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Program Analyst Jobs in Madison, WI (NOW HIRING)

SmartIPlace

Business Analyst

Madison, WI · Remote

$35 - $49/hr

Our client is looking to hire a Business Analyst ... This position will assist with other client departments which administers a variety of programs to ...

WPS Health Solutions

Data Analyst

Madison, WI · On-site +1

The Data Analyst is responsible for collecting, processing and analyzing data to provide actionable ... We process claims and provide customer support for beneficiaries of the Medicare program and manage ...

WPS

Data Analyst

Madison, WI · On-site +1

The Data Analyst is responsible for collecting, processing and analyzing data to provide actionable ... We process claims and provide customer support for beneficiaries of the Medicare program and manage ...

CFS

Accounting Analyst

Madison, WI · Hybrid

$60.50K - $79.10K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Madison, WI · Hybrid

$60.50K - $79.10K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Waunakee, WI · Hybrid

$61.40K - $80.30K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Madison, WI · Hybrid

$60.50K - $79.10K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Madison, WI · Hybrid

$60.50K - $79.10K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Verona, WI · Hybrid

$61.40K - $80.30K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Waunakee, WI · Hybrid

$61.40K - $80.30K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

New

Apex Systems

Technical Analyst

Madison, WI · On-site +1

$40 - $60/hr

Job#: 3034202 Technical Analyst Location: Madison, Wisconsin (Remote) Employment Type: Contract to ... We offer an ESPP (employee stock purchase program) and a 401K program which allows you to ...

CFS

Accounting Analyst

Middleton, WI · Hybrid

$61.60K - $80.60K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

CFS

Accounting Analyst

Madison, WI · Hybrid

$60.50K - $79.10K/yr

BONUS Program that PAY'S Historically RESPONSIBILITIES OF THE ACCOUNTING ANALYST: * You will work cross functionally throughout the entire organization as part of the financial reporting team

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All JobsProgram Analyst JobsProgram Analyst Jobs in Madison, WI

Program Analyst information

See Madison, WI salary details

$37.3K

$89.8K

$132.5K

How much do program analyst jobs pay per year?

As of May 30, 2026, the average yearly pay for program analyst in Madison, WI is $89,833.00, according to ZipRecruiter salary data. Most workers in this role earn between $69,500.00 and $116,900.00 per year, depending on experience, location, and employer.

What Is a Program Analyst?

A program analyst is capable of both programming computer languages and analyzing how computer systems work. In this career, you combine these two skills to design and program computer systems that meet the needs of the customers. Your job duties include gathering system requirements, analyzing system functionality, writing programs, and testing the functionality of the software modules. Numerous private sectors and government agencies have program analysts on staff.

What are the key skills and qualifications needed to thrive as a Program Analyst, and why are they important?

To thrive as a Program Analyst, you need strong analytical skills, project management knowledge, and typically a bachelor's degree in business, public administration, or a related field. Familiarity with data analysis tools such as Microsoft Excel, SQL, and project management software like MS Project or Jira is commonly required. Excellent communication, problem-solving abilities, and attention to detail help Program Analysts collaborate effectively and deliver actionable insights. These skills and qualities are vital for evaluating programs, optimizing processes, and supporting organizational decision-making.

How does a Program Analyst typically collaborate with cross-functional teams to achieve project objectives?

Program Analysts frequently work alongside project managers, subject matter experts, and stakeholders from various departments to gather and analyze data, track progress, and recommend process improvements. They serve as a bridge between technical teams and business units, ensuring that program goals are clearly communicated and aligned with organizational priorities. Effective collaboration often involves attending regular meetings, preparing reports, and facilitating discussions to resolve issues and keep projects on track. This teamwork-oriented environment helps Program Analysts develop strong communication and problem-solving skills, which are vital for career advancement.

What are Program Analysts?

Program Analysts are professionals who evaluate, analyze, and improve organizational programs and operations. They collect and interpret data, develop reports, and recommend solutions to enhance program efficiency and effectiveness. Program Analysts often work in government agencies, non-profits, or private companies, collaborating with stakeholders to ensure that programs meet their objectives and comply with relevant regulations. Their work involves both technical analysis and communication skills to support decision-making and organizational improvement.

