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Clinical Systems Analyst Jobs in Nebraska (NOW HIRING)

HIM Systems Analyst

Lincoln, NE · On-site

$31.01 - $48.84/hr

Collaborates with clinical, nonclinical and technical support teams to identify system needs and ... Data Analysis * HIM Software * Project Management * Detail Oriented * Workflow Process * Health ...

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... and other clinical systems to support quality improvement intiatives, compliance, and ... Performs data analysis using multiple methods to identify trends, gaps, and opportunities for ...

... and other clinical systems to support quality improvement intiatives, compliance, and ... Performs data analysis using multiple methods to identify trends, gaps, and opportunities for ...

... and other clinical systems to support quality improvement intiatives, compliance, and ... Performs data analysis using multiple methods to identify trends, gaps, and opportunities for ...

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Clinical Systems Analyst information

See Nebraska salary details

$52.4K

$89.5K

$126.8K

How much do clinical systems analyst jobs pay per year?

As of Aug 21, 2026, the average yearly pay for clinical systems analyst in Nebraska is $89,452.00, according to ZipRecruiter salary data. Most workers in this role earn between $72,900.00 and $103,400.00 per year, depending on experience, location, and employer.

What is a clinical systems analyst?

A clinical systems analyst oversees the computer information systems at a hospital or other medical facility. As a clinical systems analyst, your job duties include the development of software applications to support hospital requirements, troubleshooting computer system issues, and testing changes to the facility's computer software. The qualifications to have a career as a clinical systems analyst include a bachelor’s degree in computer science and experience working in a medical setting.

What are the key skills and qualifications needed to thrive as a clinical systems analyst, and why are they important?

To thrive as a Clinical Systems Analyst, you need a solid background in healthcare IT, data analysis, and systems integration, often supported by a degree in health informatics or a related field. Familiarity with electronic health record (EHR) systems such as Epic or Cerner, as well as certifications like CPHIMS or experience with HL7 standards, is valuable. Strong problem-solving, communication, and project management skills help bridge the gap between clinical staff and IT teams. These skills ensure efficient implementation and optimization of clinical systems, ultimately improving patient care and organizational workflow.

How does a clinical systems analyst typically collaborate with healthcare providers to improve electronic health record (EHR) systems?

Clinical Systems Analysts work closely with physicians, nurses, and other healthcare staff to understand their workflow needs and address challenges with EHR systems. They gather user feedback, translate clinical requirements into technical specifications, and often participate in system customization, testing, and training sessions. Regular collaboration ensures that the EHR supports clinical processes efficiently, improves patient care, and complies with healthcare regulations. This role frequently involves cross-functional teamwork, including IT departments and clinical leadership, to drive continuous system improvements.

How much does a clinical systems analyst make?

The average salary for a clinical systems analyst is around $80,000 to $100,000 annually, depending on experience, certifications, and the healthcare setting. Salaries can vary based on location, with higher wages typically found in metropolitan areas and institutions requiring specialized knowledge of electronic health records (EHR) systems and healthcare IT tools.

What are popular job titles related to Clinical Systems Analyst jobs in Nebraska?

For Clinical Systems Analyst jobs in Nebraska, the most frequently searched job titles are:

What job categories do people searching Clinical Systems Analyst jobs in Nebraska look for?

The top searched job categories for Clinical Systems Analyst jobs in Nebraska are:

What cities in Nebraska are hiring for Clinical Systems Analyst jobs?

Cities in Nebraska with the most Clinical Systems Analyst job openings:

What are popular job titles related to Clinical Systems Analyst jobs in NE?

For Clinical Systems Analyst jobs in NE, the most frequently searched job titles are:

Infographic showing various Clinical Systems Analyst job openings in Nebraska as of August 2026, with employment types broken down into 1% As Needed, 82% Full Time, 12% Part Time, 4% Contract, and 1% Nights. Highlights an 86% Physical, 4% Hybrid, and 10% Remote job distribution, with an average salary of $89,452 per year, or $43 per hour.

