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Non Profit Controller Salary Jobs (NOW HIRING)

Nonprofit Controller

Dunwoody, GA · On-site

$120K - $130K/yr

Controller - Atlanta, GA (Perimeter area) Must have experience in the nonprofit industry Salary Range: $120,000 - $130,000 Why This Opportunity Stands Out: • Direct partnership with the CFO/CAO and ...

Controller - Non Profit

Clearwater, FL · On-site

$90K - $99K/yr

PrideStaff is seeking an experienced, mission-minded Non-Profit Controller to lead financial ... Competitive salary based on experience * Comprehensive health, dental, and vision insurance ...

Controller - Nonprofit

Houston, TX · On-site

$90K - $125K/yr

A bit about the role: We're seeking a strategic Nonprofit Controller to lead the quality of client ... Salary and Benefits * Salary/Rate: $90,000 - $125,000 * Medical, dental, and vision insurance ...

Controller - Nonprofit

Houston, TX · On-site

$90K - $125K/yr

A bit about the role: We're seeking a strategic Nonprofit Controller to lead the quality of client ... Salary and Benefits * Salary/Rate: $90,000 - $125,000 * Medical, dental, and vision insurance ...

Controller

Indianapolis, IN · Hybrid

$110K - $125K/yr

Controller Salary: $110,000 - $125,000 Location: Indianapolis, IN (Hybrid - 3 days in office / 2 ... Use modern nonprofit systems including Sage Intacct and Salesforce * Take ownership of compliance ...

Controller

Dunwoody, GA · On-site

$120K - $130K/yr

Controller Salary: $120K-$130K Dunwoody, GA Why This Opportunity Stands Out for the Controller: • ... in a $30M+ nonprofit with diverse revenue streams • Influence financial strategy while staying ...

Controller Salary: $75,000-$90,000 Why This Opportunity Stands Out: • Newly created leadership role with direct exposure to the CEO and Board of Directors • Join a growing nonprofit expanding its ...

Interim Controller

Washington, DC · Hybrid

$145K - $148K/yr

Join a respected multi-state nonprofit as an Interim Controller, partnering directly with executive ... Interim Controller Interim Controller Salary: $145,000 - $148,000 Why This Opportunity Stands Out ...

Controller

New York, NY · On-site

$120K - $135K/yr

Controller Salary: $120,000.00-$135,000.00 Why This Opportunity Stands Out: • Join a purpose-driven nonprofit where finance plays a critical role in advancing the organization's mission. • ...

Assistant Controller

Indianapolis, IN · On-site

$80K - $1M/yr

If you are a detail-oriented individual with a passion for non-profit organizations and a strong background in finance, we encourage you to apply. Title: Assistant Controller Salary: $80,000-$100 ...

Controller (Non‑Profit) Indianapolis, IN Hybrid schedule (up to 2 days work from home) $95,000 - $120,000 base salary (flexible based on experience and nonprofit complexity) A mission‑driven ...

Controller Salary Range: 65,000- 80,000 Job Overview We are seeking a detail-oriented ... Provide technical accounting guidance on complex transactions involving governmental or non-profit ...

Controller

Plymouth Meeting, PA · On-site

$110K - $130K/yr

Controller Salary: $110,000-$130,000 Location: Hybrid - Plymouth Meeting, PA Overview LHH Recruitment Solutions is partnering with a large, well-established nonprofit organization providing ...

Controller Salary: $110,000-$130,000 Location: Hybrid - Plymouth Meeting, PA Overview LHH Recruitment Solutions is partnering with a large, well-established nonprofit organization providing ...

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Non Profit Controller Salary information

See salary details

$55K

$119.5K

$175.5K

How much do non profit controller salary jobs pay per year?

As of Aug 13, 2026, the average yearly pay for non profit controller salary in the United States is $119,497.00, according to ZipRecruiter salary data. Most workers in this role earn between $97,000.00 and $138,500.00 per year, depending on experience, location, and employer.

What is the difference between Non Profit Controller Salary vs Non Profit Financial Analyst?

AspectNon Profit ControllerNon Profit Financial Analyst
Required CredentialsCPA or equivalent, accounting degreeFinance or accounting degree, certifications like CFA or CPA beneficial
Work EnvironmentFinance department, senior managementFinance team, project-based roles
Employer & Industry UsageNon profit organizations, charities, foundationsNon profit organizations, grant-funded agencies

The Non Profit Controller typically holds more advanced credentials and oversees financial operations, resulting in higher salaries compared to the Non Profit Financial Analyst, who focuses on financial analysis and reporting. Both roles are essential in non profit finance but differ in responsibilities and compensation levels.