What is the difference between Program Analyst vs Budget Analyst?

AspectProgram AnalystBudget Analyst
Required CredentialsBachelor's degree in public administration, business, or related field; often certifications like CAP or PMPBachelor's degree in finance, accounting, or related; certifications like CGFM or CPA are common
Work EnvironmentGovernment agencies, nonprofits, or large corporations; focus on program evaluation and improvementGovernment agencies, corporate finance departments; focus on budget planning and monitoring
Employer & Industry UsageUsed in federal, state, and local government, as well as private sectorPrimarily in government and large organizations managing budgets

Program Analysts and Budget Analysts often work in government or large organizations, but their focus differs. Program Analysts evaluate and improve programs, while Budget Analysts manage financial plans. Both roles require similar educational backgrounds and certifications, making them closely related career paths.

More about Program Analyst jobs
What job categories do people searching Program Analyst jobs in Madison, WI look for? The top searched job categories for Program Analyst jobs in Madison, WI are:
What cities near Madison, WI are hiring for Program Analyst jobs? Cities near Madison, WI with the most Program Analyst job openings:
Program Analyst jobs near you
Infographic showing various Program Analyst job openings in Madison, WI as of May 2026, with employment types broken down into 1% Internship, 3% As Needed, 24% Full Time, 61% Part Time, 10% Contract, and 1% Nights. Highlights an 50% Physical, and 50% Remote job distribution, with an average salary of $89,833 per year, or $43.2 per hour.
Total Rewards Analyst

Total Rewards Analyst

MSA Professional Services, Inc.

Madison, WI • On-site

Full-time

Medical, Dental, Vision, Retirement, PTO

This job post has expired 1 day ago. Applications are no longer accepted.

Job description

Overview
MSA is seeking to add a Total Rewards Analyst to our HR Team. This role plays a critical, behind-the-scenes role in shaping MSA's Total Rewards strategy. This position is primarily focused on compensation administration, analysis, and reporting, serving as a key analytical partner to HR leadership.
Who are we looking for? Someone who:
  • Thinks like an analyst first-comfortable working in data, models, and scenarios.
  • Naturally questions assumptions and seeks to validate decisions with data.
  • Able to translate complex analyses into clear, actionable insights for leaders.

This role can be either our Baraboo, Madison, Dubuque or Milwaukee offices with a flexible work environment.
Who we are:
For over 100 years, MSA has helped shape communities through engineering excellence. What began in 1919 with a single practitioner in Baraboo, Wisconsin, has grown into a robust firm of over 500 employee owners across the U.S.
Our purpose is simple: to make communities stronger, safer, and more sustainable. We believe in the power of relationships, trust, and doing the right thing - and we take pride in seeing our work come to life.
At MSA, we understand that great work happens when you contribute great value and maintain a balanced life and career. That's why we offer:
  • Employee Ownership = True Investment: MSA is a 100% employee-owned firm. That means when you join our team, you're not just doing a job - you're building your legacy and sharing in the success of the firm.
  • A Culture of Mentorship and Collaboration: Work alongside a talented, cross-disciplinary team that values mentorship, professional development, and team success.
  • A flex time program that empowers you to manage your schedule - because life doesn't always fit inside 9 to 5
  • A flexible work environment, including hybrid and remote options where possible, to support your productivity and well-being

Responsibilities
What you will do:
Compensation
  • Administer and maintain compensation programs, including salary structures, job architecture, and pay ranges aligned with Total Rewards strategy.
  • Lead data preparation, validation, and analysis for the annual compensation cycle (merit, market adjustments).
  • Conduct internal equity and market analyses to support consistent, competitive pay decisions.
  • Provide analytical support and recommendations for off-cycle compensation requests and pay decisions.
  • Perform financial modeling and scenario analysis to evaluate compensation changes and program impacts.
  • Partner with Talent Acquisition and HR leaders by delivering compensation insights and structured recommendations.
  • Collaborate with external compensation consultants to interpret market data and inform salary grade structures.
Incentives & Total Rewards Reporting
  • Administer incentive programs, including bonus calculations, audits, and reporting outputs.
  • Develop Total Rewards reporting and statements that quantify and communicate program value for leadership use.
Benefits Analysis & Administration
  • Analyze benefits utilization, cost trends, and plan performance to support design recommendations.
  • Conduct financial and impact analysis for new or revised benefit offerings.
  • Support benefits administration processes, including open enrollment system setup and testing.
  • Partner with vendors and brokers to resolve complex issues and evaluate performance.
  • Administer benefit programs (medical, dental, vision, etc)
Compliance & Data Integrity
  • Ensure compliance with applicable regulations (ACA, ERISA, HIPAA, COBRA, FMLA).
  • Partner with HRIS to maintain data accuracy and optimize compensation and benefits system functionality.
  • Develop recurring and ad hoc reports that support executive and HR decision-making.

