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Bioinformatics Assistant Jobs in Boston, MA (NOW HIRING)

Harvard University

Research Assistant I

Boston, MA · On-site

$52/hr

... using standard bioinformatics tools. The candidate will also contribute to downstream ... The Research Assistant will maintain rigorous electronic laboratory records, contribute to the ...

Harvard University

Research Assistant I

Boston, MA

$21 - $28.75/hr

... using standard bioinformatics tools. The candidate will also contribute to downstream ... The Research Assistant will maintain rigorous electronic laboratory records, contribute to the ...

BostonGene

Scientist/Sr. Scientist - NGS

Waltham, MA · On-site

... bioinformatics teams. The candidate will be expected to support NGS protocols, such as RNA and DNA ... Execute and assist with validation studies, bridging studies, and technical reports. * Stay ...

Cambridge Computer Services, Inc

Sales Support

Waltham, MA · On-site +1

$80K/yr

... bioinformatics, and life sciences among others. * Understand and execute corporate and sales ... Having this skill could assist in scaling to future positions. * Cambridge employees are self-paced ...

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Bioinformatics Assistant information

What is a bioinformatics assistant?

Bioinformatics Assistants are professionals who support bioinformatics projects by managing, analyzing, and interpreting biological data using computational tools and software. They often work under the supervision of bioinformaticians or researchers, assisting with tasks such as data entry, quality control, running basic analyses, and maintaining databases. Their work is essential in fields like genomics, proteomics, and biomedical research, where large datasets need to be processed efficiently. A Bioinformatics Assistant typically has a background in biology, computer science, or a related field, and is familiar with common bioinformatics software and programming languages.

What are the key skills and qualifications needed to thrive as a bioinformatics assistant, and why are they important?

A Bioinformatics Assistant needs a solid background in biology, statistics, and programming, often supported by a degree in bioinformatics or a related field. Familiarity with tools like Python, R, BLAST, and data analysis platforms, as well as experience working with genomic databases, is typically required. Strong problem-solving skills, attention to detail, and effective communication are important soft skills for this role. These competencies enable accurate data analysis, efficient collaboration with research teams, and the generation of meaningful biological insights.

How does a bioinformatics assistant typically collaborate with researchers and other team members on projects?

As a Bioinformatics Assistant, you will work closely with researchers, data scientists, and laboratory personnel to support ongoing projects. Your primary role often involves processing and analyzing large-scale biological data, helping translate raw datasets into meaningful insights. Collaboration usually entails regular meetings to discuss project goals, troubleshooting analysis pipelines, and integrating feedback from team members. Strong communication skills and a willingness to adapt to evolving project needs are essential for success in this dynamic and interdisciplinary environment.
What are the most commonly searched types of Bioinformatics jobs in Boston, MA? The most popular types of Bioinformatics jobs in Boston, MA are:
What are popular job titles related to Bioinformatics Assistant jobs in Boston, MA? For Bioinformatics Assistant jobs in Boston, MA, the most frequently searched job titles are:
What job categories do people searching Bioinformatics Assistant jobs in Boston, MA look for? The top searched job categories for Bioinformatics Assistant jobs in Boston, MA are:
What cities near Boston, MA are hiring for Bioinformatics Assistant jobs? Cities near Boston, MA with the most Bioinformatics Assistant job openings:
Bioinformatics Assistant jobs near you
Infographic showing various Bioinformatics Assistant job openings in Boston, MA as of June 2026, with employment types broken down into 1% As Needed, 87% Full Time, 6% Part Time, and 6% Contract. Highlights an 82% Physical, 2% Hybrid, and 16% Remote job distribution.

Technician, Sequencing & Bioinformatics - Genome Core (Relocation Assistance Available!)

Whitehead Institute

Cambridge, MA • On-site

Full-time

Re-posted 18 days ago

Job description

Classification:
Exempt
Job Family:
Core Facilities
Reports to:
Director Genome Technology Core
Job Description Summary:
OVERALL RESPONSIBILITY
The Genomics Technology Core Technician serves as a central point of expertise for sequencing and analytical operations. This role bridges wet-lab execution and computational analysis, supporting both short- and long-read sequencing workflows. The Technician will help internal and external clients on sequencing technologies, guide project design, manage client communication, and deliver rigorous data pre-processing, quality control, and downstream analysis. Will contribute to hands-on support in the laboratory as needed.
CHARACTERISTIC DUTIES
  • Advise clients on appropriate sequencing technologies (short-read, long-read, single-cell, spatial) and help define project parameters, expected outputs, and deliverables.
  • Perform primary NGS data processing including demultiplexing, alignment, and quality assessment (FastQC, MultiQC, etc.).
  • Conduct secondary analysis as required, including variant calling, differential expression, or genome assembly depending on project needs.
  • Develop and maintain reproducible analysis pipelines.
  • Use and update LIMS and genomics databases to track samples, datasets, and project metadata.
  • Communicate effectively with researchers at all levels to ensure deliverables meet scientific objectives.
  • Document protocols, analysis workflows, and results clearly for both technical and non-technical audiences.
  • Assist with NGS related services, quality control (Bioanalyzer, TapeStation, Qubit), and sequencer operation as needed.
  • Contribute to continuous improvement of core facility processes and standard operating procedures.
  • Other tasks, as required.

QUALIFICATIONS
Required
  • BS in Molecular Biology, Bioinformatics, Computational Biology, or a related field; or equivalent experience.
  • 3+ years of relevant hands-on experience.
  • Demonstrated expertise coordinating NGS workflows including short-read (e.g., Illumina, Elements) and long-read (e.g., Oxford Nanopore, PacBio) sequencing platforms.
  • Demonstrated expertise in single cell technologies.
  • Experience advising researchers or clients on sequencing technology selection and experimental design.
  • Proficiency with NGS data pre-processing and quality control tools (e.g., Trimmomatic, MultiQC, Samtools, CellRanger).
  • Familiarity with common bioinformatics data analysis workflows.
  • Command-line proficiency in a Linux/Unix environment; ability to write and maintain analysis scripts in Python.
  • Experience with genomics databases and data management (e.g., LIMS, SQL or similar).
  • Excellent interpersonal and written communication skills; demonstrated ability to manage external client relationships.
  • Strong organizational skills and attention to detail in a high-throughput service environment.
  • Willingness to contribute to bench-level laboratory work when scientific or operational needs arise.

Preferred
  • Familiarity with spatial biology techniques.
  • Familiarity with laboratory automation for liquid handling.
  • Experience with workflow management systems (e.g., Snakemake, Nextflow) and version control (Git).
  • Exposure to cloud computing environments or HPC clusters for large-scale data analysis.

Whitehead provides pay ranges representing its good faith estimate of what the Institute reasonably expects to pay for a position at the time of posting. The pay offered to a selected candidate during hiring will be based on factors such as (but not limited to) the scope and responsibilities of the position, the candidate's work experience and education/training, and internal peer equity. This pay range represents base pay only and does not include any other benefits or compensation.
  • Pay Range Minimum: 65,000
  • Pay Range Maximum: 90,000

Whitehead Institute is an E-Verify employer
https://www.e-verify.gov/sites/default/files/everify/posters/EVerifyParticipationPoster.pdf
https://www.e-verify.gov/sites/default/files/everify/posters/IER_RightToWorkPoster%20Eng_Es.pdf

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