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Clinical Microbiologist Jobs (NOW HIRING)

Our mission is to reinvent the clinical microbiology lab using our novel, game-changing technology. To fulfill our mission and build world-changing technology, we value having a team with diverse ...

The Microbiologist 2 specific duties are as follows: * Support the AMD Coordinator in the ... Perform nucleic acid extraction of clinical isolates for use in various molecular testing ...

CLS/Micro

Los Angeles, CA · On-site

$55 - $62/hr

The CLS Microbiologist plays a critical role in advancing microbiological research and analysis through the use of confocal laser scanning microscopy (CLSM). This per diem variable position focuses ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

The Microbiologist 2 specific duties are as follows: * Support the AMD Coordinator in the ... Perform nucleic acid extraction of clinical isolates for use in various molecular testing ...

New

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

Clinical Microbiologist - California Department of Public Health * Or * Clinical Microbiologist Scientist - California Department of Public Health * Or * CLS - Clinical Laboratory Scientist License ...

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Clinical Microbiologist information

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$28

$37

$49

How much do clinical microbiologist jobs pay per hour?

As of Jul 18, 2026, the average hourly pay for clinical microbiologist in the United States is $37.44, according to ZipRecruiter salary data. Most workers in this role earn between $32.93 and $39.90 per hour, depending on experience, location, and employer.

What does a Clinical Microbiologist do?

A Clinical Microbiologist is a laboratory professional who specializes in identifying and studying microorganisms such as bacteria, viruses, fungi, and parasites that cause infections in humans. They perform tests on samples like blood, urine, and tissue to diagnose infectious diseases, guide treatment decisions, and monitor outbreaks. Clinical Microbiologists also work closely with healthcare providers to ensure accurate diagnoses and may contribute to infection control and public health efforts.

What field of microbiology pays the most?

Within microbiology, clinical microbiologists working in specialized areas such as infectious disease diagnostics or research tend to earn higher salaries, especially with advanced certifications and experience. Fields like industrial microbiology or biotechnology also offer higher pay due to their application in manufacturing and product development. Salaries vary based on location, education, and level of responsibility.

What Is a Clinical Microbiologist?

A clinical microbiologist oversees the collection, transportation, and analysis of biological samples. Job duties include testing various microorganisms, bacteria, fungi, and viral material. Clinical microbiologists work closely with epidemiologists and other clinical biologists to track, assess, and determine the features of various infectious diseases and outbreaks. Outside of the lab, they may work with health care professionals, researchers, and public officials to brief the public and other interested parties about the spread of infectious disease and prevention methods.

How much do clinical microbiologists make?

Clinical microbiologists typically earn a median annual salary of around $70,000 to $90,000, with experienced professionals and those in supervisory roles earning higher. Salaries can vary based on location, education, certifications, and work setting such as hospitals or laboratories.

What is the difference between Clinical Microbiologist vs Medical Laboratory Technician?

AspectClinical MicrobiologistMedical Laboratory Technician
CredentialsMaster's or Doctorate in Microbiology, certification (e.g., ASCP)Associate's degree or certification in laboratory technology
Work EnvironmentHospitals, diagnostic labs, research facilitiesHospital labs, clinics, diagnostic centers
Job FocusIdentifying pathogens, research, overseeing microbiology testingPerforming routine tests, preparing samples, operating lab equipment

Clinical Microbiologists and Medical Laboratory Technicians both work in laboratory settings, but Clinical Microbiologists focus on pathogen identification, research, and overseeing microbiology testing, requiring advanced degrees and certifications. Medical Laboratory Technicians perform routine testing and sample preparation, typically with an associate's degree. Both roles are essential in healthcare diagnostics but differ in responsibilities and qualifications.

Are clinical microbiologists in demand?

Clinical microbiologists are in steady demand due to the ongoing need for diagnostic testing and infectious disease management in healthcare settings. Employment opportunities are expected to grow as laboratories expand and new technologies, such as molecular diagnostics, become more prevalent. Certification and specialized skills can enhance job prospects in this field.

What are the key skills and qualifications needed to thrive as a Clinical Microbiologist, and why are they important?

To thrive as a Clinical Microbiologist, you need expertise in microbiological techniques, laboratory safety, and disease diagnostics, usually supported by at least a bachelor's degree in microbiology or a related field (with many roles requiring a master's or PhD). Familiarity with laboratory information management systems (LIMS), automated analyzers, and certifications such as ASCP are often required. Strong analytical thinking, attention to detail, and effective communication enable success in interpreting results and collaborating with healthcare teams. These skills ensure accurate pathogen identification, contribute to patient care, and uphold laboratory quality standards.

What do clinical microbiologists do?

Clinical microbiologists analyze clinical specimens to identify bacteria, viruses, fungi, and parasites that cause disease. They perform laboratory tests, interpret results, and help guide treatment decisions, often working with advanced microbiology techniques and maintaining quality control in a laboratory setting.

What are some common challenges clinical microbiologists face when interpreting laboratory results?