Qualifications
What you bring:
  • Bachelor's degree in Human Resources, Business, Finance, Data Analytics, or a related field.
  • 5+ years of experience supporting compensation, benefits, HR analytics, or Total Rewards programs.
  • Strong knowledge of compensation practices, including market pricing, salary structure design, and pay equity analysis.
  • Experience analyzing and administering benefits programs, with exposure to self-funded plans and ESOP environments preferred.
  • Advanced Excel and analytical skills, with the ability to interpret trends and build data-driven recommendations.
  • Experience working within HRIS systems and collaborating across teams to enhance Total Rewards processes.
  • Detail-oriented, proactive, and solutions-focused mindset with strong communication and problem-solving abilities.
  • CCP or CBP certification is a plus.
  • The selected candidate must be authorized to work for any employer in the U.S. without requiring visa sponsorship now or in the future. We are unable to provide or take over sponsorship of an employment visa for this role.

Why MSA?
  • Better Together: A collaborative environment that values open ideas, diversity, and authenticity. Our diverse perspectives fuel innovation and success in our employee-owned firm.
  • Multi-disciplinary Opportunities: Follow your interests, explore new experiences, and apply your skills where they have the most impact.
  • We've Got Your Back: Enjoy support when you need it and independence when you don't. We are 400+ strong, working as one cohesive team.
  • Passion & Purpose: We're passionate about our work and proud of it! Share inspirations, "geek out," and think big with us.
  • Pay & Perks: Competitive pay and unique perks that make MSA stand out.
  • Communities of Practice: Our think tanks and idea generators-regular collaboration and learning opportunities.
  • Work-Life Integration: Life doesn't stop when work begins. We support your professional and personal balance.
  • Commitment to Learning: Ongoing training, tuition reimbursement, and cutting-edge technology to keep you connected and creative.
  • Community Engagement: Giving back through volunteering, education, STEM outreach, and event participation, backed by corporate sponsorship and donations.

The salary for this position ranges from $79,081 to $126,500 per year commensurate with experience. Higher compensation within this range will be paid to candidates with significant experience and exceptional qualifications.
Best-in-Industry Benefits - Eligible employees enjoy:
  • Quality Insurance Options: Medical, dental, and vision coverage for you and your family
  • Paid Time Off: Minimum of 17 days in the first year for full-time employees
  • Paid Holidays: 8 holidays per year
  • Paid Parental Leave: 2 weeks for both parents, with additional time for birth parents under MSA's Short Term Paid Leave
  • Supplemental Insurance: 100% paid life, long-term disability, and short-term disability insurance
  • Employee Stock Ownership Plan (ESOP): 100% employee-owned, with stock provided at no cost
  • 401k Retirement Savings Plan: Generous employer match, immediately 100% vested
  • Short Term Incentive (STIP) bonus

MSA is an equal opportunity/affirmative action employer that is committed to diversity and inclusion in the workplace. At MSA, we value a diverse, inclusive workforce and we provide equal employment opportunity for all applicants and employees. All qualified applicants for employment will be considered without regard to an individual's race, color, sex, gender identity, gender expression, religion, age, national origin or ancestry, citizenship, physical or mental disability, medical condition, family care status, marital status, domestic partner status, sexual orientation, genetic information, military or veteran status, or any other basis protected by federal, state or local laws. If you are unable to submit your application because of incompatible assistive technology or a disability, please contact us at hr@msa-ps.com
Equal Employment Opportunity/Affirmative Action Employer

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