... Nextflow, Snakemake) and applying sound data organization and metadata practices • Demonstrated ability to champion cross-functional efforts in close collaboration with experimental scientists ...
... Nextflow, Snakemake) and applying sound data organization and metadata practices • Demonstrated ability to champion cross-functional efforts in close collaboration with experimental scientists ...
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Quick apply
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Senior Scientist I, Data Science (Cambridge)
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well‑documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices. * Demonstrated ability to champion ...
Senior Scientist I, Data Science (Cambridge)
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well‑documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices. * Demonstrated ability to champion ...
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Bioinformatics Scientist
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required. * Sequencing Data:
Senior Scientist I, Data Science (Cambridge)
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well‑documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices. * Demonstrated ability to champion ...
Senior Scientist I, Data Science (Cambridge)
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well‑documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices. * Demonstrated ability to champion ...
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Quick apply
Bioinformatics Scientist
Boston, MA · On-site
$170K - $190K/yr
Significant, hands-on experience with Nextflow and Docker is critical for pipeline development. Proficiency with standard bioinformatics tooling (Python, Linux, Git) is required.Sequencing Data:
Senior Scientist I, Data Science
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well-documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices * Demonstrated ability to champion cross ...
Senior Scientist I, Data Science
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well-documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices * Demonstrated ability to champion cross ...
Senior Bioinformatics Scientist
Boston, MA · On-site
$140 - $200/hr
Nextflow or Snakemake), containers, and version control. * Experience applying state-of-the-art large language models (LLMs) to bioinformatics projects. * Excellent organizational and documentation ...
Senior Bioinformatics Scientist
Boston, MA · On-site
$140 - $200/hr
Nextflow or Snakemake), containers, and version control. * Experience applying state-of-the-art large language models (LLMs) to bioinformatics projects. * Excellent organizational and documentation ...
Senior Bioinformatics Scientist
Boston, MA · On-site
$150 - $210/hr
Nextflow or Snakemake), containers, and version control. * Experience applying state‑of‑the‑art large language models (LLMs) to bioinformatics projects. * Excellent organizational and ...
Senior Bioinformatics Scientist
Boston, MA · On-site
$150 - $210/hr
Nextflow or Snakemake), containers, and version control. * Experience applying state‑of‑the‑art large language models (LLMs) to bioinformatics projects. * Excellent organizational and ...
Senior Scientist I, Data Science
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well-documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices * Demonstrated ability to champion cross ...
Senior Scientist I, Data Science
Cambridge, MA · On-site
$130K - $170K/yr
Experience building reproducible and well-documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices * Demonstrated ability to champion cross ...
Bioinformatics Leader
Boston, MA · On-site
$200K - $229K/yr
Deep, hands-on proficiency in bioinformatics tools and programming languages (e.g., Python, R, Nextflow, Snakemake) and experience with cloud-based compute environments * Domain expertise in at least ...
Bioinformatics Leader
Boston, MA · On-site
$200K - $229K/yr
Deep, hands-on proficiency in bioinformatics tools and programming languages (e.g., Python, R, Nextflow, Snakemake) and experience with cloud-based compute environments * Domain expertise in at least ...
Associate Director, Translational Data Science, Hematology R&D
Medical
Dental
Vision
Retirement
PTO
Proficiency with scalable and cloud-based analytics (e.g., AWS, GCP, or Azure), workflow orchestration (e.g., Nextflow, Snakemake, Airflow), and containerization (Docker). * Familiarity with data ...
New
Associate Director, Translational Data Science, Hematology R&D
Medical
Dental
Vision
Retirement
PTO
Proficiency with scalable and cloud-based analytics (e.g., AWS, GCP, or Azure), workflow orchestration (e.g., Nextflow, Snakemake, Airflow), and containerization (Docker). * Familiarity with data ...
New
Principal Software Engineer - GATK
Cambridge, MA · On-site
$150K - $210K/yr
Medical
Dental
Vision
Life
Retirement
PTO
Experience writing, testing, and deploying bioinformatics workflows in WDL or NextFlow. * Deep working knowledge of genomics/bioinformatics: sequencing data and core file formats (BAM/CRAM/VCF/BCF ...
Principal Software Engineer - GATK
Cambridge, MA · On-site
$150K - $210K/yr
Medical
Dental
Vision
Life
Retirement
PTO
Experience writing, testing, and deploying bioinformatics workflows in WDL or NextFlow. * Deep working knowledge of genomics/bioinformatics: sequencing data and core file formats (BAM/CRAM/VCF/BCF ...
