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Senior Bioinformatics Software Engineer Jobs in Wisconsin

WI · On-site

$100 - $140/hr

As a Senior Software Engineer at PQShield, you will be designing and developing secure solutions, helping to develop software solutions working seamlessly through the entire software development life ...

New

Senior Software Engineer

Milwaukee, WI

$120K - $159K/yr

In the Senior Software Engineer position, you'll lead the development of intelligent, adaptive, and scalable applications by leveraging AI-powered development tools, machine learning models, and ...

Senior Software Engineer

Milwaukee, WI · On-site

$120K - $159K/yr

In the Senior Software Engineer position, you'll lead the development of intelligent, adaptive, and scalable applications by leveraging AI-powered development tools, machine learning models, and ...

Trissential is hiring a Senior PHP Software Engineer to join our client's team. This is an opportunity to work on high-impact eCommerce and ERP integrations, contribute across the full application ...

New

Trissential is hiring a Senior PHP Software Engineer to join our client's team. This is an opportunity to work on high-impact eCommerce and ERP integrations, contribute across the full application ...

New

Senior Software Engineer

Stevens Point, WI · On-site +1

$119K - $156K/yr

The Senior Software Engineer develops, creates, and modifies general computer applications software or specialized utility programs. They analyze user needs and develop software solutions. They will ...

Sr. Software Engineer

Waukesha, WI · On-site

$122K - $161K/yr

GE HealthCare is shaping the next generation of MR scanner technology, seeking a Senior Software Engineer. This role involves designing, developing, and testing software components in a collaborative ...

Senior Software Engineer

Madison, WI · On-site

$123K - $162K/yr

As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity in a wide range of technical areas. This role will have a lead role in the design, development, and ...

Senior Software Engineer

Madison, WI · On-site

$123K - $162K/yr

As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity in a wide range of technical areas. This role will have a lead role in the design, development, and ...

Senior Software Engineer

Madison, WI · On-site

$123K - $162K/yr

As a Sr. Software Engineer, this seasoned professional will demonstrate competence and creativity in a wide range of technical areas. This role will have a lead role in the design, development, and ...

WI · On-site

$95.30 - $158.80/hr

Mentor less-senior software developers on development methodologies and optimization techniques. * All other duties as assigned. U.S. National Base Pay Range: $95,300 - $158,800. Geographic ...

New

Senior Software Engineer

Waukesha, WI · On-site

$122K - $161K/yr

Summary As a Senior Software Engineer, you will own the design, development, and delivery of next-generation compute solutions for Magnetic Resonance Imaging (MRI) scanners. Working across global ...

Senior Software Engineer

Waukesha, WI · On-site

$122K - $161K/yr

Summary As a Senior Software Engineer, you will own the design, development, and delivery of nextgeneration compute solutions for Magnetic Resonance Imaging (MRI) scanners. Working across global ...

Senior Software Engineer

Madison, WI · On-site

$100 - $144/hr

Resource Innovations is seeking Senior Software Engineer to join our growing Software as a Service (SaaS) team. As a hands‑on technical lead at Resource Innovations, you will be instrumental in the ...

New

Senior Software Engineer

Chicago, IL · On-site +1

$126K - $166K/yr

Resource Innovations is seeking Senior Software Engineer to join our growing Software as a Service (SaaS) team. As a hands-on technical lead at Resource Innovations, you will be instrumental in the ...

Senior Software Engineer

Madison, WI · On-site

$123K - $162K/yr

Resource Innovations is seeking Senior Software Engineer to join our growing Software as a Service (SaaS) team. As a hands-on technical lead at Resource Innovations, you will be instrumental in the ...

Senior Embedded Software Engineer - Automotive Systems Location: Milwaukee, WI Duration: Long Term Client: Clarios & Skill Requirement: * Automotive or other safety-critical experience with 8+ years ...

Senior Staff Software Engineer

Madison, WI · On-site

$123K - $162K/yr

As a Senior Staff Software Engineer, you will enhance the platform by leading engineering efforts, mentoring junior engineers, and collaborating across teams to deliver high-quality products that ...

