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44 Benchling Software Engineer Jobs Hiring Near You

Benchling

Engineering Leader, Notebook

San Francisco, CA · On-site

$195.90K - $265.05K/yr

Benchling is the AI platform for biotech R&D. Scientists use Benchling to design experiments ... a software engineer, with experience as a technical lead on projects that involve multiple ...

Benchling

Agentic AI Engineer

San Francisco, CA · On-site

$176K - $265K/yr

Come help us bring modern software to modern science. Benchling is building Intelligence Engineering & Enablement, a small autonomous team within our Security & IT organization. We own three things ...

Benchling

Engineering Leader, Notebook

San Francisco, CA · On-site

$120.80K - $159.10K/yr

Benchling is the AI platform for biotech R&D. Scientists use Benchling to design experiments ... a software engineer, with experience as a technical lead on projects that involve multiple ...

Benchling

Engineering Leader, Infrastructure

San Francisco, CA · Hybrid

$126.70K - $166.10K/yr

Benchling is the AI platform for biotech R&D. Scientists use Benchling to design experiments ... We're specifically looking for a leader with a software engineering and infrastructure background ...

Benchling

Agentic AI Engineer

San Francisco, CA · On-site

Come help us bring modern software to modern science. Benchling is building Intelligence Engineering & Enablement, a small autonomous team within our Security & IT organization. We own three things ...

Benchling

Agentic AI Engineer

$176K - $265K/yr

Come help us bring modern software to modern science. Benchling is building Intelligence Engineering & Enablement, a small autonomous team within our Security & IT organization. We own three things ...

Benchling

Implementation Manager

San Francisco, CA · On-site

$116K - $150K/yr

... Biological Engineering or a related field. Advanced degrees preferred. * At least 2 years of ... Experience using Benchling, especially if you've been a Benchling administrator. * Software ...

Benchling

Enterprise Solutions Architect

Boston, MA · On-site

$154K - $208K/yr

... software systems to partner with Benchling's customers in driving the biotech revolution forward ... Support Sales and Marketing in technical deal strategy, and engage with Engineering, Product, and ...

Benchling

Implementation Manager

San Francisco, CA · Hybrid

... Biological Engineering or a related field. Advanced degrees preferred. * At least 2 years of ... Experience using Benchling, especially if you've been a Benchling administrator. * Software ...

Benchling

Enterprise Solutions Architect

Boston, MA · Hybrid

... software systems to partner with Benchling's customers in driving the biotech revolution forward ... Support Sales and Marketing in technical deal strategy, and engage with Engineering, Product, and ...

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What are the key skills and qualifications needed to thrive as a Software Engineer, and why are they important?

To thrive as a Software Engineer, you need strong programming skills, problem-solving abilities, and a degree in computer science or a related field. Familiarity with coding languages (such as Python, Java, or C++), version control systems like Git, and knowledge of software development methodologies are typically required. Excellent teamwork, communication, and adaptability distinguish top performers in this role. These skills ensure efficient, high-quality software development that meets user needs and adapts to technological changes.

What are some common challenges software engineers face when collaborating on large development teams?

Software engineers working on large teams often encounter challenges with communication, code integration, and maintaining consistent coding standards. Coordinating across multiple developers can lead to merge conflicts and misunderstandings about project requirements or priorities. Adopting tools like version control systems, regular code reviews, and clear documentation helps mitigate these issues. Building strong collaboration skills and proactively seeking clarification are key to ensuring smooth teamwork and project success.

What are Software Engineers?

Software Engineers are professionals who design, develop, test, and maintain computer software and systems. They use programming languages, engineering principles, and problem-solving skills to build applications, websites, or software solutions that meet specific needs. Software Engineers may work in a variety of industries, such as technology, finance, healthcare, or entertainment, collaborating with other team members to deliver functional and reliable software. Their role often involves analyzing user requirements, writing code, debugging errors, and continually improving software performance.

What is the difference between Software Engineer vs Software Developer?

AspectSoftware EngineerSoftware Developer
CredentialsBachelor's degree in CS or related field, certificationsBachelor's degree often preferred, certifications optional
Work EnvironmentDesigning, developing, testing, and maintaining software systemsWriting, coding, and implementing software applications
Industry UsageUsed across tech, finance, healthcare, and more for system-level rolesCommonly used in app and web development projects
Search IntentUnderstanding roles, responsibilities, and qualificationsLearning about coding, programming, and project work

While both roles involve software creation, Software Engineers typically focus on designing and architecting complex systems, whereas Software Developers mainly concentrate on coding and building specific applications. The roles often overlap, but the Engineer role may require broader system knowledge and design skills.

