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Senior Software Engineer Secret Clearance Jobs (NOW HIRING)

Bowhead

Software Engineer

Crane, IN

The Senior Software Engineer will research, design, develop and test operating systems level ... Current Secret clearance holder are highly encouraged to apply. US Citizenship is a requirement for ...

CPMC LLC

Software Engineer (SECRET)

San Diego, CA · On-site

Mid-Level and Senior-Level Clearance: Active Security Clearance (Secret or higher) is preferred Overview: CPMC, LLC is seeking creative and skilled Software Engineer to join our team for an ...

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Senior Software Engineer Secret Clearance information

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How much do senior software engineer secret clearance jobs pay per year?

As of Jun 13, 2026, the average yearly pay for senior software engineer secret clearance in the United States is $143,292.00, according to ZipRecruiter salary data. Most workers in this role earn between $122,500.00 and $161,500.00 per year, depending on experience, location, and employer.

What is a Senior Software Engineer with Secret Clearance?

A Senior Software Engineer with Secret Clearance is an experienced software developer who has been granted access to classified information by the government. This role typically involves designing, developing, and maintaining complex software systems for organizations that require high levels of security, such as defense contractors or government agencies. The 'Secret Clearance' indicates that the engineer has passed a background investigation and is trusted to handle sensitive information that could impact national security if disclosed. In addition to technical skills, this position requires a strong understanding of security protocols and compliance standards.

What are some unique challenges Senior Software Engineers with Secret Clearance may face in their daily work?

Senior Software Engineers with Secret Clearance often work on highly sensitive projects that require strict adherence to security protocols, which can affect how code is developed, tested, and deployed. Collaboration may be limited to cleared team members and internal stakeholders, and access to certain tools or resources can be restricted for security reasons. Additionally, documentation and communication must be handled with extra care to prevent unauthorized information disclosure, making attention to detail and discretion essential for success in this role.

What are the key skills and qualifications needed to thrive as a Senior Software Engineer with Secret Clearance, and why are they important?

To thrive as a Senior Software Engineer with Secret Clearance, you need expertise in software development, systems architecture, and problem-solving, typically supported by a bachelor’s degree in computer science or a related field and active Secret security clearance. Proficiency with programming languages (such as Java, C++, or Python), development tools, and secure coding practices—along with familiarity with configuration management and CI/CD systems—is expected. Strong communication, leadership, and collaboration skills help you effectively guide teams and interact with stakeholders in sensitive environments. These competencies ensure secure, high-quality software delivery and compliance with government standards in mission-critical projects.

What is the difference between Senior Software Engineer Secret Clearance vs Software Engineer Secret Clearance?

AspectSenior Software Engineer Secret ClearanceSoftware Engineer Secret Clearance
Required CredentialsBachelor's degree in CS or related field, experience, security clearanceBachelor's degree in CS or related field, security clearance
Work EnvironmentAdvanced projects, leadership roles, complex problem-solvingDevelopment tasks, coding, testing, support roles
Employer & IndustryDefense contractors, government agencies, aerospaceDefense contractors, government agencies, aerospace
Search & Comparison IntentUnderstanding senior-level roles with clearanceEntry to mid-level roles with clearance

The main difference between a Senior Software Engineer Secret Clearance and a Software Engineer Secret Clearance lies in experience, responsibilities, and project complexity. Senior roles typically involve leadership, complex problem-solving, and mentorship, while standard roles focus on development and support tasks. Both positions require security clearance and work within similar industries, but the senior position demands more experience and strategic input.

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Senior Software Engineer Secret Clearance jobs near you
Sr. Software Engineer with Security Clearance

Sr. Software Engineer with Security Clearance

Lynx Software Technologies Inc

Huntsville, AL • On-site

$121K - $160K/yr

Other

Medical, Dental, Vision, Retirement, PTO

Posted 11 days ago

Job description

Job Title: Sr. Software Engineer Location : Onsite - Huntsville, AL Salary Range: $120,000 - $160,000 + Bonus Eligible Security Clearance: Active Secret Clearance Required This position requires full time onsite in Huntsville, Alabama. Who we are: Founded in 2004 with locations in Atlanta, GA, Fort Worth, TX, Denver, CO, & Huntsville, AL, Thompson Software Solutions (TSS) is a mission-driven aerospace and defense software and systems engineering company supporting the U.S.

military, defense primes, and commercial space partners. We specialize in the development, integration, test, and deployment of safety & mission-critical software systems that power next-generation aircraft, defense platforms, and space technologies. Our team understands what it takes to modernize complex embedded systems while maintaining the rigor, compliance, and reliability required for mission and safety-critical environments.

As a defense-focused company of highly skilled and dedicated engineers, we take pride in solving complex technical challenges that directly impact national security and operational readiness. We partner closely with customers across the military aviation and space domains to deliver resilient, future-ready solutions with portability, sustainability, and long-term mission success in mind. Description Thompson Software Solutions is seeking a Sr.

Software Engineer to support the development of embedded flight software capabilities for an advanced missile platform. This role offers the opportunity to lead the design and integration of mission-critical software operating in high-performance, real-time environments where precision, reliability, and deterministic execution are paramount. This position requires a software engineer to use a wide application of technical principles, theories, and concepts in the software field to develop, integrate, and test software products.

The successful candidate will be a member of a high-performing multi-site team and must be self-motivated with a strong work ethic, time-management, and interpersonal skills. In this role, you will work independently at times on projects, at other times will be in a collaborative team environment with other software engineers, as well as other program development and deployment teams. Selected applicants will be subject to a government security investigation and must meet eligibility requirements for access to classified information.

Continued eligibility for access to classified information is required throughout employment, as dictated by program needs . Basic Requirements • Bachelor's degree in STEM discipline • 5+ years of embedded software development • Experience developing embedded software in C/C++ • Experience with I&T integration and test. • Experience with Full Lifecycle Software Development • Experience with (FSW) Flight software engineering • Proficient with Linux and Windows development environments • Ability to professionally communicate project status and collaborate on technical solutions with clients and peers • Active Secret Clearance Required • Ability to work onsite 100% • Ability to travel 10% Preferred / Additional Skills • Proficient with Atlassian Tools (Confluence, JIRA, Bitbucket, etc.) • Proficient in Python development • Familiarity with Model-Based System Engineering (MBSE) concepts and tools (Cameo, AADL) • Experience with safety-critical software development and practices (DO-178C) • Experience with Guidance, Navigation and Control Implementation • Experience with Signal Processing Implementation • Experience developing Embedded Flight Software • Experience communicating and documenting complex technical designs • Ability to work in a collaborative and team-based environment • Excellent written and verbal communication and presentation skills Sound Exciting?

Get in touch today! We have very robust benefits including: * Low-cost Medical / Dental / Vision coverage options * 401K with generous employer match * Responsible Paid Time Off + Paid Holidays * Remote work opportunities based on role * Employee Assistance Program (EAP) * Career growth and professional development opportunities All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, or veteran status. #CJ

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