What does a non profit controller do for a non-profit?

A non-profit controller manages the organization’s financial activities, including accounting, budgeting, financial reporting, and internal controls. They ensure compliance with regulations, oversee audits, and often use accounting software like QuickBooks or Sage to maintain accurate financial records.
More about Non Profit Controller Salary jobs
What cities are hiring for Non Profit Controller Salary jobs? Cities with the most Non Profit Controller Salary job openings:
What states have the most Non Profit Controller Salary jobs? States with the most job openings for Non Profit Controller Salary jobs include:
What job categories do people searching Non Profit Controller Salary jobs look for? The top searched job categories for Non Profit Controller Salary jobs are:
Infographic showing various Non Profit Controller Salary job openings in the United States as of August 2026, with employment types broken down into 88% Full Time, 10% Part Time, and 2% Contract. Highlights an 91% Physical, 3% Hybrid, and 6% Remote job distribution, with an average salary of $119,497 per year, or $57.5 per hour.

Full-time

Re-posted 9 days ago


Job description

Job Type
Full-time
Description
The National Network of Public Health Institutes (NNPHI) is an active network comprised of over forty-member public health institutes located throughout all ten Health and Human Services regions. NNPHI also serves as the National Coordinating Center for Public Health Training (NCCPHT) and hosts an affiliate network of Regional Public Health Training Centers (Regional PHTCs) serving all fifty states and US territories. Public health institutes (PHIs) are nonprofit organizations that improve the public's health by fostering innovation, leveraging resources, and building partnerships across sectors, including government agencies, communities, the health care delivery system, media, and academia. NNPHI and its member institutes work together to implement public health policy and program initiatives throughout the nation. NNPHI offices are located in New Orleans and Washington, DC.
The NNPHI mission is to support national public health system initiatives and strengthen public health institutes to promote multi-sector activities resulting in measurable improvements of public health structures, systems, and outcomes. NNPHI's vision is innovation-fostering public health institutes across the nation collaborating to improve population health.
NNPHI collaborates with its member public health institutes and a wide range of national, state, tribal, and local partners to support public health initiatives. These collaborative efforts promote health equity, support public health and health systems collaboration, build the capacity of the public health system, encourage health in all policies, and promote evidence-based public health practice. Additional information about NNPHI's program areas and collaborative efforts with public health institutes is available at www.nnphi.org.
Position Summary:
We are seeking a highly skilled and experienced Nonprofit Controller to join our team. The ideal candidate will have a strong background in financial management, budgeting, and grant accounting and experience working within the nonprofit sector. As the Nonprofit Controller, you will be responsible for overseeing the financial operations of the organization, managing a substantial operating budget, and ensuring compliance with all relevant private and governmental regulatory requirements.
Primary Responsibilities:
• Manage and oversee the organization's operational budget, ranging from $25,000,000 to$75,000,000, ensuring fiscal responsibility and strategic allocation of resources.
• Provide leadership and direction to the Finance team, including hiring, training, and performance management.
• Prepare and analyze financial reports, forecasts, and projections to inform decision-making and ensure the financial health of the organization.
• Coordinate the annual audit process, including preparing for and facilitating the federal single audit and IRS 990 filings.
• Oversee grant accounting activities, including budgeting, reporting, and compliance with grant requirements.
• Develop and implement financial policies, procedures, and internal controls to safeguard assets and ensure compliance with regulatory standards and best practices.
• Collaborate with NNPHI's directors and their portfolio to support organizational goals and initiatives, providing financial insights and recommendations as needed.
• Stay updated on current trends and best practices in nonprofit finance and accounting.
Requirements
Bachelor's degree in accounting, finance, or a related field; CPA Required .
• Minimum of 5 years of experience in financial management, with specific experience in nonprofit-accounting and grant management.
• Strong knowledge of GAAP and nonprofit accounting principles.
• Proven experience managing large operational budgets and overseeing financial operations in a complex organization.
• Experience preparing IRS Form 990 and coordinating federal single audits.
• Excellent leadership and interpersonal skills, with the ability to work effectively with diverse stakeholders.
Excellent communication skills, both verbal and written, with the ability to work well with others in a team environment.
• Detail-oriented with strong analytical and problem-solving abilities.
• Proficiency in accounting software systems and Microsoft Excel. Experience working with Sage Intacct is a plus.
Salary Description
Salary dependent on education and experience.