptions, and interdependencies; lead mitigation planning and issue resolution
  • Escalate risks and decision points with clear options and recommendations
  • Work with teams to prepare presentations for internal and external meetings (e.g., team presentations, abstracts, posters, management review, Board of Directors meetings)

Strategic & Operational Planning 

  • Develop and maintain integrated program plans, including milestones, timelines, budgets, and resource assumptions
  • Monitor progress against plans, identify deviations, and implement mitigation strategies or alternative scenarios
  • Conduct critical path and dependency analyses to proactively identify risks and bottlenecks 

Communication & Stakeholder Management 

  • Ensure clear, consistent, and transparent communication of program status, key risks, and upcoming milestones through minutes, action items and decision tracking.
  • Align diverse stakeholders around priorities, decisions, and execution plans in a matrixed environment 

Process Excellence & Capability Building 

  • Contribute to the design, implementation, and continuous improvement of program management processes, tools, and templates
  • Promote best practices in program planning, governance, and execution across the organization 

ABOUT YOU 

  • Advanced degree relevant to drug discovery/development; Ph.D./ PharmD/MBA preferred
  • Minimum of at least 10-15+ years of experience within the Biotech or Pharma industry; prior experience in project management required, specifically in the clinical development space
  • Proven expertise in project planning, execution, and risk management, with a deep understanding of drug development processes, particularly in endocrinology, immunology, CNS 
  • Demonstrated track record of managing small molecule discovery projects from early research through development candidates and IND/CTA submissions, clinical trial management, and program strategy development
  • Experience with commonly used project management tools, including Smartsheet
  • Ability to execute diverse and novel strategies in a matrix environment; experience managing and influencing complex issues and a variety of key stakeholders  
  • Demonstrated skill in driving execution and focusing on deliverables
  • Strong organizational skills, persistent attention to detail, and ability to work independently and collaboratively to manage timelines and priorities
  • Ability to manage complex situations and adapt to changing business needs by prioritizing multiple tasks
  • Strong interpersonal and communication skills.  Demonstrated ability to collaborate closely with individual project leads/teams and scientific leadership
  • Desire to work on a small team in a fast-paced environment 

The anticipated salary range for candidates who will work in South San Francisco, CA is $230,000 - $255,000. Individual pay may vary based on additional factors, including, and without limitation, job-related skills, experience, work location and relevant education or training. Septerna's compensation package also includes benefits, stock options, and annual target bonus for full-time positions.