1

Senior Financial Systems Analyst Jobs in Rochester, MN

Systems Analyst-FAS-Hybrid

Rochester, MN · Hybrid

$84K - $113K/yr

Working with Business Analysts and finance process owners, the Systems Analyst converts documented workflows and requirements into reliable production automations and agentic solutions. This role ...

Systems Analyst-FAS-Hybrid

Rochester, MN · Hybrid

$87K - $118K/yr

Working with Business Analysts and finance process owners, the Systems Analyst converts documented workflows and requirements into reliable production automations and agentic solutions. This role ...

Working with Business Analysts and finance process owners, the Systems Analyst converts documented workflows and requirements into reliable production automations and agentic solutions. This role ...

Job#: 3038867 IT Systems Analyst Location: Rochester, Minnesota (Remote) Role Overview This ... layer of financial protection. We offer an ESPP (employee stock purchase program) and a 401K ...

Operating at the intersection of finance and data, you will build automated reporting systems ... for stakeholders and senior management. * Collaborate with product and engineering teams to ...

Senior Systems Engineer

Rochester, MN · On-site

$106K - $145K/yr

To be considered for the Senior Systems Engineer position, you must meet the following requirements ... workflow analysis, staffing analysis, process engineering, systems analysis, leadership ...

Senior Systems Engineer

Rochester, MN · On-site

$106K - $145K/yr

To be considered for the Senior Systems Engineer position, you must meet the following requirements ... workflow analysis, staffing analysis, process engineering, systems analysis, leadership ...

Senior Systems Engineer

Rochester, MN · On-site

$106K - $145K/yr

Qualifications To be considered for the Senior Systems Engineer position, you must meet the ... workflow analysis, staffing analysis, process engineering, systems analysis, leadership ...

Senior Systems Engineer

Rochester, MN · Hybrid

$93K - $140K/yr

... workflow analysis, staffing analysis, process engineering, systems analysis, leadership ... To be considered for the Senior Systems Engineer position, you must meet the following requirements:

Uses reporting tools to develop management financial information. May develop expertise and/or ... Prefer knowledge of large accounting and/or grant management systems. Ability to work in a team ...

Uses reporting tools to develop management financial information. May develop expertise and/or ... Prefer knowledge of large accounting and/or grant management systems. Ability to work in a team ...

next page

Showing results 1-20

Senior Financial Systems Analyst information

See Rochester, MN salary details

$55.9K

$98K

$123K

How much do senior financial systems analyst jobs pay per year?

As of Aug 17, 2026, the average yearly pay for senior financial systems analyst in Rochester, MN is $98,013.00, according to ZipRecruiter salary data. Most workers in this role earn between $86,900.00 and $108,300.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a senior financial systems analyst?

To thrive as a Senior Financial Systems Analyst, you need a deep understanding of accounting principles, financial analysis, and systems implementation, often backed by a bachelor’s degree in finance, accounting, or information systems. Expertise in ERP platforms (like SAP or Oracle), advanced Excel skills, and certifications such as CFA or CPA are commonly required. Strong analytical thinking, problem-solving ability, and effective communication help bridge gaps between technical teams and financial stakeholders. These skills are vital for optimizing financial processes, ensuring data integrity, and supporting strategic business decisions.

What are some common challenges faced by senior financial systems analysts when integrating new financial software into existing company processes?

Senior Financial Systems Analysts often encounter challenges such as ensuring data integrity during migration, aligning new systems with established business processes, and managing stakeholder expectations. They must coordinate closely with IT, finance, and end-users to troubleshoot technical issues and provide training. Successfully addressing these challenges requires strong project management skills, clear communication, and a deep understanding of both legacy and new systems.

What is the difference between Senior Financial Systems Analyst vs Financial Systems Analyst?

AspectSenior Financial Systems AnalystFinancial Systems Analyst
Required CredentialsBachelor's degree, often with certifications like CFA or CPABachelor's degree, sometimes with entry-level certifications
Work EnvironmentMid to large organizations, financial departments, project managementFinancial departments, support roles, data analysis
Employer & Industry UsageBanking, investment firms, corporate financeSimilar industries, often entry-level or supporting roles
Common Search & ComparisonMore experienced, leadership responsibilitiesEntry to mid-level, support-focused

The main difference between a Senior Financial Systems Analyst and a Financial Systems Analyst lies in experience, responsibilities, and expertise. Senior analysts typically have more advanced skills, leadership roles, and industry certifications, while financial analysts focus on supporting tasks and data analysis. Both roles are vital in financial organizations, but the senior position involves greater strategic involvement and decision-making.

What job categories do people searching Senior Financial Systems Analyst jobs in Rochester, MN look for?

The top searched job categories for Senior Financial Systems Analyst jobs in Rochester, MN are:

What cities near Rochester, MN are hiring for Senior Financial Systems Analyst jobs?

Cities near Rochester, MN with the most Senior Financial Systems Analyst job openings:

Systems Analyst-FAS-Hybrid

Mayo Clinic

Rochester, MN • Hybrid

$84K - $113K/yr

Full-time

Medical, Dental, Vision, Retirement

Re-posted 3 days ago


Mayo Clinic rating

7.8

Company rating: 7.8 out of 10

Based on 699 frontline employees who took The Breakroom Quiz

128th of 887 rated healthcare providers


Job description

HYBRID: This is a hybrid position and must be located within 100 miles of any of the Mayo Clinic campuses for on-site expectations based on business needs. 
 