Familiarity with Git-based development, Agile practices, bioinformatics workflow tools such as Cromwell or Nextflow, and AI-assisted coding tools is preferred, along with a strong interest in ...
Familiarity with Git-based development, Agile practices, bioinformatics workflow tools such as Cromwell or Nextflow, and AI-assisted coding tools is preferred, along with a strong interest in ...
Associate Director, Translational Data Science, Hematology R&D
Waltham, MA · On-site
Medical
Dental
Vision
Retirement
PTO
Proficiency with scalable and cloud-based analytics (e.g., AWS, GCP, or Azure), workflow orchestration (e.g., Nextflow, Snakemake, Airflow), and containerization (Docker). * Familiarity with data ...
New
Associate Director, Translational Data Science, Hematology R&D
Waltham, MA · On-site
Medical
Dental
Vision
Retirement
PTO
Proficiency with scalable and cloud-based analytics (e.g., AWS, GCP, or Azure), workflow orchestration (e.g., Nextflow, Snakemake, Airflow), and containerization (Docker). * Familiarity with data ...
New
Bioinformatics Software Engineer
Boston, MA · On-site
$112K - $132K/yr
Familiarity with Git-based development, Agile practices, bioinformatics workflow tools such as Cromwell or Nextflow, and AI-assisted coding tools is preferred, along with a strong interest in ...
Bioinformatics Software Engineer
Boston, MA · On-site
$112K - $132K/yr
Familiarity with Git-based development, Agile practices, bioinformatics workflow tools such as Cromwell or Nextflow, and AI-assisted coding tools is preferred, along with a strong interest in ...
Nextflow information
What are popular job titles related to Nextflow jobs in Boston, MA?
For Nextflow jobs in Boston, MA, the most frequently searched job titles are:
What job categories do people searching Nextflow jobs in Boston, MA look for?
The top searched job categories for Nextflow jobs in Boston, MA are:

Full-time
Re-posted 18 days ago
Job description
Sail Biomedicines is building a new class of fully programmable medicines by integrating circular RNA (eRNA™), targeted nanoparticle delivery, and advanced computational approaches. The Senior Scientist I will operate at the interface of platform and program, applying data-driven approaches to analyze preclinical datasets and support therapeutic development efforts.
Responsibilities:
• Perform in-depth analysis of preclinical and platform datasets, including immunophenotyping, functional assays, and multi-omics data to support both therapeutic programs and platform development
• Integrate and interpret data across studies and contexts to generate biological insights that inform CAR activity, persistence, immune dynamics and platform-level understanding of our therapeutics
• Collaborate closely with immunology and platform teams to inform experimental design and interpret results
• Work resourcefully with internal/external datasets to contextualize findings and strengthen conclusions
• Apply statistical and systems modeling to develop deeper understanding of product and platform attributes and performance.
• Apply and promote best practices in data structuring, annotation, and metadata usage to enable reliable, scalable and reusable downstream analysis across programs and platform efforts
• Develop and maintain reproducible analysis workflows, with clear documentation and version control (Git) and contribute to a well-organized data environment by following FAIR-aligned practices in day-to-day work
• Communicate findings clearly with collaborators through visualizations, presentations, and written summaries
Qualifications:
Required:
• Ph.D. in Computational Biology, Bioinformatics, Systems Biology, Biophysics or related field
• 3+ years of experience analyzing multifaceted biological datasets in biotech, pharma, or academia
• Firsthand experience working in CAR-T or RNA therapeutics.
• Demonstrated experience applying modeling (statistical, system) to biological data.
• Strong expertise in high-dimensional data analysis (e.g., RNA-seq, single-cell, in vivo studies) with the ability to transform raw data to refined downstream biological interpretations
• Proficiency in Python and/or R, with strong data analysis and visualization skills and a firm grasp of modern statistics (mixed models, Bayesian methods, etc.)
• Experience building reproducible and well-documented analysis workflows (Nextflow, Snakemake) and applying sound data organization and metadata practices
• Demonstrated ability to champion cross-functional efforts in close collaboration with experimental scientists, taking ownership and driving insights even in areas outside your core subject matter expertise
Preferred:
• Computational design of Antibody/VHH/scFv/CAR proteins
• Experience in immunology, cell therapy, or CAR biology, particularly in vivo systems
• Experience integrating complex datasets and cross-study meta-analysis
• Exposure to cloud-based or collaborative data environments
• Track record of impactful scientific contributions (publications or program support)
Company:
Sail Biomedicines is a flagship pioneering company that is developing tomorrow's medicines today using life's language. Founded in 2023, the company is headquartered in Somerville, USA, with a team of 51-200 employees. The company is currently Growth Stage.