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Temporary Bioinformatics Software Engineer Jobs (NOW HIRING)

BCC-NIH

Software Developer (C++, Python)

Bethesda, MD · On-site +1

Overview Black Canyon Consulting (BCC) is searching for a Software Developer in Bioinformatics and Big Data to support our work at the National Institutes of Health. This opportunity is full time and ...

BCC-NIH

Software Developer (C++, Python)

Bethesda, MD · On-site

Overview Black Canyon Consulting (BCC) is searching for a Software Developer in Bioinformatics and Big Data to support our work at the National Institutes of Health. This opportunity is full time and ...

Axle

Bioinformatics Engineer

Rockville, MD

With experts in biomedical science, software engineering, and program management, we focus on ... Axle is seeking a Bioinformatics Engineer to join our vibrant team at the National Institutes of ...

Axle

Bioinformatics Engineer

Rockville, MD · On-site

With experts in biomedical science, software engineering, and program management, we focus on ... Axle is seeking a Bioinformatics Engineer to join our vibrant team at the National Institutes of ...

Axle

Bioinformatics Engineer

Rockville, MD

With experts in biomedical science, software engineering, and program management, we focus on ... Axle is seeking a Bioinformatics Engineer to join our vibrant team at the National Institutes of ...

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All JobsTemporary Bioinformatics Software Engineer Jobs

Temporary Bioinformatics Software Engineer information

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$43K

$131.1K

$238.5K

How much do temporary bioinformatics software engineer jobs pay per year?

As of Jun 28, 2026, the average yearly pay for temporary bioinformatics software engineer in the United States is $131,053.00, according to ZipRecruiter salary data. Most workers in this role earn between $96,000.00 and $157,000.00 per year, depending on experience, location, and employer.

What is the difference between Temporary Bioinformatics Software Engineer vs Bioinformatics Data Analyst?

AspectTemporary Bioinformatics Software EngineerBioinformatics Data Analyst
CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related fieldBachelor's or Master's in Bioinformatics, Biology, or related field
Work EnvironmentProject-based, software development teams, research labsData interpretation, reporting, research teams
Industry UsageBiotech, pharma, research institutionsHealthcare, research, biotech

Temporary Bioinformatics Software Engineers focus on developing and maintaining bioinformatics tools and pipelines, often working in software development environments. Bioinformatics Data Analysts primarily interpret and analyze biological data, providing insights for research or clinical decisions. While both roles require bioinformatics knowledge, their core responsibilities and work settings differ.

What types of projects and collaborations can a Temporary Bioinformatics Software Engineer expect to be involved in?

As a Temporary Bioinformatics Software Engineer, you will typically work on short-term projects such as developing or maintaining data analysis pipelines, optimizing algorithms for genomic data processing, or integrating software tools with laboratory information management systems. Collaboration is frequent with research scientists, data analysts, and other engineers, often through agile project teams or cross-functional meetings. The fast-paced nature of temporary roles means you’ll need to quickly adapt to new codebases, contribute to ongoing research, and communicate technical findings effectively. This can be a great opportunity to build specialized skills, expand your professional network, and gain exposure to the latest advancements in bioinformatics.

What are the key skills and qualifications needed to thrive as a Temporary Bioinformatics Software Engineer, and why are they important?

To thrive as a Temporary Bioinformatics Software Engineer, you need a solid background in computer science, biology, and programming languages such as Python, R, or Java, often with a degree in bioinformatics or a related field. Familiarity with bioinformatics tools, databases (e.g., BLAST, Ensembl), and experience using version control systems like Git are typically required. Strong analytical thinking, adaptability, and effective communication are crucial for collaborating with multidisciplinary teams and handling changing project needs. These skills enable efficient development and maintenance of software solutions that support complex biological data analysis in a fast-paced, project-driven environment.

What does a Temporary Bioinformatics Software Engineer do?