Senior Staff Software Engineer

Madison, WI · On-site

$123K - $162K/yr

As a Senior Staff Software Engineer, you will lead engineering efforts, collaborate with cross-functional teams, and mentor junior engineers to enhance the platform that integrates social services ...

Showing results 41-60

Senior Bioinformatics Software Engineer information

See Wisconsin salary details

$85.3K

$103.2K

$120.6K

How much do senior bioinformatics software engineer jobs pay per year?

As of Aug 8, 2026, the average yearly pay for senior bioinformatics software engineer in Wisconsin is $103,228.00, according to ZipRecruiter salary data. Most workers in this role earn between $95,400.00 and $111,000.00 per year, depending on experience, location, and employer.

What are the key skills and qualifications needed to thrive as a senior bioinformatics software engineer?

To thrive as a Senior Bioinformatics Software Engineer, you need a strong background in computer science, biology, and data analysis, often supported by an advanced degree in bioinformatics or a related field. Expertise with programming languages (such as Python, R, or Java), cloud computing, bioinformatics tools, and version control systems is typically required, along with experience using databases and relevant software frameworks. Strong problem-solving skills, collaboration, and effective communication are crucial soft skills for working with multidisciplinary teams and presenting complex data. These combined skills enable the effective development and maintenance of robust software tools that support cutting-edge biological research and data-driven discoveries.

How does a senior bioinformatics software engineer typically collaborate with cross-functional teams in a research or clinical setting?

Senior Bioinformatics Software Engineers frequently work alongside biologists, data scientists, and clinicians to develop and maintain computational pipelines for data analysis. They play a key role in translating complex biological questions into scalable software solutions, often leading code reviews, mentoring junior developers, and ensuring data integrity. Regular meetings and clear communication are vital, as the role requires aligning technical development with scientific goals and regulatory requirements. This collaborative environment offers opportunities to influence project direction and contribute to impactful discoveries.

What does a senior bioinformatics software engineer do?

A Senior Bioinformatics Software Engineer designs, develops, and maintains software tools and pipelines to analyze biological data, such as genomic or proteomic information. They work closely with scientists and researchers to understand data requirements and translate them into efficient, scalable computational solutions. Their responsibilities often include coding, troubleshooting, optimizing algorithms, as well as mentoring junior engineers and contributing to project planning. Senior engineers are expected to have strong programming skills, a solid understanding of bioinformatics concepts, and experience working with large biological datasets.

What is the difference between Senior Bioinformatics Software Engineer vs Bioinformatics Software Engineer?

AspectSenior Bioinformatics Software EngineerBioinformatics Software Engineer
Required CredentialsBachelor's or Master's in Bioinformatics, Computer Science, or related field; experience in software development and bioinformatics toolsBachelor's or Master's in Bioinformatics, Computer Science, or related field; less emphasis on extensive experience
Work EnvironmentResearch labs, biotech companies, healthcare institutions, often leading projectsResearch teams, biotech firms, academic settings, supporting bioinformatics analysis
Employer & Industry UsageUsed in biotech, pharma, healthcare, research institutionsCommon in similar industries, often as entry to mid-level roles

The main difference between a Senior Bioinformatics Software Engineer and a Bioinformatics Software Engineer lies in experience and responsibility. Senior roles typically require more advanced skills, leadership, and project management, while entry-level roles focus on supporting bioinformatics analysis and software development. Both roles are vital in biotech and research industries, but senior positions involve greater oversight and strategic input.

What are the most commonly searched types of Bioinformatics Software Engineer jobs in Wisconsin? The most popular types of Bioinformatics Software Engineer jobs in Wisconsin are:
What are popular job titles related to Senior Bioinformatics Software Engineer jobs in Wisconsin? For Senior Bioinformatics Software Engineer jobs in Wisconsin, the most frequently searched job titles are:
What job categories do people searching Senior Bioinformatics Software Engineer jobs in Wisconsin look for? The top searched job categories for Senior Bioinformatics Software Engineer jobs in Wisconsin are:
What cities in Wisconsin are hiring for Senior Bioinformatics Software Engineer jobs? Cities in Wisconsin with the most Senior Bioinformatics Software Engineer job openings:

$100 - $140/hr

Other

Medical, PTO

Posted 3 days ago

New


Job description

About the role

We are looking for a Cryptography Software Engineer to join our team to help design and implement the next generation of secure Embedded Software implementations of Classic & Post Quantum Cryptography.