Senior Laboratory Beaker Clinical Systems Analyst

Children's Nebraska

Omaha, NE • On-site

Other

Posted 18 days ago


Children's Nebraska rating

7.8

Company rating: 7.8 out of 10

Based on 45 frontline employees who took The Breakroom Quiz

195th of 1,061 rated hospitals


Job description

Job Title

At Children's, the region's only full-service pediatric healthcare center, our people make us the very best for kids. Come cultivate your passion, purpose and professional development in an environment of excellence and inclusion, where team members are supported and deeply valued. Opportunities for career growth abound as we grow our services and spaces, including the cutting-edge Hubbard Center for Children. Join our highly engaged, caring team—and join us in providing brighter, healthier tomorrows for the children we serve. Children's is committed to diversity and inclusion. We are an equal opportunity employer including veterans and people with disabilities.

A Brief Overview Plan, analyze, design, test, implement and maintain laboratory Beaker applications. Researches and corrects system and user problems. Works with various primary care clinics, specialty departments, ancillary department or inpatient units to support practice and implement changes as needed to the existing systems.

Essential Functions
  • Is a role model. Sets new standards and is able to demonstrate the next level of competence.
  • Meets goals on time and with minimal to no follow up or direction. Is proactive in seeking feedback when needed and influences others that can help accomplish goals.
  • Fully stands out and consistently demonstrates exceptional accomplishments in terms of quality and quantity of work.
  • Actively and accurately maintain issue lists, build an testing documentation and coordination of team tasks as outlined by department policies and CAP regulations.
  • Build and maintain positive relationships with customers through effective and consistent communication. Reaches out to operational leadership to ensure that their information technology needs are met.
  • Develop, analyze, design, configure, test and maintain the laboratory's applications through collaboration with members of care teams, operational leaders, technical team members and other relevant stakeholders.
  • Research, analyze, troubleshoot and correct system components in a timely manner. Translate workflow requirements into efficient and effective application solutions that align with the organization's strategic goals and objectives.
  • Takes initiative to lead and coordinate projects across laboratory applications as a subject matter expert by defining requirements for changing new & existing systems in alignment with department and organization priorities. Works with teams to define process flows & make recommendations for the most efficient utilization of applications.
  • Maintain, analyze, and optimize tools to meet and ensure the organizations quality assurance goals. Takes initiative and leads initiatives to ensure system reliability and maintain system integrity
  • Participates in on-call and monthly maintenance activities
Education Qualifications
  • Bachelor's Degree from an accredited college or university in Information Technology, medical profession (Medical Laboratory Scientist), or related field, experience may be substituted for education is required
  • Graduate of the emerging leaders program or leadership certification from a national organization preferred
Experience Qualifications
  • Minimum 4 years' experience in EPIC Beaker, laboratory field, Data Innovation rule build, EPIC Beaker Clinical Pathology required
Skills and Abilities
  • Strong technical knowledge of Information Technology, focusing on laboratory application development and support.
  • Must be able to demonstrate a basic knowledge of graphics software, networks, hardware and operating systems
  • Skill in use of MS Office applications.
  • Strong leadership skills and the ability to act as a leader within the team, coordinating multiple projects at once and collaborating activities within the team.
  • Demonstrated ability to act as a coaching mentor to application analysts to help develop analysis framework and knowledge of information processes using industry standard techniques
  • Ability to be self-directed, with minimum supervision, and strong attention to detail required
Licenses and Certifications
  • Incumbents with a professional license must possess and maintain a current/valid license in the state of Nebraska or compact state license (i.e. ASCP, RN, RT, MA etc.) preferred
  • Job related accreditation(s)/certification(s)in Epic Beaker Clinical Pathology required
  • Certification in Data Innovations required

Children's is the very best for kids and the very best for your career! At Children's, we put YOU first so together, we can improve the life of every child!

Job Identification 24372

Job Category Information Technology

Locations 84th St. and West Dodge Road, Omaha, NE, 68114, US


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