A Temporary Bioinformatics Software Engineer develops and maintains software tools and applications used in biological and genomic research, typically for a specific short-term project or to cover a staffing gap. They collaborate with scientists to analyze data, automate workflows, and ensure the accuracy of computational methods. Their work often involves writing code, managing databases, and troubleshooting technical issues related to the processing of biological data. Temporary roles usually focus on delivering specific features or supporting research within a defined timeframe.
More about Temporary Bioinformatics Software Engineer jobs
What cities are hiring for Temporary Bioinformatics Software Engineer jobs? Cities with the most Temporary Bioinformatics Software Engineer job openings:
What are the most commonly searched types of Bioinformatics Software Engineer jobs? The most popular types of Bioinformatics Software Engineer jobs are:
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Temporary Bioinformatics Software Engineer jobs near you
Infographic showing various Temporary Bioinformatics Software Engineer job openings in the United States as of June 2026, with employment types broken down into 28% Full Time, 70% Part Time, and 2% Contract. Highlights an 99% Physical, and 1% Remote job distribution, with an average salary of $131,053 per year, or $63 per hour.
Bioinformatics Software Engineer II, Pathology and Lab Medicine

Bioinformatics Software Engineer II, Pathology and Lab Medicine

Memorial Sloan Kettering Cancer Center

New York, NY • On-site

$100K - $161K/yr

Full-time

Posted 16 days ago

Memorial Sloan Kettering Cancer Center rating

8.5

Company rating: 8.5 out of 10

Based on 133 frontline employees who took The Breakroom Quiz

18th of 877 rated healthcare providers

Job description

About Us:
The people of Memorial Sloan Kettering Cancer Center (MSK) are united by a singular mission: ending cancer for life. Our specialized care teams provide personalized, compassionate, expert care to patients of all ages. Informed by basic research done at our Sloan Kettering Institute, scientists across MSK collaborate to conduct innovative translational and clinical research that is driving a revolution in our understanding of cancer as a disease and improving the ability to prevent, diagnose, and treat it. MSK is dedicated to training the next generation of scientists and clinicians, who go on to pursue our mission at MSK and around the globe.
Exciting Opportunity at MSK! Our Pathology and Laboratory Medicine Department is looking for a Bioinformatics Software Engineer to join a dynamic team supporting state-of-the-art molecular diagnostics and cancer genomics programs. You will play a key role in developing software tools, web applications, and data workflows that empower our clinicians and researchers to interpret complex genomic information and advance precision oncology.
Role Overview
• Build web applications and APIs that enable genomic data visualization and clinical reporting
• Collaborate closely with bioinformaticians, laboratory scientists, researchers, and clinicians to translate workflow needs into robust software solutions
• Develop, optimize, and maintain computational workflows for NGS data processing
• Improve performance, scalability, and reliability of existing pipelines and tools
• Ensure data quality, reproducibility, and proper documentation across all projects
Key Qualifications
• BS in Bioinformatics, Computer Science, or related field + 5 years of experience OR MS in Bioinformatics, Computer Science, or related field + 2 years of experience
• Strong programming skills in Python
• Experience in web development (e.g., Flask, Django, React)
• Experience with relational databases (PostgreSQL, MySQL) and/or NoSQL (MongoDB)
• Hands-on experience with containerization (Docker, Kubernetes)
• Familiarity with version control (Git/GitHub) and CI/CD workflows
• Understanding of NGS data analysis workflows
• Strong debugging, analytical, and problem-solving skills
Preferred:
• Experience with cloud computing (AWS, GCP, or Azure)
• Knowledge of cancer genomics, variant calling, and annotation
Core Skills
• Ability to translate scientific and clinical needs into maintainable, well-designed software
• Strong communication skills and comfort collaborating with multidisciplinary teams
• Ability to work in fast-paced research and clinical environments
• Commitment to reproducible, traceable, and well-documented work
Additional Information
• Schedule: hybrid, at least 2 days a week in office, must reside in the NYC metro area
• Location: Joy Building, 321 E 61st Street, NYC
• Reporting to: Manager, Bioinformatics Pathology and Laboratory Medicine
Helpful Links:
  • Compensation Philosophy
  • Benefits

Pay Range: $100,600.00 - $161,000.00
FSLA Status: Exempt
Closing:
At MSK, we believe in fair, competitive pay that reflects your job, experience, and skills.
MSK is an equal opportunity and affirmative action employer committed to diversity and inclusion in all aspects of recruiting and employment. All qualified individuals are encouraged to apply and will receive consideration without regard to race, color, gender, gender identity or expression, sexual orientation, national origin, age, religion, creed, disability, veteran status or any other factor which cannot lawfully be used as a basis for an employment decision.
Federal law requires employers to provide reasonable accommodation to qualified individuals with disabilities. Please tell us if you require a reasonable accommodation to apply for a job or to perform your job. Examples of reasonable accommodation include making a change to the application process or work procedures, providing documents in an alternate format, using a sign language interpreter, or using specialized equipment.

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