Clinical microbiologists often encounter challenges such as distinguishing between contamination and true infection, especially when dealing with samples that can contain normal flora. They must also stay up to date with emerging pathogens and antibiotic resistance patterns, which can complicate diagnosis and treatment recommendations. Effective communication with physicians and other healthcare professionals is crucial to ensure that laboratory findings are accurately interpreted in the context of the patient's clinical presentation.
What cities are hiring for Clinical Microbiologist jobs? Cities with the most Clinical Microbiologist job openings:
What are the most commonly searched types of Clinical Microbiologist jobs? The most popular types of Clinical Microbiologist jobs are:
What states have the most Clinical Microbiologist jobs? States with the most job openings for Clinical Microbiologist jobs include:
Infographic showing various Clinical Microbiologist job openings in the United States as of July 2026, with employment types broken down into 3% As Needed, 72% Full Time, 18% Part Time, and 7% Contract. Highlights an 95% Physical, 1% Hybrid, and 4% Remote job distribution, with an average salary of $77,874 per year, or $37.4 per hour.
Head of Scientific & Medical Affairs

Other

Medical, Retirement, PTO

Re-posted 20 days ago


Job description

At Pattern Bioscience, we're tackling antibiotic resistance, one of the biggest public health challenges of our time.  We use machine learning and microfluidics to quickly identify the bacteria causing an infection and to predict which drugs will cure the infection. Our mission is to reinvent the clinical microbiology lab using our novel, game-changing technology. 

To fulfill our mission and build world-changing technology, we value having a team with diverse, multi-discipline perspectives who demonstrate the desire to make a difference, be a great teammate, and operate with a strong sense of independence and ownership. 

We are seeking a Scientific and Medical Affairs lead to serve as Pattern's scientific voice to the clinical microbiology community and to build the foundation of our scientific affairs function. You will deliver scientific and medical content that supports Pattern's product launch, building relationships with the clinical microbiology, infectious disease, pharmacy, and critical care communities, and ensuring Pattern's science is communicated with rigor and impact. This role is for you if you are passionate about translating complex science into compelling, customer-facing content and are excited to be the person who brings Pattern's story to the scientific world. 

How You Will Contribute 

Immediate Priorities: 

  • Design, write, and present scientific posters and podium presentations for key conferences (ASM Microbe, ESCMID Global, IDSA IDWeek, ADLM, and others) 
  • Lead the writing and submission of peer-reviewed scientific publications that communicate Pattern's technology, clinical validation data, and clinical utility 
  • Own the scientific and medical affairs strategy, study and publications plan, budget and timeline 
  • Create customer-facing scientific and technical documents to support the commercial launch of Pattern's Pneumonia ID/AST Panel, including white papers, technical briefs, application notes, verification protocols and templates, and FAQs 
  • Develop training materials for future customers, including clinical workflow guides, result interpretation resources, and educational content for laboratory personnel 
  • Develop scientific education and evidence translation strategies that support multidisciplinary adoption across laboratory, antimicrobial stewardship, infectious disease, critical care, and pharmacy stakeholders 
  • Support protocol generation for investigator-initiated studies (IIS), including scientific review, study design consultation, and manuscript development support 
  • Serve as an internal microbiology subject matter expert, supporting R&D, clinical affairs, regulatory, and commercial teams with scientific input and review 
  • Build and manage Pattern's Scientific and Medical Advisory Board. Build and maintain relationships with key opinion leaders in clinical microbiology, infectious disease, antimicrobial stewardship, and related fields 

Other Opportunities: 

  • Represent Pattern at scientific conferences, advisory boards, and KOL engagements as a credible scientific voice 
  • Monitor and synthesize the scientific literature in clinical microbiology, antimicrobial resistance, and rapid diagnostics to inform company strategy and competitive positioning 
  • Lead the development of health-economic and clinical utility narratives in collaboration with commercial and clinical affairs teams 
  • Support the review and development of IFUs, product labeling, and marketing claims to ensure scientific accuracy 
  • As the function grows, help define the future scope and structure of Scientific and Medical Affairs at Pattern 

We'd Love to Hear from You If You 

  • Are a clinical microbiologist at heart who can translate complex bacteriology, AST, and resistance concepts into clear, compelling scientific content
  •  Excel at scientific writing and have a track record of peer-reviewed publications, conference presentations, and technical documentation 
  • Thrive as an independent contributor who can own projects end to end without a large team or established playbook
  • Are comfortable wearing multiple hats and switching between conference posters, customer training materials, and internal scientific review
  • Build strong relationships with the clinical microbiology and infectious diseases community 
  • Foster cross-functional collaboration and bring scientific rigor to commercial, regulatory, and clinical conversations
  • Are energized by the mission of combating antimicrobial resistance and excited to shape how a novel technology is communicated to the world

Desired Education and Experience 

  • PhD in microbiology, molecular biology, or related discipline required. D(ABMM) certification or equivalent strongly preferred. 
  • Minimum of 7 years of experience in clinical microbiology, either in a clinical laboratory setting (e.g., medical director, clinical microbiologist) or in a scientific/medical affairs role at a diagnostics company. 
  • Deep domain knowledge in bacteriology, antimicrobial susceptibility testing, culture-based methods, and antimicrobial stewardship.
  • Demonstrated track record of scientific publications in peer-reviewed journals and presentations at major microbiology and infectious disease conferences.
  • Experience creating customer-facing scientific content, including white papers, technical briefs, training materials, and application notes.
  • Experience supporting or managing investigator-initiated studies preferred.
  • Experience in the diagnostics industry (IVD) preferred; experience at an early-stage or startup company is a plus.
  • Familiarity with FDA regulatory requirements for IVD products and experience supporting regulatory submissions with scientific content is a plus.

Join us! We're excited for what you can bring to our team. Here are a few things we provide to make sure you have a great experience. Learn more about our team by visiting our website. 

Benefits 

  • Health Insurance
  • 401K
  • Paid Time Off
  • The opportunity to make a global impact

To fulfill our mission and build world-changing technology, we've put together a diverse, multi-disciplinary top-notch team, a culture of innovation, learning, adaptability, and excellence and environment where people love coming to work. 

We value diversity on our teams. All qualified applicants will receive consideration for employment without regard to race, religion, color, national origin, sex, sexual orientation, gender identity or expression, age, status as a qualified individual with disability, protected veteran status, or any other characteristic protected by law.Â