We have been established since 2018, so you would be directly working with the founders and inventors of this deep tech startup. The technology is already a couple of years in the making, its feasibility having been established, funding secured, and it has a clear path to market. This is a great opportunity for career progression and to get a head start in a rapidly expanding segment of the semiconductor industry (Post-Quantum Cryptography and RISC-V).

Our platform IP components come together as a RISC-V MCU based Sub-system with advanced (post-quantum) cryptography algorithm support and security features.

As a Senior Software Engineer at PQShield, you will be designing and developing secure solutions, helping to develop software solutions working seamlessly through the entire software development life cycle. You will assist with the development of PQShield's core software cryptography libraries. Responsibilities include developing internal tools to support the build, test and security analysis of PQShield's software products.

What you’ll be doing
  • Design, implement, and test classical and post-quantum cryptographic primitives with a strong emphasis on functional correctness, interoperability, and optimized performance across software environments.
  • Develop and integrate cryptographic solutions on hardware platforms, including FPGA and hardware cryptographic coprocessors, with a focus on acceleration and secure implementation on ARM and RISC-V architectures.
  • Harden cryptographic implementations against side-channel analysis (SCA), fault injection attacks (FIA), and other physical or logical threats through constant-time design and other countermeasures.
  • Ensuring integration with cryptographic system and application API’s, for example: GlobalPlatform, ARM Platform Security Architecture, Linux Kernel drivers
  • Collaborate with cryptographers, security engineers, and cross-functional teams—including hardware, verification, and platform security—to review, validate, and harden cryptographic implementations.
  • Contribute to performance benchmarking and optimization across multiple platforms.
  • Contribute to design and code review meetings to improve cryptographic software quality, architecture, and development processes.
  • Perform and support security-focused code reviews, including static and dynamic analysis, and apply formal methods such as model checking where applicable.
  • Maintain and enhance existing cryptographic software, ensuring robustness, security, and performance across supported platforms.
  • Support compliance with relevant security standards (e.g., FIPS, ISO/IEC, NIST PQC).
  • Participate in threat modeling and risk assessments related to cryptographic software.
Required Skills And Qualifications
  • Master’s or PhD degree in computer science, mathematics, or a related field, with a strong background in cryptography or computer security.
  • Proficiency in C and Assembly, with a focus on resource-constrained, bare-metal environments. Experience with Rust is nice to have.
  • Familiarity with classical and post-quantum cryptographic algorithms, including NIST PQC candidates, and a solid understanding of NIST and FIPS publications and compliance requirements.
  • Excellent problem-solving and debugging skills.
Preferred Skills And Qualifications
  • Experience with secure coding practices and countermeasures against implementation attacks.
  • Solid understanding of side-channel attacks (timing, power, EM), fault attacks, and corresponding mitigation strategies.
  • Hands‑on experience with or working knowledge of security certification frameworks such as FIPS 140‑3, SESIP, PSA Certified, or Common Criteria.
  • Ability to read and implement specifications from cryptographic research papers.
  • 2+ years of professional experience in cryptographic software engineering is preferred; however, we assess seniority primarily based on your depth of knowledge, hands‑on experience, and problem‑solving skills rather than just years worked.
Some of the perks of working with us
  • Unparalleled opportunities to learn and accelerated career development.
  • A collaborative, team environment with people who truly love what they do.
  • Competitive salary and share option scheme.
  • Flexible and hybrid working, and a working from home budget.
  • Private health insurance for yourself and your family.
  • 25 days annual leave (plus bank holidays and two wellness weeks).
  • 50% gym membership discount.
  • The chance to work with a spirited, smart, and friendly team!

PQShield is an Equal Employment Opportunity employer. We’re passionate about talent and proud to foster an inclusive environment; all applicants will be considered regardless of their gender identity, ethnicity, sexual orientation, disability, and age.

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