What other companies are hiring for Software Engineer jobs?
What are the most popular jobs at Benchling?
What are the most popular categories at Benchling?
Infographic showing various Software Engineer job openings at Benchling in the United States as of May 2026, with employment types broken down into 100% Full Time. Highlights an 66% Physical, 31% Hybrid, and 3% Remote job distribution.
Software Engineer, Full Stack (Enterprise Lifecycle) (High Seniority)

Software Engineer, Full Stack (Enterprise Lifecycle) (High Seniority)

Benchling

San Francisco, CA • On-site

$225.38K - $304.92K/yr

Full-time

Posted yesterday

Job description

We are rebuilding biotech for the AI era.
When a breakthrough is delayed, the world waits. Getting a molecule from discovery to patients, or a crop from lab to field, involves thousands of slow, manual, disconnected steps. AI has the potential to change this, compressing decades of R&D work into years. But that only happens when clean, structured scientific data and AI are built into how science gets done.
Benchling is the AI platform for biotech R&D. Scientists use Benchling to design experiments, capture structured data, and run AI agents and models directly in their workflows. Over 200,000 scientists around the world trust Benchling to power their most important work, from academic labs to Sanofi, Moderna, and more than half of the world's top 50 biopharma.
We're building an AI scientist for our customers. We can't do that if we haven't built the muscle ourselves. AI fluency is the foundation we build on; it's core to how we work, and we're committed to helping every new hire integrate it into their day-to-day. As part of our interview process, you'll complete a brief AI-focused exercise or discussion so we can understand how you think about and use AI to drive impact in your role. Feel free to reference any tools, platforms, or workflows you use today.
ROLE OVERVIEW
The Enterprise Lifecycle team is a newly formed engineering team dedicated to ensuring Benchling's largest customers-internationally recognizable names developing some of the world's most innovative treatments and cures-are successful in regulated environments. Our mission is to help them prove their products are safe for human consumption and navigate complex regulatory processes with confidence and efficiency.
As a Software Engineer on this team, you will be a technical leader responsible for designing and building the critical systems that enterprise customers depend on for regulatory submissions and audits. You will own horizontally impactful systems while directly enabling features that appear in FDA submissions and GxP-regulated workflows. This role sits at the intersection of platform and product work, requiring both deep technical expertise and strong product sense.
Our team values technical excellence, a deep understanding of user needs, and a commitment to building products that make complex scientific work easier and more efficient. If you're excited about solving challenging technical problems that have a meaningful impact on global health and innovation, we'd love to hear from you.
RESPONSIBILITIES
  • Drive the design and development of innovative products and systems that advance Benchling's product and business goals, serving as a technical expert within the team
  • Independently architect and implement solutions to complex, open-ended problems in areas such as comprehensive audit coverage, scalable export systems, document lifecycle management, and regulatory compliance workflows
  • Lead large, sophisticated initiatives spanning multiple quarters, breaking down ambiguous requirements into concrete technical plans and iterative delivery milestones
  • Design for scale and reliability with the future in mind, anticipating technical challenges across our growing enterprise customer base
  • Write exceptionally well-documented, well-tested code that follows company best practices and serves as an example for others
  • Provide technical leadership through code reviews, architectural guidance, and mentorship of engineers across experience levels
  • Partner closely with product management, design, and cross-functional stakeholders to translate customer needs into technical solutions
  • Explore and evaluate opportunities to leverage AI and LLMs to improve compliance workflows, audit reporting, and regulatory navigation for our customers
  • Establish and improve standards of code quality, style, and architecture at the team level
  • Own end-to-end delivery of critical features, from planning and development through deployment, maintenance, and monitoring
  • Collaborate with other teams to ensure our horizontal systems integrate seamlessly and enable product development across the organization

QUALIFICATIONS
  • 8+ years of experience as a software engineer, with demonstrated progression of increasing scope and impact
  • Experience as a technical lead on significant projects involving multiple engineers across multiple quarters
  • Strong experience building backend systems and APIs for cloud-based web applications
  • Solid understanding of frontend development and the ability to build full-stack solutions when needed
  • Proven ability to design scalable, robust software architectures that align with business requirements and long-term maintainability
  • Track record of independently scoping and driving initiative-level work with feature scope and impact across a whole product area or team
  • Excellent written and verbal communication skills, with the ability to produce clear technical designs and articulate complex technical concepts to diverse audiences
  • Demonstrated ability to mentor and develop other engineers, enabling them to be more productive and successful
  • Interest in learning about life sciences. Prior biotech knowledge not required, but enthusiasm to learn is essential
HOW WE WORK
We offer a flexible hybrid work arrangement that prioritizes in-office collaboration. Employees are expected to be on-site 3 days per week (Monday, Tuesday, and Thursday).
#LI-Hybrid
#BI-Hybrid
#LI-GP1
Benchling welcomes everyone.
We believe diversity enriches our team so we hire people with a wide range of identities, backgrounds, and experiences.
We are an equal opportunity employer. That means we don't discriminate on the basis of race, religion, color, national origin, gender, sexual orientation, age, marital status, veteran status, or disability status. We also consider for employment qualified applicants with arrest and conviction records, consistent with applicable federal, state and local law, including but not limited to the San Francisco Fair Chance Ordinance.

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