This role builds, configures, and supports intelligent automation and traditional RPA solutions that streamline high-value Finance and Accounting Services automation opportunities across UiPath, Copilot Studio, Power Automate, Oracle Agent Studio, and possibly other tools including Claude and Codex. Working with Business Analysts and finance process owners, the Systems Analyst converts documented workflows and requirements into reliable production automations and agentic solutions. This role leads development, testing, deployment, monitoring, and support to ensure solutions are dependable, scalable, and aligned to Finance needs.

The Systems Analyst plays a key role in the management and support of Finance system solutions. To be successful in this role, this individual will:
be a liaison between Finance personnel and automation tools and technology to provide systems support, education and training, data reporting, analysis, automation, and complex project management in-order-to leverage technology solutions to meet the needs of Finance. 
stay abreast of current industry trends, responsible for data acquisition and analysis, development of recommendations, and management of solution implementation. 
maintain an in-depth knowledge of Mayo accounting systems and processes, including an expert level understanding of their interrelationship and dependencies and knowledge of their underlying data structures.
assure the integrity of financial and statistical data, via preparation and/or review of site or Enterprise systems' processes, testing, and reporting. This includes the initiation, management and troubleshooting of complex technical issues and needed system changes having institutional impact including business/systems needs identification, functional specification development, business impact analysis, test plan development, testing, communication, and final documentation. 
develop business relationships with outside consultants, vendors, healthcare clearinghouses, national standards committees, and representatives of other healthcare institutions.
demonstrate commitment to equity, inclusion, and diversity in leading, recruiting and developing others.

Why Mayo Clinic

Mayo Clinic is top-ranked in more specialties than any other care provider according to U.S. News & World Report. As we work together to put the needs of the patient first, we are also dedicated to our employees, investing in competitive compensation and comprehensive benefit plans - to take care of you and your family, now and in the future. And with continuing education and advancement opportunities at every turn, you can build a long, successful career with Mayo Clinic.

Benefits Highlights
  • Medical: Multiple plan options.
  • Dental: Delta Dental or reimbursement account for flexible coverage.
  • Vision: Affordable plan with national network.
  • Pre-Tax Savings: HSA and FSAs for eligible expenses.
  • Retirement: Competitive retirement package to secure your future.
Just as our reputation has spread beyond our Minnesota roots, so have our locations. Today, our employees are located at our three major campuses in Phoenix/Scottsdale, Arizona, Jacksonville, Florida, Rochester, Minnesota, and at Mayo Clinic Health System campuses throughout Midwestern communities, and at our international locations. Each Mayo Clinic location is a special place where our employees thrive in both their work and personal lives. Learn more about what each unique Mayo Clinic campus has to offer, and where your best fit is. 

Equal Opportunity

All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, gender identity, sexual orientation, national origin, protected veteran status or disability status. Learn more about the "EOE is the Law".  Mayo Clinic participates in E-Verify and may provide the Social Security Administration and, if necessary, the Department of Homeland Security with information from each new employee's Form I-9 to confirm work authorization.

A Bachelor's degree and 5 years' experience in accounting, supply chain management, business, healthcare, finance, computer science, or engineering and a minimum of 3 years' experience focused on support, configuration, or implementation of an integrated system, automation, or other technology related field 

OR 

High school diploma and 9 years' experience focused on support, configuration, or implementation in support of finance related systems such as a costing system, ERP system (Enterprise resource planning), etc.


Ability to work in multiple system environments and applications
Proficient in use of project efficiency tools, automation, and code writing. 
Direct hands-on experience with ad hoc query programs, automated testing tools, and reporting software required. 
Proven investigational skills, attention to detail, accuracy, and ability to manage and prioritize multiple tasks.
Proven ability to successfully manage projects of moderate complexity impacting multiple systems or departments.
Must possess in-depth knowledge of core functionality and supporting processes. Experience in health care accounting preferred. Must exhibit diplomacy, tact, initiative, and organizational skills. Must possess ability to inspire trust and confidence, communicate effectively with internal and external audiences and demonstrate ability to maintain outstanding customer relations. Requires individual who is self-directed, can effectively multi-task, thrives in an unstructured environment, and handles ambiguity well.

**This vacancy is not eligible for sponsorship / we will not sponsor or transfer visas for this position.  


What Mayo Clinic employees say

Pay

Benefits

Hours and flexibility

Workplace

Get the full story on Breakroom


Mayo Clinic logo

About Mayo Clinic

Sourced by ZipRecruiter

Mayo Clinic is the largest integrated, not-for-profit medical group practice in the world. We're building the future, one where the best possible care is available to everyone — and more people can heal at home. Our relentless research turns into earlier diagnoses and new cures. That's how we inspire hope in those who need it most. At Mayo Clinic, experts work together to solve the most challenging unmet needs of patients. Our history of innovation dates back almost 150 years, when brothers Will and Charlie Mayo pioneered an integrated, team-based approach to medicine. Today, that trailblazing spirit drives innovations like Mayo Clinic Platform — which powers new technologies to change how care is delivered to all.

Industry

Hospitals

Company size

10,000+ Employees

Headquarters location

Rochester, MN, US

Year founded

1919